RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 PANK3Q9H999 370 aa13.98□□□□□ -0.17
CHL1-208ENST00000453040 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
CHL1-208ENST00000453040 IFT140Q96RY7 1462 aa13.98□□□□□ -0.17
CHL1-208ENST00000453040 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
CHL1-208ENST00000453040 INO80Q9ULG1 1556 aaPredicted RBP13.97□□□□□ -0.17
CHL1-208ENST00000453040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHL1-208ENST00000453040 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
CHL1-208ENST00000453040 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
CHL1-208ENST00000453040 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
CHL1-208ENST00000453040 CLTCL1P53675 1640 aa13.96□□□□□ -0.18
CHL1-208ENST00000453040 GRPEL1Q9HAV7 217 aa13.95□□□□□ -0.18
CHL1-208ENST00000453040 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
CHL1-208ENST00000453040 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
CHL1-208ENST00000453040 PPP1R9BQ96SB3 815 aa13.95□□□□□ -0.18
CHL1-208ENST00000453040 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
CHL1-208ENST00000453040 USP32Q8NFA0 1604 aa13.95□□□□□ -0.18
CHL1-208ENST00000453040 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
CHL1-208ENST00000453040 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
CHL1-208ENST00000453040 ADGRB2O60241 1585 aa13.94□□□□□ -0.18
CHL1-208ENST00000453040 TEX2Q8IWB9 1127 aa13.94□□□□□ -0.18
CHL1-208ENST00000453040 SYCP2Q9BX26 1530 aa13.94□□□□□ -0.18
CHL1-208ENST00000453040 ATP2B3Q16720 1220 aa13.94□□□□□ -0.18
CHL1-208ENST00000453040 TRPM2O94759 1503 aa13.93□□□□□ -0.18
CHL1-208ENST00000453040 RGS22Q8NE09 1264 aa13.93□□□□□ -0.18
CHL1-208ENST00000453040 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
CHL1-208ENST00000453040 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
CHL1-208ENST00000453040 DHX37Q8IY37 1157 aaKnown RBP13.92□□□□□ -0.18
CHL1-208ENST00000453040 BCAR3O75815 825 aa13.92□□□□□ -0.18
CHL1-208ENST00000453040 MCM4P33991 863 aa13.91□□□□□ -0.18
CHL1-208ENST00000453040 TBC1D32Q96NH3 1257 aa13.91□□□□□ -0.18
CHL1-208ENST00000453040 ARXQ96QS3 562 aa13.91□□□□□ -0.18
CHL1-208ENST00000453040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHL1-208ENST00000453040 MRE11P49959 708 aa13.91□□□□□ -0.18
CHL1-208ENST00000453040 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
CHL1-208ENST00000453040 PPRC1Q5VV67 1664 aaKnown RBP13.9□□□□□ -0.18
CHL1-208ENST00000453040 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
CHL1-208ENST00000453040 PTPRTO14522 1441 aa13.89□□□□□ -0.19
CHL1-208ENST00000453040 CCDC94Q9BW85 323 aaPredicted RBP13.89□□□□□ -0.19
CHL1-208ENST00000453040 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
CHL1-208ENST00000453040 TBC1D2Q9BYX2 928 aa13.89□□□□□ -0.19
CHL1-208ENST00000453040 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
CHL1-208ENST00000453040 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
CHL1-208ENST00000453040 SOX12O15370 315 aa13.88□□□□□ -0.19
CHL1-208ENST00000453040 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
CHL1-208ENST00000453040 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
CHL1-208ENST00000453040 GZF1Q9H116 711 aaPredicted RBP13.87□□□□□ -0.19
CHL1-208ENST00000453040 KANK1Q14678 1352 aa13.87□□□□□ -0.19
CHL1-208ENST00000453040 NINLQ9Y2I6 1382 aa13.87□□□□□ -0.19
CHL1-208ENST00000453040 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
CHL1-208ENST00000453040 KIF20AO95235 890 aa13.86□□□□□ -0.19
CHL1-208ENST00000453040 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
CHL1-208ENST00000453040 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
CHL1-208ENST00000453040 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
CHL1-208ENST00000453040 MAP3K4Q9Y6R4 1608 aa13.85□□□□□ -0.19
CHL1-208ENST00000453040 ZNF500O60304 480 aaPredicted RBP13.85□□□□□ -0.19
CHL1-208ENST00000453040 PSEN1P49768 467 aa13.85□□□□□ -0.19
CHL1-208ENST00000453040 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
CHL1-208ENST00000453040 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
CHL1-208ENST00000453040 MMP14P50281 582 aa13.85□□□□□ -0.19
CHL1-208ENST00000453040 CAPN2P17655 700 aa13.84□□□□□ -0.19
CHL1-208ENST00000453040 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
CHL1-208ENST00000453040 TRAK2O60296 914 aa13.84□□□□□ -0.19
CHL1-208ENST00000453040 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
CHL1-208ENST00000453040 SLC20A2Q08357 652 aa13.83□□□□□ -0.2
CHL1-208ENST00000453040 RLBP1P12271 317 aa13.83□□□□□ -0.2
CHL1-208ENST00000453040 TET3O43151 1660 aa13.82□□□□□ -0.2
CHL1-208ENST00000453040 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
CHL1-208ENST00000453040 PDLIM2Q96JY6 352 aa13.82□□□□□ -0.2
CHL1-208ENST00000453040 TSC1Q92574 1164 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 CHMP4AQ9BY43 222 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 HNRNPMP52272 730 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHL1-208ENST00000453040 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
CHL1-208ENST00000453040 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 CARD14Q9BXL6 1004 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 UQCRHP07919 91 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 ZSCAN30Q86W11 494 aa13.81□□□□□ -0.2
CHL1-208ENST00000453040 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
CHL1-208ENST00000453040 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
CHL1-208ENST00000453040 ARID3AQ99856 593 aa13.8□□□□□ -0.2
CHL1-208ENST00000453040 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
CHL1-208ENST00000453040 AK9Q5TCS8 1911 aa13.8□□□□□ -0.2
CHL1-208ENST00000453040 TMF1P82094 1093 aa13.79□□□□□ -0.2
CHL1-208ENST00000453040 ABCC1P33527 1531 aa13.79□□□□□ -0.2
CHL1-208ENST00000453040 TULP2O00295 520 aa13.79□□□□□ -0.2
CHL1-208ENST00000453040 MYOM2P54296 1465 aa13.79□□□□□ -0.2
CHL1-208ENST00000453040 CGNL1Q0VF96 1302 aa13.78□□□□□ -0.2
CHL1-208ENST00000453040 DYNC1I1O14576 645 aa13.78□□□□□ -0.2
CHL1-208ENST00000453040 R3HCC1Q9Y3T6 440 aaKnown RBP13.78□□□□□ -0.2
CHL1-208ENST00000453040 NGEFQ8N5V2 710 aa13.78□□□□□ -0.2
CHL1-208ENST00000453040 E9PSI1 815 aa13.77□□□□□ -0.2
CHL1-208ENST00000453040 CFAP74Q9C0B2 1584 aa13.77□□□□□ -0.2
CHL1-208ENST00000453040 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.2
CHL1-208ENST00000453040 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
CHL1-208ENST00000453040 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
CHL1-208ENST00000453040 LETM1O95202 739 aaPredicted RBP13.76□□□□□ -0.21
CHL1-208ENST00000453040 BRD2P25440 801 aaKnown RBP13.76□□□□□ -0.21
CHL1-208ENST00000453040 PANK1Q8TE04 598 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms