RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
TIMP1-205ENST00000456754 MSH6P52701 1360 aa20■□□□□ 0.79
TIMP1-205ENST00000456754 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
TIMP1-205ENST00000456754 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
TIMP1-205ENST00000456754 C19orf44Q9H6X5 657 aa19.98■□□□□ 0.79
TIMP1-205ENST00000456754 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
TIMP1-205ENST00000456754 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
TIMP1-205ENST00000456754 CDC42BPGQ6DT37 1551 aa19.95■□□□□ 0.78
TIMP1-205ENST00000456754 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
TIMP1-205ENST00000456754 USP47Q96K76 1375 aa19.95■□□□□ 0.78
TIMP1-205ENST00000456754 FMN2Q9NZ56 1722 aa19.94■□□□□ 0.78
TIMP1-205ENST00000456754 RGPD8O14715 1765 aaPredicted RBP19.94■□□□□ 0.78
TIMP1-205ENST00000456754 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
TIMP1-205ENST00000456754 MST1RQ04912 1400 aa19.93■□□□□ 0.78
TIMP1-205ENST00000456754 ATF3P18847 181 aa19.93■□□□□ 0.78
TIMP1-205ENST00000456754 DCCP43146 1447 aa19.92■□□□□ 0.78
TIMP1-205ENST00000456754 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
TIMP1-205ENST00000456754 USP32Q8NFA0 1604 aa19.91■□□□□ 0.78
TIMP1-205ENST00000456754 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
TIMP1-205ENST00000456754 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
TIMP1-205ENST00000456754 CADPS2Q86UW7 1296 aa19.9■□□□□ 0.78
TIMP1-205ENST00000456754 SLAIN2Q9P270 581 aa19.9■□□□□ 0.78
TIMP1-205ENST00000456754 EIF3AQ14152 1382 aaKnown RBP19.9■□□□□ 0.78
TIMP1-205ENST00000456754 TOM1O60784 492 aa19.89■□□□□ 0.77
TIMP1-205ENST00000456754 ROBO1Q9Y6N7 1651 aa19.89■□□□□ 0.77
TIMP1-205ENST00000456754 C1orf167Q5SNV9 1468 aa19.88■□□□□ 0.77
TIMP1-205ENST00000456754 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
TIMP1-205ENST00000456754 WASLO00401 505 aaPredicted RBP19.88■□□□□ 0.77
TIMP1-205ENST00000456754 TESK2Q96S53 571 aa19.87■□□□□ 0.77
TIMP1-205ENST00000456754 ORAI2Q96SN7 254 aa19.87■□□□□ 0.77
TIMP1-205ENST00000456754 CDK19Q9BWU1 502 aa19.87■□□□□ 0.77
TIMP1-205ENST00000456754 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
TIMP1-205ENST00000456754 FBXO41Q8TF61 875 aa19.85■□□□□ 0.77
TIMP1-205ENST00000456754 DDX17Q92841 729 aaKnown RBP19.85■□□□□ 0.77
TIMP1-205ENST00000456754 CABP2Q9NPB3 220 aa19.85■□□□□ 0.77
TIMP1-205ENST00000456754 BRINP3Q76B58 766 aa19.84■□□□□ 0.77
TIMP1-205ENST00000456754 ATP7BP35670 1465 aa19.83■□□□□ 0.76
TIMP1-205ENST00000456754 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.76
TIMP1-205ENST00000456754 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
TIMP1-205ENST00000456754 SRPK2P78362 688 aaKnown RBP19.81■□□□□ 0.76
TIMP1-205ENST00000456754 ESCO1Q5FWF5 840 aa19.81■□□□□ 0.76
TIMP1-205ENST00000456754 SBNO2Q9Y2G9 1366 aa19.81■□□□□ 0.76
TIMP1-205ENST00000456754 TOPAZ1Q8N9V7 1692 aa19.81■□□□□ 0.76
TIMP1-205ENST00000456754 NUDT16Q96DE0 195 aaKnown RBP19.8■□□□□ 0.76
TIMP1-205ENST00000456754 ILDR1Q86SU0 546 aaPredicted RBP19.79■□□□□ 0.76
TIMP1-205ENST00000456754 EVC2Q86UK5 1308 aa19.78■□□□□ 0.76
TIMP1-205ENST00000456754 ANKARQ7Z5J8 1434 aa19.78■□□□□ 0.76
TIMP1-205ENST00000456754 PMFBP1Q8TBY8 1022 aa19.78■□□□□ 0.76
TIMP1-205ENST00000456754 HSPA1LP34931 641 aa19.77■□□□□ 0.76
TIMP1-205ENST00000456754 XPCQ01831 940 aaPredicted RBP19.77■□□□□ 0.76
TIMP1-205ENST00000456754 NHSL1Q5SYE7 1610 aa19.76■□□□□ 0.75
TIMP1-205ENST00000456754 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
TIMP1-205ENST00000456754 C11orf95C9JLR9 678 aaPredicted RBP19.75■□□□□ 0.75
TIMP1-205ENST00000456754 PHLPP1O60346 1717 aa19.75■□□□□ 0.75
TIMP1-205ENST00000456754 FOXO3O43524 673 aa19.74■□□□□ 0.75
TIMP1-205ENST00000456754 PHF8Q9UPP1 1060 aa19.74■□□□□ 0.75
TIMP1-205ENST00000456754 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
TIMP1-205ENST00000456754 KIF1AQ12756 1690 aa19.73■□□□□ 0.75
TIMP1-205ENST00000456754 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
TIMP1-205ENST00000456754 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
TIMP1-205ENST00000456754 COL16A1Q07092 1604 aaPredicted RBP19.73■□□□□ 0.75
TIMP1-205ENST00000456754 CABP1Q9NZU7 370 aa19.71■□□□□ 0.75
TIMP1-205ENST00000456754 TMF1P82094 1093 aa19.7■□□□□ 0.74
TIMP1-205ENST00000456754 CCDC61Q9Y6R9 512 aa19.7■□□□□ 0.74
TIMP1-205ENST00000456754 PXDNQ92626 1479 aa19.69■□□□□ 0.74
TIMP1-205ENST00000456754 MYOM1P52179 1685 aa19.68■□□□□ 0.74
TIMP1-205ENST00000456754 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
TIMP1-205ENST00000456754 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
TIMP1-205ENST00000456754 ACEP12821 1306 aa19.68■□□□□ 0.74
TIMP1-205ENST00000456754 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
TIMP1-205ENST00000456754 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
TIMP1-205ENST00000456754 PLEKHG3A1L390 1219 aa19.66■□□□□ 0.74
TIMP1-205ENST00000456754 NGDNQ8NEJ9 315 aaKnown RBP19.66■□□□□ 0.74
TIMP1-205ENST00000456754 CD163L1Q9NR16 1453 aa19.66■□□□□ 0.74
TIMP1-205ENST00000456754 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
TIMP1-205ENST00000456754 AKAP12Q02952 1782 aa19.65■□□□□ 0.74
TIMP1-205ENST00000456754 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
TIMP1-205ENST00000456754 SOS2Q07890 1332 aaPredicted RBP19.65■□□□□ 0.74
TIMP1-205ENST00000456754 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
TIMP1-205ENST00000456754 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.73
TIMP1-205ENST00000456754 PSME1Q06323 249 aa19.63■□□□□ 0.73
TIMP1-205ENST00000456754 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
TIMP1-205ENST00000456754 PUS7Q96PZ0 661 aaKnown RBP19.61■□□□□ 0.73
TIMP1-205ENST00000456754 MON2Q7Z3U7 1717 aa19.6■□□□□ 0.73
TIMP1-205ENST00000456754 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
TIMP1-205ENST00000456754 CPSF1Q10570 1443 aaKnown RBP19.59■□□□□ 0.73
TIMP1-205ENST00000456754 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
TIMP1-205ENST00000456754 WASHC2AQ641Q2 1341 aa19.59■□□□□ 0.73
TIMP1-205ENST00000456754 USP6P35125 1406 aa19.59■□□□□ 0.73
TIMP1-205ENST00000456754 ALS2Q96Q42 1657 aa19.59■□□□□ 0.73
TIMP1-205ENST00000456754 NRKQ7Z2Y5 1582 aa19.58■□□□□ 0.73
TIMP1-205ENST00000456754 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
TIMP1-205ENST00000456754 SPATA31A3Q5VYP0 1347 aa19.57■□□□□ 0.72
TIMP1-205ENST00000456754 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
TIMP1-205ENST00000456754 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
TIMP1-205ENST00000456754 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
TIMP1-205ENST00000456754 PNPLA6Q8IY17 1366 aa19.57■□□□□ 0.72
TIMP1-205ENST00000456754 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
TIMP1-205ENST00000456754 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
TIMP1-205ENST00000456754 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms