RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 MYT1Q01538 1121 aa18.66■□□□□ 0.58
DDX39B-213ENST00000456976 VPS72Q15906 364 aa18.66■□□□□ 0.58
DDX39B-213ENST00000456976 LAMC1P11047 1609 aa18.65■□□□□ 0.58
DDX39B-213ENST00000456976 COL22A1Q8NFW1 1626 aaPredicted RBP18.65■□□□□ 0.58
DDX39B-213ENST00000456976 PTPN23Q9H3S7 1636 aa18.65■□□□□ 0.58
DDX39B-213ENST00000456976 DAPK1P53355 1430 aa18.65■□□□□ 0.58
DDX39B-213ENST00000456976 GLI3P10071 1580 aa18.64■□□□□ 0.58
DDX39B-213ENST00000456976 SPHKAPQ2M3C7 1700 aa18.64■□□□□ 0.57
DDX39B-213ENST00000456976 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
DDX39B-213ENST00000456976 PPP1R1BQ9UD71 204 aaPredicted RBP18.64■□□□□ 0.57
DDX39B-213ENST00000456976 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
DDX39B-213ENST00000456976 SLIT2O94813 1529 aa18.63■□□□□ 0.57
DDX39B-213ENST00000456976 FOXO3O43524 673 aa18.61■□□□□ 0.57
DDX39B-213ENST00000456976 LRPPRCP42704 1394 aaKnown RBP18.6■□□□□ 0.57
DDX39B-213ENST00000456976 HAP1P54257 671 aaPredicted RBP18.6■□□□□ 0.57
DDX39B-213ENST00000456976 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
DDX39B-213ENST00000456976 ZNF326Q5BKZ1 582 aaKnown RBP18.6■□□□□ 0.57
DDX39B-213ENST00000456976 ZNF784Q8NCA9 323 aaPredicted RBP18.59■□□□□ 0.57
DDX39B-213ENST00000456976 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.57
DDX39B-213ENST00000456976 C1QTNF8P60827 252 aa18.58■□□□□ 0.56
DDX39B-213ENST00000456976 EZH2Q15910 746 aaKnown RBP18.58■□□□□ 0.56
DDX39B-213ENST00000456976 BRWD3Q6RI45 1802 aa18.58■□□□□ 0.56
DDX39B-213ENST00000456976 SPON1Q9HCB6 807 aa18.55■□□□□ 0.56
DDX39B-213ENST00000456976 NBPF8Q3BBV2 869 aa18.54■□□□□ 0.56
DDX39B-213ENST00000456976 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
DDX39B-213ENST00000456976 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
DDX39B-213ENST00000456976 MARF1Q9Y4F3 1742 aaKnown RBP18.54■□□□□ 0.56
DDX39B-213ENST00000456976 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
DDX39B-213ENST00000456976 FAM98CQ17RN3 349 aaKnown RBP18.53■□□□□ 0.56
DDX39B-213ENST00000456976 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
DDX39B-213ENST00000456976 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
DDX39B-213ENST00000456976 PXDNQ92626 1479 aa18.52■□□□□ 0.56
DDX39B-213ENST00000456976 CAMKK2Q96RR4 588 aa18.52■□□□□ 0.56
DDX39B-213ENST00000456976 DISP2A7MBM2 1401 aa18.51■□□□□ 0.55
DDX39B-213ENST00000456976 SPATA31A3Q5VYP0 1347 aa18.5■□□□□ 0.55
DDX39B-213ENST00000456976 KCNQ2O43526 872 aa18.5■□□□□ 0.55
DDX39B-213ENST00000456976 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
DDX39B-213ENST00000456976 ADGRL2O95490 1459 aa18.5■□□□□ 0.55
DDX39B-213ENST00000456976 NRXN3Q9Y4C0 1643 aa18.49■□□□□ 0.55
DDX39B-213ENST00000456976 ROBO2Q9HCK4 1378 aa18.49■□□□□ 0.55
DDX39B-213ENST00000456976 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
DDX39B-213ENST00000456976 APBA3O96018 575 aa18.47■□□□□ 0.55
DDX39B-213ENST00000456976 KRT28Q7Z3Y7 464 aa18.46■□□□□ 0.55
DDX39B-213ENST00000456976 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
DDX39B-213ENST00000456976 TRIM37O94972 964 aa18.45■□□□□ 0.54
DDX39B-213ENST00000456976 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
DDX39B-213ENST00000456976 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
DDX39B-213ENST00000456976 PSME1Q06323 249 aa18.44■□□□□ 0.54
DDX39B-213ENST00000456976 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
DDX39B-213ENST00000456976 CABLES1Q8TDN4 633 aa18.44■□□□□ 0.54
DDX39B-213ENST00000456976 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
DDX39B-213ENST00000456976 RGPD1P0DJD0 1748 aa18.43■□□□□ 0.54
DDX39B-213ENST00000456976 APLP2Q06481 763 aa18.42■□□□□ 0.54
DDX39B-213ENST00000456976 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
DDX39B-213ENST00000456976 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
DDX39B-213ENST00000456976 BTG4Q9NY30 223 aa18.4■□□□□ 0.54
DDX39B-213ENST00000456976 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
DDX39B-213ENST00000456976 E9PCH4 1651 aa18.4■□□□□ 0.54
DDX39B-213ENST00000456976 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
DDX39B-213ENST00000456976 IQGAP3Q86VI3 1631 aa18.38■□□□□ 0.53
DDX39B-213ENST00000456976 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
DDX39B-213ENST00000456976 NUP155O75694 1391 aa18.36■□□□□ 0.53
DDX39B-213ENST00000456976 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
DDX39B-213ENST00000456976 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
DDX39B-213ENST00000456976 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
DDX39B-213ENST00000456976 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
DDX39B-213ENST00000456976 SPATA31A5Q5VU36 1347 aa18.34■□□□□ 0.53
DDX39B-213ENST00000456976 SPATA31A7Q8IWB4 1347 aa18.34■□□□□ 0.53
DDX39B-213ENST00000456976 CEP350Q5VT06 3117 aa18.34■□□□□ 0.53
DDX39B-213ENST00000456976 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
DDX39B-213ENST00000456976 ARHGEF10O15013 1369 aa18.32■□□□□ 0.52
DDX39B-213ENST00000456976 UTRNP46939 3433 aa18.32■□□□□ 0.52
DDX39B-213ENST00000456976 CDC42BPGQ6DT37 1551 aa18.32■□□□□ 0.52
DDX39B-213ENST00000456976 NAIPQ13075 1403 aa18.32■□□□□ 0.52
DDX39B-213ENST00000456976 PLCH1Q4KWH8 1693 aa18.3■□□□□ 0.52
DDX39B-213ENST00000456976 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
DDX39B-213ENST00000456976 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
DDX39B-213ENST00000456976 SBNO1A3KN83 1393 aa18.29■□□□□ 0.52
DDX39B-213ENST00000456976 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
DDX39B-213ENST00000456976 WAPLQ7Z5K2 1190 aa18.28■□□□□ 0.52
DDX39B-213ENST00000456976 TNS1Q9HBL0 1735 aaKnown RBP18.28■□□□□ 0.52
DDX39B-213ENST00000456976 CAMTA1Q9Y6Y1 1673 aa18.27■□□□□ 0.52
DDX39B-213ENST00000456976 STK26Q9P289 416 aa18.26■□□□□ 0.51
DDX39B-213ENST00000456976 SYT17Q9BSW7 474 aa18.25■□□□□ 0.51
DDX39B-213ENST00000456976 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
DDX39B-213ENST00000456976 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
DDX39B-213ENST00000456976 ZBTB7AO95365 584 aa18.22■□□□□ 0.51
DDX39B-213ENST00000456976 FHDC1Q9C0D6 1143 aaPredicted RBP18.22■□□□□ 0.51
DDX39B-213ENST00000456976 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
DDX39B-213ENST00000456976 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
DDX39B-213ENST00000456976 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
DDX39B-213ENST00000456976 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
DDX39B-213ENST00000456976 RRBP1Q9P2E9 1410 aaKnown RBP18.2■□□□□ 0.5
DDX39B-213ENST00000456976 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
DDX39B-213ENST00000456976 PTGER2P43116 358 aa18.19■□□□□ 0.5
DDX39B-213ENST00000456976 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
DDX39B-213ENST00000456976 RREB1Q92766 1687 aa18.18■□□□□ 0.5
DDX39B-213ENST00000456976 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
DDX39B-213ENST00000456976 NUP188Q5SRE5 1749 aa18.18■□□□□ 0.5
DDX39B-213ENST00000456976 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms