RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 MS4A1P11836 297 aa8.55□□□□□ -1.04
SSX2IP-204ENST00000459708 FOXC1Q12948 553 aa8.55□□□□□ -1.04
SSX2IP-204ENST00000459708 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
SSX2IP-204ENST00000459708 SCUBE3Q8IX30 993 aa8.54□□□□□ -1.04
SSX2IP-204ENST00000459708 PKD2L1Q9P0L9 805 aa8.54□□□□□ -1.04
SSX2IP-204ENST00000459708 GCGRP47871 477 aa8.53□□□□□ -1.04
SSX2IP-204ENST00000459708 RSPH4AQ5TD94 716 aa8.53□□□□□ -1.04
SSX2IP-204ENST00000459708 SPSB2Q99619 263 aa8.53□□□□□ -1.04
SSX2IP-204ENST00000459708 FUT2Q10981 343 aa8.52□□□□□ -1.05
SSX2IP-204ENST00000459708 BRPF1P55201 1214 aaPredicted RBP8.51□□□□□ -1.05
SSX2IP-204ENST00000459708 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
SSX2IP-204ENST00000459708 KDM4CQ9H3R0 1056 aa8.51□□□□□ -1.05
SSX2IP-204ENST00000459708 NEUROD2Q15784 382 aa8.5□□□□□ -1.05
SSX2IP-204ENST00000459708 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
SSX2IP-204ENST00000459708 BEGAINQ9BUH8 593 aa8.49□□□□□ -1.05
SSX2IP-204ENST00000459708 FCF1Q9Y324 198 aaKnown RBP8.49□□□□□ -1.05
SSX2IP-204ENST00000459708 KDM4AO75164 1064 aa8.48□□□□□ -1.05
SSX2IP-204ENST00000459708 HLA-CQ95604 372 aa8.48□□□□□ -1.05
SSX2IP-204ENST00000459708 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
SSX2IP-204ENST00000459708 RPIAP49247 311 aa8.47□□□□□ -1.05
SSX2IP-204ENST00000459708 CRIPAKQ8N1N5 446 aa8.47□□□□□ -1.05
SSX2IP-204ENST00000459708 HOXA2O43364 376 aa8.46□□□□□ -1.06
SSX2IP-204ENST00000459708 CYP4X1Q8N118 509 aa8.46□□□□□ -1.06
SSX2IP-204ENST00000459708 FAM117AQ9C073 453 aa8.46□□□□□ -1.06
SSX2IP-204ENST00000459708 TOR4AQ9NXH8 423 aa8.46□□□□□ -1.06
SSX2IP-204ENST00000459708 GMPR2Q9P2T1 348 aaKnown RBP8.46□□□□□ -1.06
SSX2IP-204ENST00000459708 AXIN1O15169 862 aa8.45□□□□□ -1.06
SSX2IP-204ENST00000459708 AVPP01185 164 aa8.45□□□□□ -1.06
SSX2IP-204ENST00000459708 MORN1Q5T089 497 aa8.45□□□□□ -1.06
SSX2IP-204ENST00000459708 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
SSX2IP-204ENST00000459708 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
SSX2IP-204ENST00000459708 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
SSX2IP-204ENST00000459708 USP46P62068 366 aa8.44□□□□□ -1.06
SSX2IP-204ENST00000459708 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
SSX2IP-204ENST00000459708 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
SSX2IP-204ENST00000459708 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
SSX2IP-204ENST00000459708 C11orf95C9JLR9 678 aaPredicted RBP8.43□□□□□ -1.06
SSX2IP-204ENST00000459708 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
SSX2IP-204ENST00000459708 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
SSX2IP-204ENST00000459708 SLC27A5Q9Y2P5 690 aa8.43□□□□□ -1.06
SSX2IP-204ENST00000459708 PLEKHG3A1L390 1219 aa8.42□□□□□ -1.06
SSX2IP-204ENST00000459708 WFS1O76024 890 aa8.42□□□□□ -1.06
SSX2IP-204ENST00000459708 FMNL1O95466 1100 aaPredicted RBP8.42□□□□□ -1.06
SSX2IP-204ENST00000459708 CTC1Q2NKJ3 1217 aa8.42□□□□□ -1.06
SSX2IP-204ENST00000459708 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
SSX2IP-204ENST00000459708 FAM160A2Q8N612 972 aaPredicted RBP8.41□□□□□ -1.06
SSX2IP-204ENST00000459708 TTC24A2A3L6 582 aaPredicted RBP8.4□□□□□ -1.06
SSX2IP-204ENST00000459708 NDUFV2P19404 249 aa8.4□□□□□ -1.06
SSX2IP-204ENST00000459708 GRIPAP1Q4V328 841 aa8.4□□□□□ -1.06
SSX2IP-204ENST00000459708 MYSM1Q5VVJ2 828 aa8.4□□□□□ -1.06
SSX2IP-204ENST00000459708 RNF19BQ6ZMZ0 732 aa8.4□□□□□ -1.06
SSX2IP-204ENST00000459708 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.06
SSX2IP-204ENST00000459708 PCDHGC3Q9UN70 934 aa8.39□□□□□ -1.07
SSX2IP-204ENST00000459708 ZBTB24O43167 697 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-204ENST00000459708 FDX1P10109 184 aa8.38□□□□□ -1.07
SSX2IP-204ENST00000459708 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-204ENST00000459708 RSBN1LQ6PCB5 846 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-204ENST00000459708 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-204ENST00000459708 LIMD1Q9UGP4 676 aa8.37□□□□□ -1.07
SSX2IP-204ENST00000459708 DIXDC1Q155Q3 683 aa8.36□□□□□ -1.07
SSX2IP-204ENST00000459708 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
SSX2IP-204ENST00000459708 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
SSX2IP-204ENST00000459708 SPTLC1O15269 473 aa8.35□□□□□ -1.07
SSX2IP-204ENST00000459708 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
SSX2IP-204ENST00000459708 SYMPKQ92797 1274 aaKnown RBP8.35□□□□□ -1.07
SSX2IP-204ENST00000459708 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
SSX2IP-204ENST00000459708 WNT7AO00755 349 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 SMPD1P17405 629 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 CLK2P49760 499 aaKnown RBP8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 Q3C1V9 767 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 RIC3Q7Z5B4 369 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 ATP13A2Q9NQ11 1180 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
SSX2IP-204ENST00000459708 WIPF1O43516 503 aa8.33□□□□□ -1.08
SSX2IP-204ENST00000459708 TRIM32Q13049 653 aa8.33□□□□□ -1.08
SSX2IP-204ENST00000459708 CSPP1Q1MSJ5 1256 aa8.33□□□□□ -1.08
SSX2IP-204ENST00000459708 SNIP1Q8TAD8 396 aaKnown RBP8.33□□□□□ -1.08
SSX2IP-204ENST00000459708 RSPH6AQ9H0K4 717 aa8.33□□□□□ -1.08
SSX2IP-204ENST00000459708 STK17AQ9UEE5 414 aa8.33□□□□□ -1.08
SSX2IP-204ENST00000459708 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
SSX2IP-204ENST00000459708 GJA5P36382 358 aa8.32□□□□□ -1.08
SSX2IP-204ENST00000459708 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-204ENST00000459708 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
SSX2IP-204ENST00000459708 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
SSX2IP-204ENST00000459708 J3QL48 77 aa8.31□□□□□ -1.08
SSX2IP-204ENST00000459708 QPCTQ16769 361 aa8.31□□□□□ -1.08
SSX2IP-204ENST00000459708 MRGPRX2Q96LB1 330 aa8.31□□□□□ -1.08
SSX2IP-204ENST00000459708 USB1Q9BQ65 265 aaKnown RBP8.31□□□□□ -1.08
SSX2IP-204ENST00000459708 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
SSX2IP-204ENST00000459708 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
SSX2IP-204ENST00000459708 HRCP23327 699 aa8.29□□□□□ -1.08
SSX2IP-204ENST00000459708 MTMR2Q13614 643 aa8.29□□□□□ -1.08
SSX2IP-204ENST00000459708 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
SSX2IP-204ENST00000459708 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
SSX2IP-204ENST00000459708 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
SSX2IP-204ENST00000459708 TERTO14746 1132 aaKnown RBP8.28□□□□□ -1.08
SSX2IP-204ENST00000459708 MMP16P51512 607 aa8.28□□□□□ -1.08
SSX2IP-204ENST00000459708 FBXO31Q5XUX0 539 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms