RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
SEMA3B-208ENST00000456210 DEPDC5O75140 1603 aa24.26■■□□□ 1.47
SEMA3B-208ENST00000456210 AAMPQ13685 434 aa24.24■■□□□ 1.47
SEMA3B-208ENST00000456210 HECW2Q9P2P5 1572 aa24.24■■□□□ 1.47
SEMA3B-208ENST00000456210 TRPM2O94759 1503 aa24.24■■□□□ 1.47
SEMA3B-208ENST00000456210 STAC3Q96MF2 364 aa24.23■■□□□ 1.47
SEMA3B-208ENST00000456210 CENPJQ9HC77 1338 aaPredicted RBP24.21■■□□□ 1.47
SEMA3B-208ENST00000456210 ABCA6Q8N139 1617 aa24.2■■□□□ 1.46
SEMA3B-208ENST00000456210 MLH3Q9UHC1 1453 aa24.2■■□□□ 1.46
SEMA3B-208ENST00000456210 TBC1D32Q96NH3 1257 aa24.19■■□□□ 1.46
SEMA3B-208ENST00000456210 RRAGDQ9NQL2 400 aaPredicted RBP24.19■■□□□ 1.46
SEMA3B-208ENST00000456210 KANK1Q14678 1352 aa24.19■■□□□ 1.46
SEMA3B-208ENST00000456210 SLKQ9H2G2 1235 aaPredicted RBP24.18■■□□□ 1.46
SEMA3B-208ENST00000456210 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
SEMA3B-208ENST00000456210 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
SEMA3B-208ENST00000456210 TET3O43151 1660 aa24.16■■□□□ 1.46
SEMA3B-208ENST00000456210 SHPRHQ149N8 1683 aa24.16■■□□□ 1.46
SEMA3B-208ENST00000456210 UPF2Q9HAU5 1272 aaKnown RBP24.16■■□□□ 1.46
SEMA3B-208ENST00000456210 COG6Q9Y2V7 657 aa24.15■■□□□ 1.46
SEMA3B-208ENST00000456210 CLTCL1P53675 1640 aa24.15■■□□□ 1.46
SEMA3B-208ENST00000456210 VWDEQ8N2E2 1590 aa24.15■■□□□ 1.46
SEMA3B-208ENST00000456210 NEURL4Q96JN8 1562 aa24.15■■□□□ 1.46
SEMA3B-208ENST00000456210 DIP2CQ9Y2E4 1556 aa24.15■■□□□ 1.46
SEMA3B-208ENST00000456210 POLR3AO14802 1390 aaPredicted RBP24.15■■□□□ 1.46
SEMA3B-208ENST00000456210 PANK1Q8TE04 598 aa24.14■■□□□ 1.46
SEMA3B-208ENST00000456210 FSD2A1L4K1 749 aa24.14■■□□□ 1.45
SEMA3B-208ENST00000456210 KIF3BO15066 747 aa24.14■■□□□ 1.45
SEMA3B-208ENST00000456210 SIGLEC1Q9BZZ2 1709 aa24.13■■□□□ 1.45
SEMA3B-208ENST00000456210 PTPRTO14522 1441 aa24.13■■□□□ 1.45
SEMA3B-208ENST00000456210 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
SEMA3B-208ENST00000456210 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
SEMA3B-208ENST00000456210 WWC1Q8IX03 1113 aa24.12■■□□□ 1.45
SEMA3B-208ENST00000456210 ERVK-7P63135 1459 aa24.11■■□□□ 1.45
SEMA3B-208ENST00000456210 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
SEMA3B-208ENST00000456210 IQSEC2Q5JU85 1478 aa24.11■■□□□ 1.45
SEMA3B-208ENST00000456210 MROH1Q8NDA8 1641 aa24.09■■□□□ 1.45
SEMA3B-208ENST00000456210 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
SEMA3B-208ENST00000456210 ARHGEF40Q8TER5 1519 aa24.08■■□□□ 1.45
SEMA3B-208ENST00000456210 GOLGA6L3A6NEY3 463 aa24.07■■□□□ 1.44
SEMA3B-208ENST00000456210 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-208ENST00000456210 XRCC6P12956 609 aaKnown RBP eCLIP24.06■■□□□ 1.44
SEMA3B-208ENST00000456210 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
SEMA3B-208ENST00000456210 MCM4P33991 863 aa24.06■■□□□ 1.44
SEMA3B-208ENST00000456210 PDZRN3Q9UPQ7 1066 aa24.06■■□□□ 1.44
SEMA3B-208ENST00000456210 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
SEMA3B-208ENST00000456210 MLECQ14165 292 aa24.03■■□□□ 1.44
SEMA3B-208ENST00000456210 MYOM2P54296 1465 aa24.03■■□□□ 1.44
SEMA3B-208ENST00000456210 CLCN1P35523 988 aa24.03■■□□□ 1.44
SEMA3B-208ENST00000456210 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
SEMA3B-208ENST00000456210 RWDD1Q9H446 243 aaPredicted RBP24.01■■□□□ 1.43
SEMA3B-208ENST00000456210 GGT6Q6P531 493 aa24.01■■□□□ 1.43
SEMA3B-208ENST00000456210 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
SEMA3B-208ENST00000456210 RLBP1P12271 317 aa24■■□□□ 1.43
SEMA3B-208ENST00000456210 SBNO2Q9Y2G9 1366 aa24■■□□□ 1.43
SEMA3B-208ENST00000456210 IFT172Q9UG01 1749 aa24■■□□□ 1.43
SEMA3B-208ENST00000456210 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
SEMA3B-208ENST00000456210 WDR63Q8IWG1 891 aa23.99■■□□□ 1.43
SEMA3B-208ENST00000456210 CHMP5Q9NZZ3 219 aa23.99■■□□□ 1.43
SEMA3B-208ENST00000456210 RUNDC1Q96C34 613 aa23.99■■□□□ 1.43
SEMA3B-208ENST00000456210 USP32Q8NFA0 1604 aa23.99■■□□□ 1.43
SEMA3B-208ENST00000456210 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
SEMA3B-208ENST00000456210 NCBP3Q53F19 620 aaKnown RBP23.96■■□□□ 1.43
SEMA3B-208ENST00000456210 MRE11P49959 708 aa23.95■■□□□ 1.42
SEMA3B-208ENST00000456210 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
SEMA3B-208ENST00000456210 ISY1Q9ULR0 285 aaKnown RBP23.95■■□□□ 1.42
SEMA3B-208ENST00000456210 NCOA3Q9Y6Q9 1424 aa23.94■■□□□ 1.42
SEMA3B-208ENST00000456210 PANK2Q9BZ23 570 aa23.94■■□□□ 1.42
SEMA3B-208ENST00000456210 ZC3H13Q5T200 1668 aaKnown RBP23.94■■□□□ 1.42
SEMA3B-208ENST00000456210 TRAK2O60296 914 aa23.93■■□□□ 1.42
SEMA3B-208ENST00000456210 TNNQ9UQP3 1299 aa23.93■■□□□ 1.42
SEMA3B-208ENST00000456210 C22orf23Q9BZE7 217 aa23.93■■□□□ 1.42
SEMA3B-208ENST00000456210 MVPQ14764 893 aaKnown RBP23.92■■□□□ 1.42
SEMA3B-208ENST00000456210 ADGRB2O60241 1585 aa23.92■■□□□ 1.42
SEMA3B-208ENST00000456210 KIF1BO60333 1816 aa23.92■■□□□ 1.42
SEMA3B-208ENST00000456210 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
SEMA3B-208ENST00000456210 DDX11L8A8MPP1 907 aa23.91■■□□□ 1.42
SEMA3B-208ENST00000456210 NRXN1Q9ULB1 1477 aa23.9■■□□□ 1.42
SEMA3B-208ENST00000456210 REREQ9P2R6 1566 aa23.9■■□□□ 1.42
SEMA3B-208ENST00000456210 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
SEMA3B-208ENST00000456210 SETBP1Q9Y6X0 1596 aa23.89■■□□□ 1.42
SEMA3B-208ENST00000456210 NSD3Q9BZ95 1437 aa23.89■■□□□ 1.41
SEMA3B-208ENST00000456210 GLIPR1L2Q4G1C9 344 aa23.88■■□□□ 1.41
SEMA3B-208ENST00000456210 GZF1Q9H116 711 aaPredicted RBP23.88■■□□□ 1.41
SEMA3B-208ENST00000456210 NAP1L5Q96NT1 182 aaPredicted RBP23.87■■□□□ 1.41
SEMA3B-208ENST00000456210 DDIT3P35638 169 aa23.87■■□□□ 1.41
SEMA3B-208ENST00000456210 MYH16Q9H6N6 1097 aa23.87■■□□□ 1.41
SEMA3B-208ENST00000456210 RRP7AQ9Y3A4 280 aaKnown RBP23.87■■□□□ 1.41
SEMA3B-208ENST00000456210 HDAC1Q13547 482 aaPredicted RBP23.86■■□□□ 1.41
SEMA3B-208ENST00000456210 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
SEMA3B-208ENST00000456210 CT47B1P0C2W7 299 aaPredicted RBP23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 SPRYD3Q8NCJ5 442 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 ARXQ96QS3 562 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 GRPEL1Q9HAV7 217 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 AGLP35573 1532 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 UGGT1Q9NYU2 1555 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 NEUROD2Q15784 382 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 ZKSCAN2Q63HK3 967 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 MORC1Q86VD1 984 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
SEMA3B-208ENST00000456210 MROH2AA6NES4 1674 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms