RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-215ENST00000453724 ADGRL3Q9HAR2 1447 aa8.92□□□□□ -0.98
RPE-215ENST00000453724 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
RPE-215ENST00000453724 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
RPE-215ENST00000453724 SRCAPQ6ZRS2 3230 aa8.91□□□□□ -0.98
RPE-215ENST00000453724 MSH6P52701 1360 aa8.91□□□□□ -0.98
RPE-215ENST00000453724 PROSER2Q86WR7 435 aaPredicted RBP8.91□□□□□ -0.98
RPE-215ENST00000453724 AMOTL2Q9Y2J4 779 aa8.91□□□□□ -0.98
RPE-215ENST00000453724 KDM2AQ9Y2K7 1162 aa8.91□□□□□ -0.98
RPE-215ENST00000453724 EIF3AQ14152 1382 aaKnown RBP8.9□□□□□ -0.98
RPE-215ENST00000453724 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
RPE-215ENST00000453724 KIF1AQ12756 1690 aa8.9□□□□□ -0.98
RPE-215ENST00000453724 RGPD8O14715 1765 aaPredicted RBP8.89□□□□□ -0.99
RPE-215ENST00000453724 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
RPE-215ENST00000453724 GPRASP1Q5JY77 1395 aa8.89□□□□□ -0.99
RPE-215ENST00000453724 CFAP70Q5T0N1 1121 aa8.89□□□□□ -0.99
RPE-215ENST00000453724 ROBO2Q9HCK4 1378 aa8.88□□□□□ -0.99
RPE-215ENST00000453724 UPF1Q92900 1129 aaKnown RBP eCLIP8.88□□□□□ -0.99
RPE-215ENST00000453724 NHSL1Q5SYE7 1610 aa8.87□□□□□ -0.99
RPE-215ENST00000453724 JCADQ9P266 1359 aa8.87□□□□□ -0.99
RPE-215ENST00000453724 C19orf44Q9H6X5 657 aa8.87□□□□□ -0.99
RPE-215ENST00000453724 SLAIN2Q9P270 581 aa8.87□□□□□ -0.99
RPE-215ENST00000453724 SHPRHQ149N8 1683 aa8.87□□□□□ -0.99
RPE-215ENST00000453724 TOPAZ1Q8N9V7 1692 aa8.87□□□□□ -0.99
RPE-215ENST00000453724 C14orf37Q86TY3 774 aa8.86□□□□□ -0.99
RPE-215ENST00000453724 CADPS2Q86UW7 1296 aa8.86□□□□□ -0.99
RPE-215ENST00000453724 ATF3P18847 181 aa8.85□□□□□ -0.99
RPE-215ENST00000453724 TMEM132EQ6IEE7 984 aa8.85□□□□□ -0.99
RPE-215ENST00000453724 SBNO2Q9Y2G9 1366 aa8.85□□□□□ -0.99
RPE-215ENST00000453724 TULP4Q9NRJ4 1543 aa8.85□□□□□ -0.99
RPE-215ENST00000453724 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
RPE-215ENST00000453724 MST1RQ04912 1400 aa8.84□□□□□ -0.99
RPE-215ENST00000453724 ANKARQ7Z5J8 1434 aa8.84□□□□□ -0.99
RPE-215ENST00000453724 USP32Q8NFA0 1604 aa8.83□□□□□ -1
RPE-215ENST00000453724 SLC24A1O60721 1099 aa8.83□□□□□ -1
RPE-215ENST00000453724 POGKQ9P215 609 aa8.83□□□□□ -1
RPE-215ENST00000453724 STK26Q9P289 416 aa8.83□□□□□ -1
RPE-215ENST00000453724 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
RPE-215ENST00000453724 NBPF8Q3BBV2 869 aa8.82□□□□□ -1
RPE-215ENST00000453724 MEX3CQ5U5Q3 659 aaKnown RBP8.82□□□□□ -1
RPE-215ENST00000453724 PRAM1Q96QH2 718 aa8.82□□□□□ -1
RPE-215ENST00000453724 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
RPE-215ENST00000453724 AKAP12Q02952 1782 aa8.81□□□□□ -1
RPE-215ENST00000453724 NBPF1Q3BBV0 1214 aa8.81□□□□□ -1
RPE-215ENST00000453724 CARD11Q9BXL7 1154 aa8.81□□□□□ -1
RPE-215ENST00000453724 PLEKHH1Q9ULM0 1364 aa8.81□□□□□ -1
RPE-215ENST00000453724 C1orf167Q5SNV9 1468 aa8.81□□□□□ -1
RPE-215ENST00000453724 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
RPE-215ENST00000453724 NUTM2BA6NNL0 878 aaPredicted RBP8.8□□□□□ -1
RPE-215ENST00000453724 NUTM2EB1AL46 878 aaPredicted RBP8.8□□□□□ -1
RPE-215ENST00000453724 ZNF772Q68DY9 489 aaPredicted RBP8.8□□□□□ -1
RPE-215ENST00000453724 NUTM2AQ8IVF1 878 aaPredicted RBP8.8□□□□□ -1
RPE-215ENST00000453724 ATP7BP35670 1465 aa8.79□□□□□ -1
RPE-215ENST00000453724 USP47Q96K76 1375 aa8.79□□□□□ -1
RPE-215ENST00000453724 RXRBP28702 533 aa8.79□□□□□ -1
RPE-215ENST00000453724 WAPLQ7Z5K2 1190 aa8.79□□□□□ -1
RPE-215ENST00000453724 RGS12O14924 1447 aa8.79□□□□□ -1
RPE-215ENST00000453724 AFF2P51816 1311 aa8.79□□□□□ -1
RPE-215ENST00000453724 CDK12Q9NYV4 1490 aaPredicted RBP8.78□□□□□ -1
RPE-215ENST00000453724 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
RPE-215ENST00000453724 BRINP3Q76B58 766 aa8.78□□□□□ -1
RPE-215ENST00000453724 EP400Q96L91 3159 aa8.77□□□□□ -1
RPE-215ENST00000453724 TRPM3Q9HCF6 1732 aaPredicted RBP8.77□□□□□ -1
RPE-215ENST00000453724 MARF1Q9Y4F3 1742 aaKnown RBP8.77□□□□□ -1
RPE-215ENST00000453724 COL22A1Q8NFW1 1626 aaPredicted RBP8.77□□□□□ -1.01
RPE-215ENST00000453724 WASLO00401 505 aaPredicted RBP8.77□□□□□ -1.01
RPE-215ENST00000453724 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
RPE-215ENST00000453724 EVC2Q86UK5 1308 aa8.77□□□□□ -1.01
RPE-215ENST00000453724 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
RPE-215ENST00000453724 NINLQ9Y2I6 1382 aa8.76□□□□□ -1.01
RPE-215ENST00000453724 MYOM1P52179 1685 aa8.76□□□□□ -1.01
RPE-215ENST00000453724 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
RPE-215ENST00000453724 SAFB2Q14151 953 aaKnown RBP eCLIP8.76□□□□□ -1.01
RPE-215ENST00000453724 NPHP3Q7Z494 1330 aa8.76□□□□□ -1.01
RPE-215ENST00000453724 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
RPE-215ENST00000453724 ABCA3Q99758 1704 aa8.75□□□□□ -1.01
RPE-215ENST00000453724 NRKQ7Z2Y5 1582 aa8.75□□□□□ -1.01
RPE-215ENST00000453724 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
RPE-215ENST00000453724 PXDNQ92626 1479 aa8.75□□□□□ -1.01
RPE-215ENST00000453724 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
RPE-215ENST00000453724 USP54Q70EL1 1684 aa8.74□□□□□ -1.01
RPE-215ENST00000453724 CRYBG1Q9Y4K1 1723 aa8.74□□□□□ -1.01
RPE-215ENST00000453724 BRD4O60885 1362 aaPredicted RBP8.73□□□□□ -1.01
RPE-215ENST00000453724 PNPLA6Q8IY17 1366 aa8.73□□□□□ -1.01
RPE-215ENST00000453724 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
RPE-215ENST00000453724 EIF4G2P78344 907 aaKnown RBP eCLIP8.73□□□□□ -1.01
RPE-215ENST00000453724 CDCA8Q53HL2 280 aa8.73□□□□□ -1.01
RPE-215ENST00000453724 HIRIP3Q9BW71 556 aaPredicted RBP8.73□□□□□ -1.01
RPE-215ENST00000453724 KIF20BQ96Q89 1820 aa8.73□□□□□ -1.01
RPE-215ENST00000453724 POLR3AO14802 1390 aaPredicted RBP8.73□□□□□ -1.01
RPE-215ENST00000453724 PPIP5K1Q6PFW1 1433 aa8.72□□□□□ -1.01
RPE-215ENST00000453724 TMF1P82094 1093 aa8.72□□□□□ -1.01
RPE-215ENST00000453724 ESCO1Q5FWF5 840 aa8.72□□□□□ -1.01
RPE-215ENST00000453724 CDK19Q9BWU1 502 aa8.72□□□□□ -1.01
RPE-215ENST00000453724 QTRT2Q9H974 415 aaKnown RBP8.72□□□□□ -1.01
RPE-215ENST00000453724 CCDC61Q9Y6R9 512 aa8.72□□□□□ -1.01
RPE-215ENST00000453724 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.02
RPE-215ENST00000453724 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.02
RPE-215ENST00000453724 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.02
RPE-215ENST00000453724 TESK2Q96S53 571 aa8.71□□□□□ -1.02
RPE-215ENST00000453724 PHF8Q9UPP1 1060 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms