RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 PTPRUQ92729 1446 aa17.91■□□□□ 0.46
LINC00343-203ENST00000454555 KCNA6P17658 529 aa17.9■□□□□ 0.46
LINC00343-203ENST00000454555 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
LINC00343-203ENST00000454555 TECPR2O15040 1411 aa17.89■□□□□ 0.45
LINC00343-203ENST00000454555 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
LINC00343-203ENST00000454555 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
LINC00343-203ENST00000454555 USP47Q96K76 1375 aa17.88■□□□□ 0.45
LINC00343-203ENST00000454555 CCDC184Q52MB2 194 aa17.88■□□□□ 0.45
LINC00343-203ENST00000454555 STK26Q9P289 416 aa17.87■□□□□ 0.45
LINC00343-203ENST00000454555 CHD2O14647 1828 aaKnown RBP17.87■□□□□ 0.45
LINC00343-203ENST00000454555 TRAK1Q9UPV9 953 aa17.86■□□□□ 0.45
LINC00343-203ENST00000454555 DLC1Q96QB1 1528 aa17.86■□□□□ 0.45
LINC00343-203ENST00000454555 NWD1Q149M9 1564 aa17.86■□□□□ 0.45
LINC00343-203ENST00000454555 ERICH6Q7L0X2 663 aa17.85■□□□□ 0.45
LINC00343-203ENST00000454555 XRN1Q8IZH2 1706 aaKnown RBP17.85■□□□□ 0.45
LINC00343-203ENST00000454555 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
LINC00343-203ENST00000454555 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
LINC00343-203ENST00000454555 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
LINC00343-203ENST00000454555 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.45
LINC00343-203ENST00000454555 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.44
LINC00343-203ENST00000454555 CPS1P31327 1500 aa17.83■□□□□ 0.44
LINC00343-203ENST00000454555 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
LINC00343-203ENST00000454555 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
LINC00343-203ENST00000454555 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
LINC00343-203ENST00000454555 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
LINC00343-203ENST00000454555 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
LINC00343-203ENST00000454555 PRAM1Q96QH2 718 aa17.8■□□□□ 0.44
LINC00343-203ENST00000454555 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
LINC00343-203ENST00000454555 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
LINC00343-203ENST00000454555 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
LINC00343-203ENST00000454555 WAPLQ7Z5K2 1190 aa17.79■□□□□ 0.44
LINC00343-203ENST00000454555 POGKQ9P215 609 aa17.79■□□□□ 0.44
LINC00343-203ENST00000454555 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
LINC00343-203ENST00000454555 PROSER2Q86WR7 435 aaPredicted RBP17.77■□□□□ 0.44
LINC00343-203ENST00000454555 BRD4O60885 1362 aaPredicted RBP17.77■□□□□ 0.44
LINC00343-203ENST00000454555 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.44
LINC00343-203ENST00000454555 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
LINC00343-203ENST00000454555 SBNO2Q9Y2G9 1366 aa17.76■□□□□ 0.43
LINC00343-203ENST00000454555 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
LINC00343-203ENST00000454555 RALBP1Q15311 655 aa17.75■□□□□ 0.43
LINC00343-203ENST00000454555 TESK2Q96S53 571 aa17.75■□□□□ 0.43
LINC00343-203ENST00000454555 LTBP4Q8N2S1 1624 aa17.74■□□□□ 0.43
LINC00343-203ENST00000454555 LRRC7Q96NW7 1537 aa17.73■□□□□ 0.43
LINC00343-203ENST00000454555 INSRP06213 1382 aa17.73■□□□□ 0.43
LINC00343-203ENST00000454555 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
LINC00343-203ENST00000454555 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00343-203ENST00000454555 B4GALNT3Q6L9W6 998 aa17.72■□□□□ 0.43
LINC00343-203ENST00000454555 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
LINC00343-203ENST00000454555 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.43
LINC00343-203ENST00000454555 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
LINC00343-203ENST00000454555 RBM33Q96EV2 1170 aaKnown RBP17.7■□□□□ 0.42
LINC00343-203ENST00000454555 QRICH2Q9H0J4 1663 aa17.7■□□□□ 0.42
LINC00343-203ENST00000454555 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.7■□□□□ 0.42
LINC00343-203ENST00000454555 MINK1Q8N4C8 1332 aaPredicted RBP17.69■□□□□ 0.42
LINC00343-203ENST00000454555 ADGRL3Q9HAR2 1447 aa17.69■□□□□ 0.42
LINC00343-203ENST00000454555 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
LINC00343-203ENST00000454555 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
LINC00343-203ENST00000454555 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
LINC00343-203ENST00000454555 TMF1P82094 1093 aa17.67■□□□□ 0.42
LINC00343-203ENST00000454555 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
LINC00343-203ENST00000454555 EVC2Q86UK5 1308 aa17.67■□□□□ 0.42
LINC00343-203ENST00000454555 WASLO00401 505 aaPredicted RBP17.66■□□□□ 0.42
LINC00343-203ENST00000454555 PDE3BQ13370 1112 aa17.66■□□□□ 0.42
LINC00343-203ENST00000454555 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
LINC00343-203ENST00000454555 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
LINC00343-203ENST00000454555 NALCNQ8IZF0 1738 aa17.64■□□□□ 0.41
LINC00343-203ENST00000454555 DCCP43146 1447 aa17.64■□□□□ 0.41
LINC00343-203ENST00000454555 CDK19Q9BWU1 502 aa17.64■□□□□ 0.41
LINC00343-203ENST00000454555 XIRP1Q702N8 1843 aaKnown RBP17.64■□□□□ 0.41
LINC00343-203ENST00000454555 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
LINC00343-203ENST00000454555 MSH6P52701 1360 aa17.64■□□□□ 0.41
LINC00343-203ENST00000454555 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
LINC00343-203ENST00000454555 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
LINC00343-203ENST00000454555 DISP3Q9P2K9 1392 aa17.63■□□□□ 0.41
LINC00343-203ENST00000454555 NOP58Q9Y2X3 529 aaKnown RBP17.62■□□□□ 0.41
LINC00343-203ENST00000454555 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
LINC00343-203ENST00000454555 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
LINC00343-203ENST00000454555 NLRP13Q86W25 1043 aa17.61■□□□□ 0.41
LINC00343-203ENST00000454555 IQSEC2Q5JU85 1478 aa17.6■□□□□ 0.41
LINC00343-203ENST00000454555 ATF3P18847 181 aa17.6■□□□□ 0.41
LINC00343-203ENST00000454555 ANP32AP39687 249 aaKnown RBP17.6■□□□□ 0.41
LINC00343-203ENST00000454555 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
LINC00343-203ENST00000454555 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
LINC00343-203ENST00000454555 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
LINC00343-203ENST00000454555 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.41
LINC00343-203ENST00000454555 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
LINC00343-203ENST00000454555 CERKQ8TCT0 537 aa17.58■□□□□ 0.4
LINC00343-203ENST00000454555 FMN2Q9NZ56 1722 aa17.57■□□□□ 0.4
LINC00343-203ENST00000454555 NUDT16Q96DE0 195 aaKnown RBP17.57■□□□□ 0.4
LINC00343-203ENST00000454555 PRR36Q9H6K5 1346 aa17.56■□□□□ 0.4
LINC00343-203ENST00000454555 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
LINC00343-203ENST00000454555 ATP7BP35670 1465 aa17.55■□□□□ 0.4
LINC00343-203ENST00000454555 MST1RQ04912 1400 aa17.55■□□□□ 0.4
LINC00343-203ENST00000454555 RRP1P56182 461 aaKnown RBP17.55■□□□□ 0.4
LINC00343-203ENST00000454555 IPO9Q96P70 1041 aaKnown RBP17.54■□□□□ 0.4
LINC00343-203ENST00000454555 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
LINC00343-203ENST00000454555 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
LINC00343-203ENST00000454555 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
LINC00343-203ENST00000454555 USP32Q8NFA0 1604 aa17.53■□□□□ 0.4
LINC00343-203ENST00000454555 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms