RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
HCG18-238ENST00000449544 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
HCG18-238ENST00000449544 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
HCG18-238ENST00000449544 KAT6BQ8WYB5 2073 aa11.03□□□□□ -0.64
HCG18-238ENST00000449544 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
HCG18-238ENST00000449544 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.64
HCG18-238ENST00000449544 DIP2BQ9P265 1576 aa11.02□□□□□ -0.65
HCG18-238ENST00000449544 ARAP3Q8WWN8 1544 aa11.02□□□□□ -0.65
HCG18-238ENST00000449544 UGGT1Q9NYU2 1555 aa11.01□□□□□ -0.65
HCG18-238ENST00000449544 APBA3O96018 575 aa11.01□□□□□ -0.65
HCG18-238ENST00000449544 DIEXFQ68CQ4 756 aaKnown RBP11.01□□□□□ -0.65
HCG18-238ENST00000449544 PANK3Q9H999 370 aa11.01□□□□□ -0.65
HCG18-238ENST00000449544 STK32BQ9NY57 414 aa11.01□□□□□ -0.65
HCG18-238ENST00000449544 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
HCG18-238ENST00000449544 CABP4P57796 275 aa11□□□□□ -0.65
HCG18-238ENST00000449544 ATAD2Q6PL18 1390 aa11□□□□□ -0.65
HCG18-238ENST00000449544 PTPN23Q9H3S7 1636 aa11□□□□□ -0.65
HCG18-238ENST00000449544 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
HCG18-238ENST00000449544 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
HCG18-238ENST00000449544 ITSN2Q9NZM3 1697 aa10.99□□□□□ -0.65
HCG18-238ENST00000449544 ACEP12821 1306 aa10.99□□□□□ -0.65
HCG18-238ENST00000449544 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
HCG18-238ENST00000449544 NLRP1Q9C000 1473 aa10.99□□□□□ -0.65
HCG18-238ENST00000449544 COL17A1Q9UMD9 1497 aaPredicted RBP10.99□□□□□ -0.65
HCG18-238ENST00000449544 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
HCG18-238ENST00000449544 AFF2P51816 1311 aa10.99□□□□□ -0.65
HCG18-238ENST00000449544 RBM6P78332 1123 aaKnown RBP10.98□□□□□ -0.65
HCG18-238ENST00000449544 CALD1Q05682 793 aaKnown RBP10.98□□□□□ -0.65
HCG18-238ENST00000449544 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
HCG18-238ENST00000449544 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
HCG18-238ENST00000449544 AK7Q96M32 723 aa10.98□□□□□ -0.65
HCG18-238ENST00000449544 STK31Q9BXU1 1019 aa10.98□□□□□ -0.65
HCG18-238ENST00000449544 TFCP2L1Q9NZI6 479 aa10.98□□□□□ -0.65
HCG18-238ENST00000449544 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
HCG18-238ENST00000449544 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
HCG18-238ENST00000449544 LMOD3Q0VAK6 560 aa10.97□□□□□ -0.65
HCG18-238ENST00000449544 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
HCG18-238ENST00000449544 FAM177BA6PVY3 158 aa10.97□□□□□ -0.65
HCG18-238ENST00000449544 FRAT2O75474 233 aaPredicted RBP10.96□□□□□ -0.65
HCG18-238ENST00000449544 MYH16Q9H6N6 1097 aa10.96□□□□□ -0.65
HCG18-238ENST00000449544 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.65
HCG18-238ENST00000449544 CFAP65Q6ZU64 1925 aaKnown RBP10.96□□□□□ -0.66
HCG18-238ENST00000449544 JCADQ9P266 1359 aa10.96□□□□□ -0.66
HCG18-238ENST00000449544 USP47Q96K76 1375 aa10.95□□□□□ -0.66
HCG18-238ENST00000449544 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
HCG18-238ENST00000449544 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
HCG18-238ENST00000449544 MYO5CQ9NQX4 1742 aa10.95□□□□□ -0.66
HCG18-238ENST00000449544 MTHFSP49914 203 aa10.95□□□□□ -0.66
HCG18-238ENST00000449544 HMOX1P09601 288 aa10.95□□□□□ -0.66
HCG18-238ENST00000449544 EIF2S2P20042 333 aaKnown RBP10.94□□□□□ -0.66
HCG18-238ENST00000449544 OS9Q13438 667 aaPredicted RBP10.94□□□□□ -0.66
HCG18-238ENST00000449544 RRS1Q15050 365 aaKnown RBP10.94□□□□□ -0.66
HCG18-238ENST00000449544 GPR162Q16538 588 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 SAMD9Q5K651 1589 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 NAIPQ13075 1403 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 KRT27Q7Z3Y8 459 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
HCG18-238ENST00000449544 NPATQ14207 1427 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 ARHGEF10O15013 1369 aa10.94□□□□□ -0.66
HCG18-238ENST00000449544 PTCD1O75127 700 aaKnown RBP10.93□□□□□ -0.66
HCG18-238ENST00000449544 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
HCG18-238ENST00000449544 ZPR1O75312 459 aa10.93□□□□□ -0.66
HCG18-238ENST00000449544 MAP3K1Q13233 1512 aa10.93□□□□□ -0.66
HCG18-238ENST00000449544 GCP02774 474 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 C16orf71Q8IYS4 520 aaPredicted RBP10.92□□□□□ -0.66
HCG18-238ENST00000449544 PHF14O94880 888 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 BRINP3Q76B58 766 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 NME9Q86XW9 330 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
HCG18-238ENST00000449544 BICDL1Q6ZP65 573 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 GLI2P10070 1586 aa10.92□□□□□ -0.66
HCG18-238ENST00000449544 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
HCG18-238ENST00000449544 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
HCG18-238ENST00000449544 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
HCG18-238ENST00000449544 TCP11L2Q8N4U5 519 aa10.91□□□□□ -0.66
HCG18-238ENST00000449544 SEPT12Q8IYM1 358 aa10.91□□□□□ -0.66
HCG18-238ENST00000449544 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.91□□□□□ -0.66
HCG18-238ENST00000449544 C11orf95C9JLR9 678 aaPredicted RBP10.9□□□□□ -0.66
HCG18-238ENST00000449544 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
HCG18-238ENST00000449544 PLEKHG1Q9ULL1 1385 aa10.9□□□□□ -0.66
HCG18-238ENST00000449544 SHROOM2Q13796 1616 aa10.9□□□□□ -0.67
HCG18-238ENST00000449544 SULT6B1Q6IMI4 303 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 FAM196AQ6ZSG2 479 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 USHBP1Q8N6Y0 703 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 KDM5DQ9BY66 1539 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 SPATA31A6Q5VVP1 1343 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 IL2RBP14784 551 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 GAS2L2Q8NHY3 880 aa10.89□□□□□ -0.67
HCG18-238ENST00000449544 ABCC1P33527 1531 aa10.88□□□□□ -0.67
HCG18-238ENST00000449544 SAMD9LQ8IVG5 1584 aa10.88□□□□□ -0.67
HCG18-238ENST00000449544 TRIM37O94972 964 aa10.88□□□□□ -0.67
HCG18-238ENST00000449544 UNC5CLQ8IV45 518 aa10.88□□□□□ -0.67
HCG18-238ENST00000449544 ZCRB1Q8TBF4 217 aaKnown RBP10.88□□□□□ -0.67
HCG18-238ENST00000449544 SETD1BQ9UPS6 1966 aaKnown RBP10.88□□□□□ -0.67
HCG18-238ENST00000449544 RFC4P35249 363 aa10.88□□□□□ -0.67
HCG18-238ENST00000449544 NEXNQ0ZGT2 675 aa10.88□□□□□ -0.67
HCG18-238ENST00000449544 SMARCC1Q92922 1105 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms