RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
PSMC6-202ENST00000458604 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
PSMC6-202ENST00000458604 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
PSMC6-202ENST00000458604 GCGRP47871 477 aa13.62□□□□□ -0.23
PSMC6-202ENST00000458604 USP46P62068 366 aa13.62□□□□□ -0.23
PSMC6-202ENST00000458604 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
PSMC6-202ENST00000458604 UCN2Q96RP3 112 aa13.62□□□□□ -0.23
PSMC6-202ENST00000458604 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
PSMC6-202ENST00000458604 GUCA2AQ02747 115 aa13.61□□□□□ -0.23
PSMC6-202ENST00000458604 LRRN4Q8WUT4 740 aa13.6□□□□□ -0.23
PSMC6-202ENST00000458604 HLA-CQ95604 372 aa13.6□□□□□ -0.23
PSMC6-202ENST00000458604 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
PSMC6-202ENST00000458604 SMAPO00193 183 aa13.58□□□□□ -0.24
PSMC6-202ENST00000458604 TMEM88BA6NKF7 163 aa13.57□□□□□ -0.24
PSMC6-202ENST00000458604 LMOD1P29536 600 aaPredicted RBP13.57□□□□□ -0.24
PSMC6-202ENST00000458604 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
PSMC6-202ENST00000458604 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
PSMC6-202ENST00000458604 TFIP11Q9UBB9 837 aaKnown RBP13.57□□□□□ -0.24
PSMC6-202ENST00000458604 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
PSMC6-202ENST00000458604 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
PSMC6-202ENST00000458604 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
PSMC6-202ENST00000458604 ZSWIM6Q9HCJ5 1215 aa13.56□□□□□ -0.24
PSMC6-202ENST00000458604 IVNS1ABPQ9Y6Y0 642 aa13.56□□□□□ -0.24
PSMC6-202ENST00000458604 ATG7O95352 703 aa13.55□□□□□ -0.24
PSMC6-202ENST00000458604 SLC10A3P09131 477 aa13.55□□□□□ -0.24
PSMC6-202ENST00000458604 PTPREP23469 700 aa13.55□□□□□ -0.24
PSMC6-202ENST00000458604 CFAP99D6REC4 459 aa13.54□□□□□ -0.24
PSMC6-202ENST00000458604 MTMR2Q13614 643 aa13.54□□□□□ -0.24
PSMC6-202ENST00000458604 ST18O60284 1047 aa13.53□□□□□ -0.24
PSMC6-202ENST00000458604 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
PSMC6-202ENST00000458604 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
PSMC6-202ENST00000458604 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
PSMC6-202ENST00000458604 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
PSMC6-202ENST00000458604 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
PSMC6-202ENST00000458604 SOX11P35716 441 aa13.5□□□□□ -0.25
PSMC6-202ENST00000458604 CCDC27Q2M243 656 aa13.5□□□□□ -0.25
PSMC6-202ENST00000458604 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
PSMC6-202ENST00000458604 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
PSMC6-202ENST00000458604 TSC1Q92574 1164 aa13.48□□□□□ -0.25
PSMC6-202ENST00000458604 AMOTL2Q9Y2J4 779 aa13.48□□□□□ -0.25
PSMC6-202ENST00000458604 E9PSI1 815 aa13.47□□□□□ -0.25
PSMC6-202ENST00000458604 RIMBP2O15034 1052 aa13.47□□□□□ -0.25
PSMC6-202ENST00000458604 IGSF3O75054 1194 aa13.46□□□□□ -0.25
PSMC6-202ENST00000458604 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.25
PSMC6-202ENST00000458604 TBC1D9Q6ZT07 1266 aa13.46□□□□□ -0.25
PSMC6-202ENST00000458604 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
PSMC6-202ENST00000458604 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
PSMC6-202ENST00000458604 NR6A1Q15406 480 aa13.44□□□□□ -0.26
PSMC6-202ENST00000458604 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
PSMC6-202ENST00000458604 GNEQ9Y223 722 aaKnown RBP13.43□□□□□ -0.26
PSMC6-202ENST00000458604 C6orf229H3BNL8 230 aa13.42□□□□□ -0.26
PSMC6-202ENST00000458604 SEMA3FQ13275 785 aa13.42□□□□□ -0.26
PSMC6-202ENST00000458604 KIAA1468Q9P260 1216 aa13.42□□□□□ -0.26
PSMC6-202ENST00000458604 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
PSMC6-202ENST00000458604 ATP9BO43861 1147 aa13.4□□□□□ -0.26
PSMC6-202ENST00000458604 FUT2Q10981 343 aa13.4□□□□□ -0.26
PSMC6-202ENST00000458604 KANK4Q5T7N3 995 aaPredicted RBP13.4□□□□□ -0.26
PSMC6-202ENST00000458604 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
PSMC6-202ENST00000458604 ELOAQ14241 798 aaKnown RBP13.37□□□□□ -0.27
PSMC6-202ENST00000458604 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
PSMC6-202ENST00000458604 ZMIZ1Q9ULJ6 1067 aa13.37□□□□□ -0.27
PSMC6-202ENST00000458604 SNPHO15079 494 aa13.36□□□□□ -0.27
PSMC6-202ENST00000458604 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
PSMC6-202ENST00000458604 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
PSMC6-202ENST00000458604 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
PSMC6-202ENST00000458604 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
PSMC6-202ENST00000458604 PIK3CDO00329 1044 aa13.33□□□□□ -0.28
PSMC6-202ENST00000458604 TMEM164Q5U3C3 297 aa13.33□□□□□ -0.28
PSMC6-202ENST00000458604 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
PSMC6-202ENST00000458604 NR1H3Q13133 447 aa13.32□□□□□ -0.28
PSMC6-202ENST00000458604 PHLDB3Q6NSJ2 640 aa13.32□□□□□ -0.28
PSMC6-202ENST00000458604 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
PSMC6-202ENST00000458604 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
PSMC6-202ENST00000458604 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
PSMC6-202ENST00000458604 SEPT9Q9UHD8 586 aaPredicted RBP13.31□□□□□ -0.28
PSMC6-202ENST00000458604 UNCXA6NJT0 531 aa13.3□□□□□ -0.28
PSMC6-202ENST00000458604 CFHP08603 1231 aa13.3□□□□□ -0.28
PSMC6-202ENST00000458604 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
PSMC6-202ENST00000458604 B4GALNT3Q6L9W6 998 aa13.3□□□□□ -0.28
PSMC6-202ENST00000458604 FBXO45P0C2W1 286 aa13.29□□□□□ -0.28
PSMC6-202ENST00000458604 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
PSMC6-202ENST00000458604 DESI1Q6ICB0 168 aa13.28□□□□□ -0.28
PSMC6-202ENST00000458604 RABGEF1Q9UJ41 708 aa13.28□□□□□ -0.28
PSMC6-202ENST00000458604 NFATC2IPQ8NCF5 419 aa13.27□□□□□ -0.29
PSMC6-202ENST00000458604 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
PSMC6-202ENST00000458604 SLAIN2Q9P270 581 aa13.26□□□□□ -0.29
PSMC6-202ENST00000458604 NOVA2Q9UNW9 492 aaKnown RBP13.26□□□□□ -0.29
PSMC6-202ENST00000458604 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
PSMC6-202ENST00000458604 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
PSMC6-202ENST00000458604 USP17L2Q6R6M4 530 aa13.25□□□□□ -0.29
PSMC6-202ENST00000458604 LYPD8Q6UX82 237 aa13.25□□□□□ -0.29
PSMC6-202ENST00000458604 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
PSMC6-202ENST00000458604 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
PSMC6-202ENST00000458604 RBM47A0AV96 593 aaKnown RBP13.24□□□□□ -0.29
PSMC6-202ENST00000458604 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
PSMC6-202ENST00000458604 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
PSMC6-202ENST00000458604 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
PSMC6-202ENST00000458604 PSEN2P49810 448 aa13.23□□□□□ -0.29
PSMC6-202ENST00000458604 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
PSMC6-202ENST00000458604 FAM174AQ8TBP5 190 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms