RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 C14orf37Q86TY3 774 aa18.39■□□□□ 0.53
COL18A1-206ENST00000459895 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
COL18A1-206ENST00000459895 UBAP1LF5GYI3 381 aa18.38■□□□□ 0.53
COL18A1-206ENST00000459895 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
COL18A1-206ENST00000459895 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
COL18A1-206ENST00000459895 TULP4Q9NRJ4 1543 aa18.38■□□□□ 0.53
COL18A1-206ENST00000459895 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-206ENST00000459895 PRAM1Q96QH2 718 aa18.37■□□□□ 0.53
COL18A1-206ENST00000459895 ITSN1Q15811 1721 aa18.37■□□□□ 0.53
COL18A1-206ENST00000459895 FBXO41Q8TF61 875 aa18.36■□□□□ 0.53
COL18A1-206ENST00000459895 KIF1AQ12756 1690 aa18.34■□□□□ 0.53
COL18A1-206ENST00000459895 SAFB2Q14151 953 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL18A1-206ENST00000459895 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
COL18A1-206ENST00000459895 PHLPP1O60346 1717 aa18.34■□□□□ 0.53
COL18A1-206ENST00000459895 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-206ENST00000459895 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
COL18A1-206ENST00000459895 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
COL18A1-206ENST00000459895 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.52
COL18A1-206ENST00000459895 COL16A1Q07092 1604 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-206ENST00000459895 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
COL18A1-206ENST00000459895 ATP7BP35670 1465 aa18.32■□□□□ 0.52
COL18A1-206ENST00000459895 TOM1O60784 492 aa18.31■□□□□ 0.52
COL18A1-206ENST00000459895 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
COL18A1-206ENST00000459895 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
COL18A1-206ENST00000459895 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
COL18A1-206ENST00000459895 POGKQ9P215 609 aa18.3■□□□□ 0.52
COL18A1-206ENST00000459895 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-206ENST00000459895 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-206ENST00000459895 ATF3P18847 181 aa18.29■□□□□ 0.52
COL18A1-206ENST00000459895 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
COL18A1-206ENST00000459895 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.52
COL18A1-206ENST00000459895 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-206ENST00000459895 USP47Q96K76 1375 aa18.27■□□□□ 0.51
COL18A1-206ENST00000459895 ILDR1Q86SU0 546 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-206ENST00000459895 SBNO2Q9Y2G9 1366 aa18.25■□□□□ 0.51
COL18A1-206ENST00000459895 SLAIN2Q9P270 581 aa18.24■□□□□ 0.51
COL18A1-206ENST00000459895 SHPRHQ149N8 1683 aa18.22■□□□□ 0.51
COL18A1-206ENST00000459895 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
COL18A1-206ENST00000459895 TRPM3Q9HCF6 1732 aaPredicted RBP18.22■□□□□ 0.51
COL18A1-206ENST00000459895 PRR36Q9H6K5 1346 aa18.22■□□□□ 0.51
COL18A1-206ENST00000459895 MYOM1P52179 1685 aa18.22■□□□□ 0.51
COL18A1-206ENST00000459895 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
COL18A1-206ENST00000459895 PXDNQ92626 1479 aa18.2■□□□□ 0.5
COL18A1-206ENST00000459895 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
COL18A1-206ENST00000459895 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
COL18A1-206ENST00000459895 WASLO00401 505 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-206ENST00000459895 HSPA1LP34931 641 aa18.18■□□□□ 0.5
COL18A1-206ENST00000459895 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
COL18A1-206ENST00000459895 ORAI2Q96SN7 254 aa18.17■□□□□ 0.5
COL18A1-206ENST00000459895 MON2Q7Z3U7 1717 aa18.16■□□□□ 0.5
COL18A1-206ENST00000459895 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
COL18A1-206ENST00000459895 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
COL18A1-206ENST00000459895 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
COL18A1-206ENST00000459895 DDX17Q92841 729 aaKnown RBP18.14■□□□□ 0.49
COL18A1-206ENST00000459895 CRYBG1Q9Y4K1 1723 aa18.14■□□□□ 0.49
COL18A1-206ENST00000459895 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
COL18A1-206ENST00000459895 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
COL18A1-206ENST00000459895 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
COL18A1-206ENST00000459895 TESK2Q96S53 571 aa18.13■□□□□ 0.49
COL18A1-206ENST00000459895 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
COL18A1-206ENST00000459895 EVC2Q86UK5 1308 aa18.12■□□□□ 0.49
COL18A1-206ENST00000459895 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
COL18A1-206ENST00000459895 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
COL18A1-206ENST00000459895 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
COL18A1-206ENST00000459895 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
COL18A1-206ENST00000459895 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
COL18A1-206ENST00000459895 PHF8Q9UPP1 1060 aa18.09■□□□□ 0.49
COL18A1-206ENST00000459895 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
COL18A1-206ENST00000459895 POLR3AO14802 1390 aaPredicted RBP18.08■□□□□ 0.49
COL18A1-206ENST00000459895 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.49
COL18A1-206ENST00000459895 PIK3C2AO00443 1686 aa18.08■□□□□ 0.48
COL18A1-206ENST00000459895 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
COL18A1-206ENST00000459895 MARF1Q9Y4F3 1742 aaKnown RBP18.07■□□□□ 0.48
COL18A1-206ENST00000459895 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
COL18A1-206ENST00000459895 LRP6O75581 1613 aa18.07■□□□□ 0.48
COL18A1-206ENST00000459895 CD163L1Q9NR16 1453 aa18.07■□□□□ 0.48
COL18A1-206ENST00000459895 SOS2Q07890 1332 aaPredicted RBP18.06■□□□□ 0.48
COL18A1-206ENST00000459895 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
COL18A1-206ENST00000459895 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
COL18A1-206ENST00000459895 PNPLA6Q8IY17 1366 aa18.05■□□□□ 0.48
COL18A1-206ENST00000459895 JCADQ9P266 1359 aa18.04■□□□□ 0.48
COL18A1-206ENST00000459895 FOXO3O43524 673 aa18.04■□□□□ 0.48
COL18A1-206ENST00000459895 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL18A1-206ENST00000459895 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
COL18A1-206ENST00000459895 USP6P35125 1406 aa18.03■□□□□ 0.48
COL18A1-206ENST00000459895 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.48
COL18A1-206ENST00000459895 KIF20BQ96Q89 1820 aa18.01■□□□□ 0.47
COL18A1-206ENST00000459895 SBNO1A3KN83 1393 aa18.01■□□□□ 0.47
COL18A1-206ENST00000459895 ACEP12821 1306 aa18■□□□□ 0.47
COL18A1-206ENST00000459895 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
COL18A1-206ENST00000459895 TMF1P82094 1093 aa18■□□□□ 0.47
COL18A1-206ENST00000459895 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
COL18A1-206ENST00000459895 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
COL18A1-206ENST00000459895 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
COL18A1-206ENST00000459895 NINLQ9Y2I6 1382 aa17.99■□□□□ 0.47
COL18A1-206ENST00000459895 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
COL18A1-206ENST00000459895 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
COL18A1-206ENST00000459895 PLCH1Q4KWH8 1693 aa17.97■□□□□ 0.47
COL18A1-206ENST00000459895 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
COL18A1-206ENST00000459895 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms