RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 FAM160A2Q8N612 972 aaPredicted RBP6.41□□□□□ -1.38
PTPN12-208ENST00000447995 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
PTPN12-208ENST00000447995 HRCP23327 699 aa6.4□□□□□ -1.38
PTPN12-208ENST00000447995 ATP6V1AP38606 617 aa6.4□□□□□ -1.38
PTPN12-208ENST00000447995 GCGRP47871 477 aa6.4□□□□□ -1.38
PTPN12-208ENST00000447995 FOXC1Q12948 553 aa6.4□□□□□ -1.38
PTPN12-208ENST00000447995 SMYD5Q6GMV2 418 aa6.4□□□□□ -1.38
PTPN12-208ENST00000447995 FMNL1O95466 1100 aaPredicted RBP6.39□□□□□ -1.39
PTPN12-208ENST00000447995 TRIM26Q12899 539 aaPredicted RBP6.39□□□□□ -1.39
PTPN12-208ENST00000447995 MSS51Q4VC12 460 aa6.39□□□□□ -1.39
PTPN12-208ENST00000447995 RNF19BQ6ZMZ0 732 aa6.39□□□□□ -1.39
PTPN12-208ENST00000447995 CRIPAKQ8N1N5 446 aa6.39□□□□□ -1.39
PTPN12-208ENST00000447995 PCGF6Q9BYE7 350 aa6.39□□□□□ -1.39
PTPN12-208ENST00000447995 TOR4AQ9NXH8 423 aa6.39□□□□□ -1.39
PTPN12-208ENST00000447995 AVPP01185 164 aa6.38□□□□□ -1.39
PTPN12-208ENST00000447995 BRICD5Q6PL45 260 aa6.38□□□□□ -1.39
PTPN12-208ENST00000447995 GPIHBP1Q8IV16 184 aa6.38□□□□□ -1.39
PTPN12-208ENST00000447995 SULF1Q8IWU6 871 aa6.38□□□□□ -1.39
PTPN12-208ENST00000447995 SALL2Q9Y467 1007 aaPredicted RBP6.38□□□□□ -1.39
PTPN12-208ENST00000447995 EEA1Q15075 1411 aa6.38□□□□□ -1.39
PTPN12-208ENST00000447995 ATAD2BQ9ULI0 1458 aa6.37□□□□□ -1.39
PTPN12-208ENST00000447995 FAM9AQ8IZU1 332 aaPredicted RBP6.37□□□□□ -1.39
PTPN12-208ENST00000447995 BAZ1BQ9UIG0 1483 aaKnown RBP6.36□□□□□ -1.39
PTPN12-208ENST00000447995 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-208ENST00000447995 DACH1Q9UI36 760 aa6.36□□□□□ -1.39
PTPN12-208ENST00000447995 KDM2AQ9Y2K7 1162 aa6.35□□□□□ -1.39
PTPN12-208ENST00000447995 CD46P15529 392 aa6.34□□□□□ -1.39
PTPN12-208ENST00000447995 CYP4X1Q8N118 509 aa6.34□□□□□ -1.39
PTPN12-208ENST00000447995 ABCC8Q09428 1581 aa6.33□□□□□ -1.4
PTPN12-208ENST00000447995 CD2BP2O95400 341 aaKnown RBP6.33□□□□□ -1.4
PTPN12-208ENST00000447995 SMCPP49901 116 aaPredicted RBP6.33□□□□□ -1.4
PTPN12-208ENST00000447995 MMP16P51512 607 aa6.33□□□□□ -1.4
PTPN12-208ENST00000447995 HAP1P54257 671 aaPredicted RBP6.33□□□□□ -1.4
PTPN12-208ENST00000447995 GMPR2Q9P2T1 348 aaKnown RBP6.33□□□□□ -1.4
PTPN12-208ENST00000447995 WNT7AO00755 349 aa6.32□□□□□ -1.4
PTPN12-208ENST00000447995 AXIN1O15169 862 aa6.32□□□□□ -1.4
PTPN12-208ENST00000447995 MAP2K5Q13163 448 aa6.32□□□□□ -1.4
PTPN12-208ENST00000447995 CTC1Q2NKJ3 1217 aa6.32□□□□□ -1.4
PTPN12-208ENST00000447995 TREML4Q6UXN2 200 aa6.32□□□□□ -1.4
PTPN12-208ENST00000447995 WRNQ14191 1432 aaPredicted RBP eCLIP6.32□□□□□ -1.4
PTPN12-208ENST00000447995 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
PTPN12-208ENST00000447995 TRIM32Q13049 653 aa6.31□□□□□ -1.4
PTPN12-208ENST00000447995 Q3C1V9 767 aa6.31□□□□□ -1.4
PTPN12-208ENST00000447995 GRIPAP1Q4V328 841 aa6.31□□□□□ -1.4
PTPN12-208ENST00000447995 HLA-CQ95604 372 aa6.31□□□□□ -1.4
PTPN12-208ENST00000447995 HMGXB3Q12766 1538 aa6.3□□□□□ -1.4
PTPN12-208ENST00000447995 ZBTB24O43167 697 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-208ENST00000447995 SMPD1P17405 629 aa6.3□□□□□ -1.4
PTPN12-208ENST00000447995 NCAPD3P42695 1498 aa6.29□□□□□ -1.4
PTPN12-208ENST00000447995 TTC24A2A3L6 582 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-208ENST00000447995 ZEB1P37275 1124 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-208ENST00000447995 MRGPRX2Q96LB1 330 aa6.29□□□□□ -1.4
PTPN12-208ENST00000447995 HOXA2O43364 376 aa6.28□□□□□ -1.4
PTPN12-208ENST00000447995 KDM4AO75164 1064 aa6.28□□□□□ -1.4
PTPN12-208ENST00000447995 MDM2Q00987 491 aaPredicted RBP6.28□□□□□ -1.4
PTPN12-208ENST00000447995 SNIP1Q8TAD8 396 aaKnown RBP6.28□□□□□ -1.4
PTPN12-208ENST00000447995 USB1Q9BQ65 265 aaKnown RBP6.28□□□□□ -1.4
PTPN12-208ENST00000447995 TNIKQ9UKE5 1360 aa6.28□□□□□ -1.4
PTPN12-208ENST00000447995 C11orf95C9JLR9 678 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-208ENST00000447995 GOLGA3Q08378 1498 aa6.27□□□□□ -1.41
PTPN12-208ENST00000447995 SOGA1O94964 1423 aa6.26□□□□□ -1.41
PTPN12-208ENST00000447995 J3QL48 77 aa6.26□□□□□ -1.41
PTPN12-208ENST00000447995 USP46P62068 366 aa6.26□□□□□ -1.41
PTPN12-208ENST00000447995 SKOR1P84550 965 aa6.26□□□□□ -1.41
PTPN12-208ENST00000447995 NFX1Q12986 1120 aaKnown RBP6.26□□□□□ -1.41
PTPN12-208ENST00000447995 CCDC102AQ96A19 550 aa6.26□□□□□ -1.41
PTPN12-208ENST00000447995 ATP13A2Q9NQ11 1180 aa6.26□□□□□ -1.41
PTPN12-208ENST00000447995 IRF6O14896 467 aa6.25□□□□□ -1.41
PTPN12-208ENST00000447995 GUCA2AQ02747 115 aa6.25□□□□□ -1.41
PTPN12-208ENST00000447995 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
PTPN12-208ENST00000447995 REPIN1Q9BWE0 567 aaKnown RBP6.25□□□□□ -1.41
PTPN12-208ENST00000447995 CEP164Q9UPV0 1460 aa6.25□□□□□ -1.41
PTPN12-208ENST00000447995 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
PTPN12-208ENST00000447995 SYNJ1O43426 1573 aa6.24□□□□□ -1.41
PTPN12-208ENST00000447995 WFS1O76024 890 aa6.24□□□□□ -1.41
PTPN12-208ENST00000447995 SNRPBP14678 240 aaKnown RBP6.24□□□□□ -1.41
PTPN12-208ENST00000447995 JUNDP17535 347 aa6.24□□□□□ -1.41
PTPN12-208ENST00000447995 HPS1Q92902 700 aa6.24□□□□□ -1.41
PTPN12-208ENST00000447995 KIF21BO75037 1637 aa6.24□□□□□ -1.41
PTPN12-208ENST00000447995 WNT7BP56706 349 aa6.23□□□□□ -1.41
PTPN12-208ENST00000447995 TRIM47Q96LD4 638 aa6.23□□□□□ -1.41
PTPN12-208ENST00000447995 TOP2BQ02880 1626 aa6.23□□□□□ -1.41
PTPN12-208ENST00000447995 MINK1Q8N4C8 1332 aaPredicted RBP6.23□□□□□ -1.41
PTPN12-208ENST00000447995 WIPF1O43516 503 aa6.22□□□□□ -1.41
PTPN12-208ENST00000447995 UBTFP17480 764 aaKnown RBP6.22□□□□□ -1.41
PTPN12-208ENST00000447995 RC3H1Q5TC82 1133 aaKnown RBP6.22□□□□□ -1.41
PTPN12-208ENST00000447995 CCDC24Q8N4L8 307 aa6.22□□□□□ -1.41
PTPN12-208ENST00000447995 GPCPD1Q9NPB8 672 aa6.22□□□□□ -1.41
PTPN12-208ENST00000447995 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
PTPN12-208ENST00000447995 BIVM-ERCC5R4GMW8 1640 aa6.21□□□□□ -1.41
PTPN12-208ENST00000447995 VSIG10Q8N0Z9 540 aa6.21□□□□□ -1.42
PTPN12-208ENST00000447995 SYMPKQ92797 1274 aaKnown RBP6.21□□□□□ -1.42
PTPN12-208ENST00000447995 RUSC2Q8N2Y8 1516 aa6.2□□□□□ -1.42
PTPN12-208ENST00000447995 CLCN1P35523 988 aa6.2□□□□□ -1.42
PTPN12-208ENST00000447995 RETREG3Q86VR2 466 aa6.2□□□□□ -1.42
PTPN12-208ENST00000447995 NUDT12Q9BQG2 462 aa6.2□□□□□ -1.42
PTPN12-208ENST00000447995 SENP2Q9HC62 589 aa6.2□□□□□ -1.42
PTPN12-208ENST00000447995 CFTRP13569 1480 aa6.2□□□□□ -1.42
PTPN12-208ENST00000447995 TULP1O00294 542 aaPredicted RBP6.18□□□□□ -1.42
PTPN12-208ENST00000447995 TERTO14746 1132 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms