RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 PRAM1Q96QH2 718 aa19.91■□□□□ 0.78
CTSS-202ENST00000448301 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
CTSS-202ENST00000448301 WAPLQ7Z5K2 1190 aa19.9■□□□□ 0.78
CTSS-202ENST00000448301 CERKQ8TCT0 537 aa19.9■□□□□ 0.78
CTSS-202ENST00000448301 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
CTSS-202ENST00000448301 CDC42BPGQ6DT37 1551 aa19.89■□□□□ 0.77
CTSS-202ENST00000448301 POGKQ9P215 609 aa19.88■□□□□ 0.77
CTSS-202ENST00000448301 MSH6P52701 1360 aa19.88■□□□□ 0.77
CTSS-202ENST00000448301 DCCP43146 1447 aa19.88■□□□□ 0.77
CTSS-202ENST00000448301 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
CTSS-202ENST00000448301 USP47Q96K76 1375 aa19.86■□□□□ 0.77
CTSS-202ENST00000448301 C14orf37Q86TY3 774 aa19.85■□□□□ 0.77
CTSS-202ENST00000448301 FMN2Q9NZ56 1722 aa19.85■□□□□ 0.77
CTSS-202ENST00000448301 C19orf44Q9H6X5 657 aa19.85■□□□□ 0.77
CTSS-202ENST00000448301 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
CTSS-202ENST00000448301 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.76
CTSS-202ENST00000448301 MINK1Q8N4C8 1332 aaPredicted RBP19.8■□□□□ 0.76
CTSS-202ENST00000448301 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
CTSS-202ENST00000448301 TULP4Q9NRJ4 1543 aa19.79■□□□□ 0.76
CTSS-202ENST00000448301 ATF3P18847 181 aa19.78■□□□□ 0.76
CTSS-202ENST00000448301 ST20-MTHFSA0A0A6YYL1 179 aa19.77■□□□□ 0.76
CTSS-202ENST00000448301 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
CTSS-202ENST00000448301 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.76
CTSS-202ENST00000448301 MST1RQ04912 1400 aa19.77■□□□□ 0.75
CTSS-202ENST00000448301 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
CTSS-202ENST00000448301 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
CTSS-202ENST00000448301 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
CTSS-202ENST00000448301 WASLO00401 505 aaPredicted RBP19.75■□□□□ 0.75
CTSS-202ENST00000448301 SLC24A1O60721 1099 aa19.74■□□□□ 0.75
CTSS-202ENST00000448301 TOM1O60784 492 aa19.74■□□□□ 0.75
CTSS-202ENST00000448301 TESK2Q96S53 571 aa19.74■□□□□ 0.75
CTSS-202ENST00000448301 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
CTSS-202ENST00000448301 TOPAZ1Q8N9V7 1692 aa19.73■□□□□ 0.75
CTSS-202ENST00000448301 HSPA5P11021 654 aaKnown RBP19.73■□□□□ 0.75
CTSS-202ENST00000448301 C1orf167Q5SNV9 1468 aa19.72■□□□□ 0.75
CTSS-202ENST00000448301 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
CTSS-202ENST00000448301 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
CTSS-202ENST00000448301 EVC2Q86UK5 1308 aa19.72■□□□□ 0.75
CTSS-202ENST00000448301 ATP7BP35670 1465 aa19.71■□□□□ 0.75
CTSS-202ENST00000448301 KIF1AQ12756 1690 aa19.7■□□□□ 0.74
CTSS-202ENST00000448301 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
CTSS-202ENST00000448301 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
CTSS-202ENST00000448301 SRPK2P78362 688 aaKnown RBP19.67■□□□□ 0.74
CTSS-202ENST00000448301 TMF1P82094 1093 aa19.67■□□□□ 0.74
CTSS-202ENST00000448301 PRR36Q9H6K5 1346 aa19.66■□□□□ 0.74
CTSS-202ENST00000448301 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
CTSS-202ENST00000448301 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
CTSS-202ENST00000448301 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
CTSS-202ENST00000448301 NUDT16Q96DE0 195 aaKnown RBP19.65■□□□□ 0.74
CTSS-202ENST00000448301 PUS7Q96PZ0 661 aaKnown RBP19.65■□□□□ 0.74
CTSS-202ENST00000448301 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
CTSS-202ENST00000448301 ATAD2Q6PL18 1390 aa19.64■□□□□ 0.73
CTSS-202ENST00000448301 PIP4K2BP78356 416 aa19.62■□□□□ 0.73
CTSS-202ENST00000448301 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
CTSS-202ENST00000448301 BRINP3Q76B58 766 aa19.62■□□□□ 0.73
CTSS-202ENST00000448301 ORAI2Q96SN7 254 aa19.62■□□□□ 0.73
CTSS-202ENST00000448301 MYOM1P52179 1685 aa19.61■□□□□ 0.73
CTSS-202ENST00000448301 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
CTSS-202ENST00000448301 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
CTSS-202ENST00000448301 CCDC61Q9Y6R9 512 aa19.61■□□□□ 0.73
CTSS-202ENST00000448301 PPIP5K1Q6PFW1 1433 aa19.61■□□□□ 0.73
CTSS-202ENST00000448301 FBXO41Q8TF61 875 aa19.6■□□□□ 0.73
CTSS-202ENST00000448301 AKAP12Q02952 1782 aa19.6■□□□□ 0.73
CTSS-202ENST00000448301 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
CTSS-202ENST00000448301 PHLPP1O60346 1717 aa19.6■□□□□ 0.73
CTSS-202ENST00000448301 PHF8Q9UPP1 1060 aa19.59■□□□□ 0.73
CTSS-202ENST00000448301 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
CTSS-202ENST00000448301 PLEKHG3A1L390 1219 aa19.56■□□□□ 0.72
CTSS-202ENST00000448301 COL16A1Q07092 1604 aaPredicted RBP19.56■□□□□ 0.72
CTSS-202ENST00000448301 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
CTSS-202ENST00000448301 POLR3AO14802 1390 aaPredicted RBP19.56■□□□□ 0.72
CTSS-202ENST00000448301 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
CTSS-202ENST00000448301 NPHP3Q7Z494 1330 aa19.54■□□□□ 0.72
CTSS-202ENST00000448301 C11orf95C9JLR9 678 aaPredicted RBP19.54■□□□□ 0.72
CTSS-202ENST00000448301 PXDNQ92626 1479 aa19.54■□□□□ 0.72
CTSS-202ENST00000448301 TRPM3Q9HCF6 1732 aaPredicted RBP19.54■□□□□ 0.72
CTSS-202ENST00000448301 CABP1Q9NZU7 370 aa19.53■□□□□ 0.72
CTSS-202ENST00000448301 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
CTSS-202ENST00000448301 NRKQ7Z2Y5 1582 aa19.52■□□□□ 0.72
CTSS-202ENST00000448301 ACEP12821 1306 aa19.52■□□□□ 0.72
CTSS-202ENST00000448301 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
CTSS-202ENST00000448301 FOXO3O43524 673 aa19.51■□□□□ 0.71
CTSS-202ENST00000448301 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
CTSS-202ENST00000448301 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
CTSS-202ENST00000448301 TMC1Q8TDI8 760 aa19.51■□□□□ 0.71
CTSS-202ENST00000448301 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
CTSS-202ENST00000448301 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
CTSS-202ENST00000448301 DDX17Q92841 729 aaKnown RBP19.5■□□□□ 0.71
CTSS-202ENST00000448301 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
CTSS-202ENST00000448301 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
CTSS-202ENST00000448301 POLR3GLQ9BT43 218 aa19.48■□□□□ 0.71
CTSS-202ENST00000448301 USP6P35125 1406 aa19.48■□□□□ 0.71
CTSS-202ENST00000448301 WASHC2AQ641Q2 1341 aa19.48■□□□□ 0.71
CTSS-202ENST00000448301 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
CTSS-202ENST00000448301 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
CTSS-202ENST00000448301 ANKRD36BQ8N2N9 1353 aa19.47■□□□□ 0.71
CTSS-202ENST00000448301 PSME1Q06323 249 aa19.47■□□□□ 0.71
CTSS-202ENST00000448301 KRT28Q7Z3Y7 464 aa19.47■□□□□ 0.71
CTSS-202ENST00000448301 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
CTSS-202ENST00000448301 SHPRHQ149N8 1683 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms