RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-216ENST00000452375 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
COPS7B-216ENST00000452375 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
COPS7B-216ENST00000452375 POTECB2RU33 542 aa13.19□□□□□ -0.3
COPS7B-216ENST00000452375 ZNF775Q96BV0 537 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-216ENST00000452375 PKD2L1Q9P0L9 805 aa13.19□□□□□ -0.3
COPS7B-216ENST00000452375 ST8SIA5O15466 376 aa13.18□□□□□ -0.3
COPS7B-216ENST00000452375 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
COPS7B-216ENST00000452375 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
COPS7B-216ENST00000452375 BRICD5Q6PL45 260 aa13.15□□□□□ -0.3
COPS7B-216ENST00000452375 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
COPS7B-216ENST00000452375 RPIAP49247 311 aa13.14□□□□□ -0.31
COPS7B-216ENST00000452375 CD2BP2O95400 341 aaKnown RBP13.13□□□□□ -0.31
COPS7B-216ENST00000452375 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
COPS7B-216ENST00000452375 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-216ENST00000452375 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
COPS7B-216ENST00000452375 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
COPS7B-216ENST00000452375 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
COPS7B-216ENST00000452375 AAASQ9NRG9 546 aa13.11□□□□□ -0.31
COPS7B-216ENST00000452375 CD46P15529 392 aa13.1□□□□□ -0.31
COPS7B-216ENST00000452375 CYP4X1Q8N118 509 aa13.1□□□□□ -0.31
COPS7B-216ENST00000452375 HLA-CQ95604 372 aa13.1□□□□□ -0.31
COPS7B-216ENST00000452375 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
COPS7B-216ENST00000452375 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-216ENST00000452375 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
COPS7B-216ENST00000452375 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
COPS7B-216ENST00000452375 IRF6O14896 467 aa13.07□□□□□ -0.32
COPS7B-216ENST00000452375 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
COPS7B-216ENST00000452375 KDM4AO75164 1064 aa13.06□□□□□ -0.32
COPS7B-216ENST00000452375 Q3C1V9 767 aa13.06□□□□□ -0.32
COPS7B-216ENST00000452375 TOR4AQ9NXH8 423 aa13.05□□□□□ -0.32
COPS7B-216ENST00000452375 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
COPS7B-216ENST00000452375 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-216ENST00000452375 TTC24A2A3L6 582 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-216ENST00000452375 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
COPS7B-216ENST00000452375 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
COPS7B-216ENST00000452375 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
COPS7B-216ENST00000452375 GUCA2AQ02747 115 aa13.02□□□□□ -0.33
COPS7B-216ENST00000452375 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
COPS7B-216ENST00000452375 WDR62O43379 1518 aa13.02□□□□□ -0.33
COPS7B-216ENST00000452375 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
COPS7B-216ENST00000452375 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
COPS7B-216ENST00000452375 TRIM32Q13049 653 aa13□□□□□ -0.33
COPS7B-216ENST00000452375 AXIN1O15169 862 aa12.99□□□□□ -0.33
COPS7B-216ENST00000452375 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
COPS7B-216ENST00000452375 MMP16P51512 607 aa12.98□□□□□ -0.33
COPS7B-216ENST00000452375 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
COPS7B-216ENST00000452375 HOXA2O43364 376 aa12.97□□□□□ -0.33
COPS7B-216ENST00000452375 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
COPS7B-216ENST00000452375 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
COPS7B-216ENST00000452375 GMPR2Q9P2T1 348 aaKnown RBP12.96□□□□□ -0.33
COPS7B-216ENST00000452375 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
COPS7B-216ENST00000452375 AVPP01185 164 aa12.95□□□□□ -0.34
COPS7B-216ENST00000452375 USP46P62068 366 aa12.95□□□□□ -0.34
COPS7B-216ENST00000452375 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
COPS7B-216ENST00000452375 WNT7AO00755 349 aa12.94□□□□□ -0.34
COPS7B-216ENST00000452375 CRIPAKQ8N1N5 446 aa12.94□□□□□ -0.34
COPS7B-216ENST00000452375 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
COPS7B-216ENST00000452375 FAM217BQ9NTX9 383 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-216ENST00000452375 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 J3QL48 77 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 SMPD1P17405 629 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 CLCN1P35523 988 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
COPS7B-216ENST00000452375 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
COPS7B-216ENST00000452375 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
COPS7B-216ENST00000452375 CTC1Q2NKJ3 1217 aa12.9□□□□□ -0.34
COPS7B-216ENST00000452375 REPIN1Q9BWE0 567 aaKnown RBP12.88□□□□□ -0.35
COPS7B-216ENST00000452375 JUNDP17535 347 aa12.87□□□□□ -0.35
COPS7B-216ENST00000452375 SKOR1P84550 965 aa12.87□□□□□ -0.35
COPS7B-216ENST00000452375 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
COPS7B-216ENST00000452375 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
COPS7B-216ENST00000452375 SMCPP49901 116 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-216ENST00000452375 TREML4Q6UXN2 200 aa12.85□□□□□ -0.35
COPS7B-216ENST00000452375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPS7B-216ENST00000452375 HPS1Q92902 700 aa12.85□□□□□ -0.35
COPS7B-216ENST00000452375 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
COPS7B-216ENST00000452375 FDX1P10109 184 aa12.83□□□□□ -0.36
COPS7B-216ENST00000452375 FANCD2Q9BXW9 1451 aa12.83□□□□□ -0.36
COPS7B-216ENST00000452375 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
COPS7B-216ENST00000452375 RETREG3Q86VR2 466 aa12.82□□□□□ -0.36
COPS7B-216ENST00000452375 NUDT12Q9BQG2 462 aa12.82□□□□□ -0.36
COPS7B-216ENST00000452375 ATP13A2Q9NQ11 1180 aa12.82□□□□□ -0.36
COPS7B-216ENST00000452375 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
COPS7B-216ENST00000452375 SSTR3P32745 418 aaPredicted RBP12.81□□□□□ -0.36
COPS7B-216ENST00000452375 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
COPS7B-216ENST00000452375 PTCRAQ6ISU1 281 aaPredicted RBP12.81□□□□□ -0.36
COPS7B-216ENST00000452375 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
COPS7B-216ENST00000452375 NDUFV2P19404 249 aa12.79□□□□□ -0.36
COPS7B-216ENST00000452375 WNT7BP56706 349 aa12.79□□□□□ -0.36
COPS7B-216ENST00000452375 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
COPS7B-216ENST00000452375 SNRPBP14678 240 aaKnown RBP12.78□□□□□ -0.36
COPS7B-216ENST00000452375 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
COPS7B-216ENST00000452375 WFS1O76024 890 aa12.77□□□□□ -0.37
COPS7B-216ENST00000452375 LCE2AQ5TA79 106 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-216ENST00000452375 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
COPS7B-216ENST00000452375 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms