RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 NEURL4Q96JN8 1562 aa21.84■■□□□ 1.09
SCUBE2-202ENST00000450649 NGEFQ8N5V2 710 aa21.84■■□□□ 1.09
SCUBE2-202ENST00000450649 TET3O43151 1660 aa21.84■■□□□ 1.09
SCUBE2-202ENST00000450649 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
SCUBE2-202ENST00000450649 MRE11P49959 708 aa21.83■■□□□ 1.09
SCUBE2-202ENST00000450649 PMFBP1Q8TBY8 1022 aa21.83■■□□□ 1.09
SCUBE2-202ENST00000450649 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.08
SCUBE2-202ENST00000450649 PDZRN3Q9UPQ7 1066 aa21.82■■□□□ 1.08
SCUBE2-202ENST00000450649 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
SCUBE2-202ENST00000450649 PCDHB15Q9Y5E8 787 aa21.81■■□□□ 1.08
SCUBE2-202ENST00000450649 CHMP5Q9NZZ3 219 aa21.81■■□□□ 1.08
SCUBE2-202ENST00000450649 ZMYM3Q14202 1370 aa21.81■■□□□ 1.08
SCUBE2-202ENST00000450649 VWDEQ8N2E2 1590 aa21.8■■□□□ 1.08
SCUBE2-202ENST00000450649 KANK1Q14678 1352 aa21.79■■□□□ 1.08
SCUBE2-202ENST00000450649 ERVK-7P63135 1459 aa21.78■■□□□ 1.08
SCUBE2-202ENST00000450649 MYH16Q9H6N6 1097 aa21.78■■□□□ 1.08
SCUBE2-202ENST00000450649 GRPEL1Q9HAV7 217 aa21.78■■□□□ 1.08
SCUBE2-202ENST00000450649 ESPNB1AK53 854 aa21.77■■□□□ 1.08
SCUBE2-202ENST00000450649 MYOM2P54296 1465 aa21.77■■□□□ 1.08
SCUBE2-202ENST00000450649 WWC1Q8IX03 1113 aa21.76■■□□□ 1.07
SCUBE2-202ENST00000450649 MAP3K4Q9Y6R4 1608 aa21.75■■□□□ 1.07
SCUBE2-202ENST00000450649 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
SCUBE2-202ENST00000450649 RLBP1P12271 317 aa21.75■■□□□ 1.07
SCUBE2-202ENST00000450649 AAMPQ13685 434 aa21.75■■□□□ 1.07
SCUBE2-202ENST00000450649 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
SCUBE2-202ENST00000450649 CARD14Q9BXL6 1004 aa21.75■■□□□ 1.07
SCUBE2-202ENST00000450649 TNNQ9UQP3 1299 aa21.74■■□□□ 1.07
SCUBE2-202ENST00000450649 RARSP54136 660 aaKnown RBP21.73■■□□□ 1.07
SCUBE2-202ENST00000450649 C22orf23Q9BZE7 217 aa21.73■■□□□ 1.07
SCUBE2-202ENST00000450649 POLR3AO14802 1390 aaPredicted RBP21.73■■□□□ 1.07
SCUBE2-202ENST00000450649 ATP7AQ04656 1500 aa21.72■■□□□ 1.07
SCUBE2-202ENST00000450649 RWDD1Q9H446 243 aaPredicted RBP21.72■■□□□ 1.07
SCUBE2-202ENST00000450649 ABCA6Q8N139 1617 aa21.72■■□□□ 1.07
SCUBE2-202ENST00000450649 INO80Q9ULG1 1556 aaPredicted RBP21.72■■□□□ 1.07
SCUBE2-202ENST00000450649 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
SCUBE2-202ENST00000450649 DDX11L8A8MPP1 907 aa21.71■■□□□ 1.07
SCUBE2-202ENST00000450649 MFAP1P55081 439 aaKnown RBP21.71■■□□□ 1.07
SCUBE2-202ENST00000450649 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
SCUBE2-202ENST00000450649 ADGRF5Q8IZF2 1346 aa21.7■■□□□ 1.06
SCUBE2-202ENST00000450649 KIF3BO15066 747 aa21.7■■□□□ 1.06
SCUBE2-202ENST00000450649 BCL2L13Q9BXK5 485 aa21.68■■□□□ 1.06
SCUBE2-202ENST00000450649 TRIM44Q96DX7 344 aaPredicted RBP21.68■■□□□ 1.06
SCUBE2-202ENST00000450649 ZNF692Q9BU19 519 aaPredicted RBP21.68■■□□□ 1.06
SCUBE2-202ENST00000450649 MYO3AQ8NEV4 1616 aa21.67■■□□□ 1.06
SCUBE2-202ENST00000450649 NEUROD2Q15784 382 aa21.67■■□□□ 1.06
SCUBE2-202ENST00000450649 NRXN1Q9ULB1 1477 aa21.67■■□□□ 1.06
SCUBE2-202ENST00000450649 HSCBQ8IWL3 235 aa21.66■■□□□ 1.06
SCUBE2-202ENST00000450649 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
SCUBE2-202ENST00000450649 UGGT1Q9NYU2 1555 aa21.66■■□□□ 1.06
SCUBE2-202ENST00000450649 FANCAO15360 1455 aa21.65■■□□□ 1.06
SCUBE2-202ENST00000450649 IFT172Q9UG01 1749 aa21.64■■□□□ 1.06
SCUBE2-202ENST00000450649 ABCA9Q8IUA7 1624 aa21.64■■□□□ 1.06
SCUBE2-202ENST00000450649 RRP7AQ9Y3A4 280 aaKnown RBP21.64■■□□□ 1.06
SCUBE2-202ENST00000450649 KIF1BO60333 1816 aa21.64■■□□□ 1.05
SCUBE2-202ENST00000450649 GAS2L3Q86XJ1 694 aa21.64■■□□□ 1.05
SCUBE2-202ENST00000450649 EFCAB6Q5THR3 1501 aa21.63■■□□□ 1.05
SCUBE2-202ENST00000450649 TPM2P07951 284 aa21.62■■□□□ 1.05
SCUBE2-202ENST00000450649 DDIT3P35638 169 aa21.61■■□□□ 1.05
SCUBE2-202ENST00000450649 SETBP1Q9Y6X0 1596 aa21.6■■□□□ 1.05
SCUBE2-202ENST00000450649 NCOA3Q9Y6Q9 1424 aa21.6■■□□□ 1.05
SCUBE2-202ENST00000450649 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 RUNDC1Q96C34 613 aa21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 MORC1Q86VD1 984 aa21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 TNPO1Q92973 898 aaKnown RBP21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
SCUBE2-202ENST00000450649 TCP11L2Q8N4U5 519 aa21.58■■□□□ 1.05
SCUBE2-202ENST00000450649 MROH2AA6NES4 1674 aa21.57■■□□□ 1.04
SCUBE2-202ENST00000450649 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
SCUBE2-202ENST00000450649 IQSEC2Q5JU85 1478 aa21.56■■□□□ 1.04
SCUBE2-202ENST00000450649 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
SCUBE2-202ENST00000450649 PDCL3Q9H2J4 239 aa21.56■■□□□ 1.04
SCUBE2-202ENST00000450649 ADGRB3O60242 1522 aa21.56■■□□□ 1.04
SCUBE2-202ENST00000450649 NOS1P29475 1434 aa21.56■■□□□ 1.04
SCUBE2-202ENST00000450649 PPRC1Q5VV67 1664 aaKnown RBP21.55■■□□□ 1.04
SCUBE2-202ENST00000450649 GBP4Q96PP9 640 aa21.55■■□□□ 1.04
SCUBE2-202ENST00000450649 KIAA1211Q6ZU35 1233 aa21.54■■□□□ 1.04
SCUBE2-202ENST00000450649 CCDC27Q2M243 656 aa21.53■■□□□ 1.04
SCUBE2-202ENST00000450649 SKOR2Q2VWA4 1001 aaPredicted RBP21.53■■□□□ 1.04
SCUBE2-202ENST00000450649 SMC5Q8IY18 1101 aa21.53■■□□□ 1.04
SCUBE2-202ENST00000450649 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
SCUBE2-202ENST00000450649 SNX21Q969T3 373 aa21.53■■□□□ 1.04
SCUBE2-202ENST00000450649 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
SCUBE2-202ENST00000450649 ZKSCAN2Q63HK3 967 aa21.52■■□□□ 1.04
SCUBE2-202ENST00000450649 DZIP1LQ8IYY4 767 aaKnown RBP21.52■■□□□ 1.04
SCUBE2-202ENST00000450649 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.04
SCUBE2-202ENST00000450649 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
SCUBE2-202ENST00000450649 CIZ1Q9ULV3 898 aaPredicted RBP21.52■■□□□ 1.04
SCUBE2-202ENST00000450649 RBM25P49756 843 aaKnown RBP21.52■■□□□ 1.03
SCUBE2-202ENST00000450649 RAB3GAP1Q15042 981 aa21.52■■□□□ 1.03
SCUBE2-202ENST00000450649 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.03
SCUBE2-202ENST00000450649 USP32Q8NFA0 1604 aa21.51■■□□□ 1.03
SCUBE2-202ENST00000450649 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
SCUBE2-202ENST00000450649 ZNF518AQ6AHZ1 1483 aa21.5■■□□□ 1.03
SCUBE2-202ENST00000450649 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
SCUBE2-202ENST00000450649 HDAC1Q13547 482 aaPredicted RBP21.5■■□□□ 1.03
SCUBE2-202ENST00000450649 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
SCUBE2-202ENST00000450649 CCDC173Q0VFZ6 552 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms