RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
COMMD1-205ENST00000455659 KIF1AQ12756 1690 aa10.19□□□□□ -0.78
COMMD1-205ENST00000455659 RALGAPBQ86X10 1494 aa10.19□□□□□ -0.78
COMMD1-205ENST00000455659 ATF3P18847 181 aa10.19□□□□□ -0.78
COMMD1-205ENST00000455659 CADPS2Q86UW7 1296 aa10.19□□□□□ -0.78
COMMD1-205ENST00000455659 ITSN1Q15811 1721 aa10.19□□□□□ -0.78
COMMD1-205ENST00000455659 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
COMMD1-205ENST00000455659 C19orf44Q9H6X5 657 aa10.18□□□□□ -0.78
COMMD1-205ENST00000455659 RGPD8O14715 1765 aaPredicted RBP10.18□□□□□ -0.78
COMMD1-205ENST00000455659 C1orf167Q5SNV9 1468 aa10.17□□□□□ -0.78
COMMD1-205ENST00000455659 ROCK2O75116 1388 aaKnown RBP10.16□□□□□ -0.78
COMMD1-205ENST00000455659 CLSPNQ9HAW4 1339 aa10.16□□□□□ -0.78
COMMD1-205ENST00000455659 USP32Q8NFA0 1604 aa10.16□□□□□ -0.78
COMMD1-205ENST00000455659 SHPRHQ149N8 1683 aa10.15□□□□□ -0.78
COMMD1-205ENST00000455659 TOPAZ1Q8N9V7 1692 aa10.15□□□□□ -0.78
COMMD1-205ENST00000455659 MED1Q15648 1581 aaPredicted RBP10.15□□□□□ -0.78
COMMD1-205ENST00000455659 HSPA1LP34931 641 aa10.15□□□□□ -0.78
COMMD1-205ENST00000455659 WAPLQ7Z5K2 1190 aa10.15□□□□□ -0.78
COMMD1-205ENST00000455659 PRAM1Q96QH2 718 aa10.15□□□□□ -0.78
COMMD1-205ENST00000455659 TULP4Q9NRJ4 1543 aa10.15□□□□□ -0.78
COMMD1-205ENST00000455659 SAFB2Q14151 953 aaKnown RBP eCLIP10.14□□□□□ -0.79
COMMD1-205ENST00000455659 SLAIN2Q9P270 581 aa10.14□□□□□ -0.79
COMMD1-205ENST00000455659 TRAK1Q9UPV9 953 aa10.14□□□□□ -0.79
COMMD1-205ENST00000455659 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
COMMD1-205ENST00000455659 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
COMMD1-205ENST00000455659 POGKQ9P215 609 aa10.13□□□□□ -0.79
COMMD1-205ENST00000455659 GPRASP1Q5JY77 1395 aa10.13□□□□□ -0.79
COMMD1-205ENST00000455659 BRINP3Q76B58 766 aa10.12□□□□□ -0.79
COMMD1-205ENST00000455659 ANKARQ7Z5J8 1434 aa10.12□□□□□ -0.79
COMMD1-205ENST00000455659 ATP7BP35670 1465 aa10.11□□□□□ -0.79
COMMD1-205ENST00000455659 NBPF1Q3BBV0 1214 aa10.11□□□□□ -0.79
COMMD1-205ENST00000455659 SIRT1Q96EB6 747 aa10.11□□□□□ -0.79
COMMD1-205ENST00000455659 MINK1Q8N4C8 1332 aaPredicted RBP10.1□□□□□ -0.79
COMMD1-205ENST00000455659 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
COMMD1-205ENST00000455659 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
COMMD1-205ENST00000455659 PXDNQ92626 1479 aa10.09□□□□□ -0.79
COMMD1-205ENST00000455659 CENPJQ9HC77 1338 aaPredicted RBP10.08□□□□□ -0.8
COMMD1-205ENST00000455659 COL22A1Q8NFW1 1626 aaPredicted RBP10.08□□□□□ -0.8
COMMD1-205ENST00000455659 ABCA3Q99758 1704 aa10.08□□□□□ -0.8
COMMD1-205ENST00000455659 TRPM3Q9HCF6 1732 aaPredicted RBP10.08□□□□□ -0.8
COMMD1-205ENST00000455659 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
COMMD1-205ENST00000455659 JCADQ9P266 1359 aa10.08□□□□□ -0.8
COMMD1-205ENST00000455659 ESCO1Q5FWF5 840 aa10.06□□□□□ -0.8
COMMD1-205ENST00000455659 ORAI2Q96SN7 254 aa10.06□□□□□ -0.8
COMMD1-205ENST00000455659 CARD11Q9BXL7 1154 aa10.06□□□□□ -0.8
COMMD1-205ENST00000455659 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
COMMD1-205ENST00000455659 SBNO2Q9Y2G9 1366 aa10.05□□□□□ -0.8
COMMD1-205ENST00000455659 LRP6O75581 1613 aa10.05□□□□□ -0.8
COMMD1-205ENST00000455659 DDX17Q92841 729 aaKnown RBP10.05□□□□□ -0.8
COMMD1-205ENST00000455659 ALS2Q96Q42 1657 aa10.05□□□□□ -0.8
COMMD1-205ENST00000455659 PRR36Q9H6K5 1346 aa10.05□□□□□ -0.8
COMMD1-205ENST00000455659 MARF1Q9Y4F3 1742 aaKnown RBP10.04□□□□□ -0.8
COMMD1-205ENST00000455659 USP47Q96K76 1375 aa10.04□□□□□ -0.8
COMMD1-205ENST00000455659 AKAP12Q02952 1782 aa10.04□□□□□ -0.8
COMMD1-205ENST00000455659 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
COMMD1-205ENST00000455659 TNS3Q68CZ2 1445 aa10.04□□□□□ -0.8
COMMD1-205ENST00000455659 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
COMMD1-205ENST00000455659 NRKQ7Z2Y5 1582 aa10.03□□□□□ -0.8
COMMD1-205ENST00000455659 MON2Q7Z3U7 1717 aa10.03□□□□□ -0.8
COMMD1-205ENST00000455659 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
COMMD1-205ENST00000455659 SOS2Q07890 1332 aaPredicted RBP10.03□□□□□ -0.8
COMMD1-205ENST00000455659 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.8
COMMD1-205ENST00000455659 CRYBG1Q9Y4K1 1723 aa10.02□□□□□ -0.8
COMMD1-205ENST00000455659 PPIP5K1Q6PFW1 1433 aa10.02□□□□□ -0.81
COMMD1-205ENST00000455659 XPCQ01831 940 aaPredicted RBP10.02□□□□□ -0.81
COMMD1-205ENST00000455659 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
COMMD1-205ENST00000455659 PHRF1Q9P1Y6 1649 aaKnown RBP10.02□□□□□ -0.81
COMMD1-205ENST00000455659 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
COMMD1-205ENST00000455659 SPATA31A6Q5VVP1 1343 aa10.01□□□□□ -0.81
COMMD1-205ENST00000455659 EVC2Q86UK5 1308 aa10.01□□□□□ -0.81
COMMD1-205ENST00000455659 FOXO3O43524 673 aa10□□□□□ -0.81
COMMD1-205ENST00000455659 CDK19Q9BWU1 502 aa10□□□□□ -0.81
COMMD1-205ENST00000455659 ATAD2Q6PL18 1390 aa10□□□□□ -0.81
COMMD1-205ENST00000455659 MYOM1P52179 1685 aa9.99□□□□□ -0.81
COMMD1-205ENST00000455659 PMFBP1Q8TBY8 1022 aa9.99□□□□□ -0.81
COMMD1-205ENST00000455659 LRRC59Q96AG4 307 aaKnown RBP9.99□□□□□ -0.81
COMMD1-205ENST00000455659 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
COMMD1-205ENST00000455659 PHF23Q9BUL5 403 aaPredicted RBP9.99□□□□□ -0.81
COMMD1-205ENST00000455659 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
COMMD1-205ENST00000455659 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
COMMD1-205ENST00000455659 SBNO1A3KN83 1393 aa9.99□□□□□ -0.81
COMMD1-205ENST00000455659 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
COMMD1-205ENST00000455659 ARHGEF10O15013 1369 aa9.99□□□□□ -0.81
COMMD1-205ENST00000455659 CABP2Q9NPB3 220 aa9.98□□□□□ -0.81
COMMD1-205ENST00000455659 MEX3CQ5U5Q3 659 aaKnown RBP9.97□□□□□ -0.81
COMMD1-205ENST00000455659 NGDNQ8NEJ9 315 aaKnown RBP9.97□□□□□ -0.81
COMMD1-205ENST00000455659 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.96□□□□□ -0.81
COMMD1-205ENST00000455659 KRT28Q7Z3Y7 464 aa9.96□□□□□ -0.82
COMMD1-205ENST00000455659 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
COMMD1-205ENST00000455659 SPATA31A3Q5VYP0 1347 aa9.96□□□□□ -0.82
COMMD1-205ENST00000455659 USP6P35125 1406 aa9.96□□□□□ -0.82
COMMD1-205ENST00000455659 ST20-MTHFSA0A0A6YYL1 179 aa9.95□□□□□ -0.82
COMMD1-205ENST00000455659 NUTM2BA6NNL0 878 aaPredicted RBP9.95□□□□□ -0.82
COMMD1-205ENST00000455659 NUTM2EB1AL46 878 aaPredicted RBP9.95□□□□□ -0.82
COMMD1-205ENST00000455659 PSME1Q06323 249 aa9.95□□□□□ -0.82
COMMD1-205ENST00000455659 NUTM2AQ8IVF1 878 aaPredicted RBP9.95□□□□□ -0.82
COMMD1-205ENST00000455659 ACEP12821 1306 aa9.95□□□□□ -0.82
COMMD1-205ENST00000455659 USP54Q70EL1 1684 aa9.95□□□□□ -0.82
COMMD1-205ENST00000455659 NWD2Q9ULI1 1742 aa9.95□□□□□ -0.82
COMMD1-205ENST00000455659 KIF20BQ96Q89 1820 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms