RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
PMPCB-206ENST00000456433 CDC42BPGQ6DT37 1551 aa24.32■■□□□ 1.48
PMPCB-206ENST00000456433 C14orf37Q86TY3 774 aa24.31■■□□□ 1.48
PMPCB-206ENST00000456433 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
PMPCB-206ENST00000456433 POGKQ9P215 609 aa24.29■■□□□ 1.48
PMPCB-206ENST00000456433 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
PMPCB-206ENST00000456433 CADPS2Q86UW7 1296 aa24.28■■□□□ 1.48
PMPCB-206ENST00000456433 TOM1O60784 492 aa24.27■■□□□ 1.48
PMPCB-206ENST00000456433 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
PMPCB-206ENST00000456433 ATF3P18847 181 aa24.25■■□□□ 1.47
PMPCB-206ENST00000456433 CENPJQ9HC77 1338 aaPredicted RBP24.25■■□□□ 1.47
PMPCB-206ENST00000456433 QRICH2Q9H0J4 1663 aa24.24■■□□□ 1.47
PMPCB-206ENST00000456433 MST1RQ04912 1400 aa24.23■■□□□ 1.47
PMPCB-206ENST00000456433 FMN2Q9NZ56 1722 aa24.23■■□□□ 1.47
PMPCB-206ENST00000456433 SBNO2Q9Y2G9 1366 aa24.22■■□□□ 1.47
PMPCB-206ENST00000456433 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
PMPCB-206ENST00000456433 USP47Q96K76 1375 aa24.18■■□□□ 1.46
PMPCB-206ENST00000456433 MINK1Q8N4C8 1332 aaPredicted RBP24.18■■□□□ 1.46
PMPCB-206ENST00000456433 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
PMPCB-206ENST00000456433 C1orf167Q5SNV9 1468 aa24.16■■□□□ 1.46
PMPCB-206ENST00000456433 WASLO00401 505 aaPredicted RBP24.15■■□□□ 1.46
PMPCB-206ENST00000456433 ANKARQ7Z5J8 1434 aa24.15■■□□□ 1.46
PMPCB-206ENST00000456433 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.45
PMPCB-206ENST00000456433 ROBO1Q9Y6N7 1651 aa24.14■■□□□ 1.45
PMPCB-206ENST00000456433 TULP4Q9NRJ4 1543 aa24.14■■□□□ 1.45
PMPCB-206ENST00000456433 USP32Q8NFA0 1604 aa24.12■■□□□ 1.45
PMPCB-206ENST00000456433 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
PMPCB-206ENST00000456433 RGPD8O14715 1765 aaPredicted RBP24.09■■□□□ 1.45
PMPCB-206ENST00000456433 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
PMPCB-206ENST00000456433 PIP4K2BP78356 416 aa24.09■■□□□ 1.45
PMPCB-206ENST00000456433 TESK2Q96S53 571 aa24.09■■□□□ 1.45
PMPCB-206ENST00000456433 ATP7BP35670 1465 aa24.08■■□□□ 1.45
PMPCB-206ENST00000456433 BRINP3Q76B58 766 aa24.08■■□□□ 1.45
PMPCB-206ENST00000456433 CDK19Q9BWU1 502 aa24.08■■□□□ 1.45
PMPCB-206ENST00000456433 EVC2Q86UK5 1308 aa24.08■■□□□ 1.44
PMPCB-206ENST00000456433 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
PMPCB-206ENST00000456433 KIF1AQ12756 1690 aa24.07■■□□□ 1.44
PMPCB-206ENST00000456433 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
PMPCB-206ENST00000456433 EIF4G2P78344 907 aaKnown RBP eCLIP24.06■■□□□ 1.44
PMPCB-206ENST00000456433 PRR36Q9H6K5 1346 aa24.06■■□□□ 1.44
PMPCB-206ENST00000456433 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
PMPCB-206ENST00000456433 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
PMPCB-206ENST00000456433 TOPAZ1Q8N9V7 1692 aa24.05■■□□□ 1.44
PMPCB-206ENST00000456433 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
PMPCB-206ENST00000456433 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
PMPCB-206ENST00000456433 NUTM2FA1L443 756 aa24.02■■□□□ 1.44
PMPCB-206ENST00000456433 PUS7Q96PZ0 661 aaKnown RBP24.02■■□□□ 1.44
PMPCB-206ENST00000456433 ESCO1Q5FWF5 840 aa24.01■■□□□ 1.43
PMPCB-206ENST00000456433 NUDT16Q96DE0 195 aaKnown RBP24.01■■□□□ 1.43
PMPCB-206ENST00000456433 HSPA5P11021 654 aaKnown RBP24■■□□□ 1.43
PMPCB-206ENST00000456433 SRPK2P78362 688 aaKnown RBP24■■□□□ 1.43
PMPCB-206ENST00000456433 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
PMPCB-206ENST00000456433 ATAD2Q6PL18 1390 aa23.99■■□□□ 1.43
PMPCB-206ENST00000456433 CABP2Q9NPB3 220 aa23.98■■□□□ 1.43
PMPCB-206ENST00000456433 PHF8Q9UPP1 1060 aa23.98■■□□□ 1.43
PMPCB-206ENST00000456433 PHLPP1O60346 1717 aa23.97■■□□□ 1.43
PMPCB-206ENST00000456433 TMF1P82094 1093 aa23.97■■□□□ 1.43
PMPCB-206ENST00000456433 COL16A1Q07092 1604 aaPredicted RBP23.96■■□□□ 1.43
PMPCB-206ENST00000456433 DISP3Q9P2K9 1392 aa23.96■■□□□ 1.43
PMPCB-206ENST00000456433 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
PMPCB-206ENST00000456433 PLEKHG3A1L390 1219 aa23.95■■□□□ 1.42
PMPCB-206ENST00000456433 HSPA1LP34931 641 aa23.94■■□□□ 1.42
PMPCB-206ENST00000456433 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
PMPCB-206ENST00000456433 POLR3AO14802 1390 aaPredicted RBP23.93■■□□□ 1.42
PMPCB-206ENST00000456433 SOS2Q07890 1332 aaPredicted RBP23.93■■□□□ 1.42
PMPCB-206ENST00000456433 PXDNQ92626 1479 aa23.93■■□□□ 1.42
PMPCB-206ENST00000456433 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
PMPCB-206ENST00000456433 FOXO3O43524 673 aa23.91■■□□□ 1.42
PMPCB-206ENST00000456433 NINLQ9Y2I6 1382 aa23.9■■□□□ 1.42
PMPCB-206ENST00000456433 PMFBP1Q8TBY8 1022 aa23.89■■□□□ 1.41
PMPCB-206ENST00000456433 DDX17Q92841 729 aaKnown RBP23.88■■□□□ 1.41
PMPCB-206ENST00000456433 CABP1Q9NZU7 370 aa23.87■■□□□ 1.41
PMPCB-206ENST00000456433 TRPM3Q9HCF6 1732 aaPredicted RBP23.87■■□□□ 1.41
PMPCB-206ENST00000456433 ACEP12821 1306 aa23.86■■□□□ 1.41
PMPCB-206ENST00000456433 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
PMPCB-206ENST00000456433 NGDNQ8NEJ9 315 aaKnown RBP23.86■■□□□ 1.41
PMPCB-206ENST00000456433 SBNO1A3KN83 1393 aa23.85■■□□□ 1.41
PMPCB-206ENST00000456433 SHPRHQ149N8 1683 aa23.84■■□□□ 1.41
PMPCB-206ENST00000456433 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
PMPCB-206ENST00000456433 LRRC59Q96AG4 307 aaKnown RBP23.84■■□□□ 1.41
PMPCB-206ENST00000456433 CPSF1Q10570 1443 aaKnown RBP23.84■■□□□ 1.41
PMPCB-206ENST00000456433 CD163L1Q9NR16 1453 aa23.83■■□□□ 1.41
PMPCB-206ENST00000456433 PSME1Q06323 249 aa23.83■■□□□ 1.41
PMPCB-206ENST00000456433 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.41
PMPCB-206ENST00000456433 MYOM1P52179 1685 aa23.83■■□□□ 1.4
PMPCB-206ENST00000456433 JCADQ9P266 1359 aa23.82■■□□□ 1.4
PMPCB-206ENST00000456433 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
PMPCB-206ENST00000456433 USP6P35125 1406 aa23.8■■□□□ 1.4
PMPCB-206ENST00000456433 XPCQ01831 940 aaPredicted RBP23.8■■□□□ 1.4
PMPCB-206ENST00000456433 TNS3Q68CZ2 1445 aa23.8■■□□□ 1.4
PMPCB-206ENST00000456433 ZNF692Q9BU19 519 aaPredicted RBP23.8■■□□□ 1.4
PMPCB-206ENST00000456433 SPATA31A3Q5VYP0 1347 aa23.8■■□□□ 1.4
PMPCB-206ENST00000456433 ALS2Q96Q42 1657 aa23.79■■□□□ 1.4
PMPCB-206ENST00000456433 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
PMPCB-206ENST00000456433 COL22A1Q8NFW1 1626 aaPredicted RBP23.79■■□□□ 1.4
PMPCB-206ENST00000456433 NRKQ7Z2Y5 1582 aa23.78■■□□□ 1.4
PMPCB-206ENST00000456433 SSH2Q76I76 1423 aa23.78■■□□□ 1.4
PMPCB-206ENST00000456433 C11orf95C9JLR9 678 aaPredicted RBP23.78■■□□□ 1.4
PMPCB-206ENST00000456433 TMC1Q8TDI8 760 aa23.78■■□□□ 1.4
PMPCB-206ENST00000456433 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms