RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
TTC39A-212ENST00000447632 CDK19Q9BWU1 502 aa11.87□□□□□ -0.51
TTC39A-212ENST00000447632 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
TTC39A-212ENST00000447632 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
TTC39A-212ENST00000447632 ATF3P18847 181 aa11.85□□□□□ -0.51
TTC39A-212ENST00000447632 FKBP8Q14318 412 aa11.85□□□□□ -0.51
TTC39A-212ENST00000447632 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
TTC39A-212ENST00000447632 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
TTC39A-212ENST00000447632 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
TTC39A-212ENST00000447632 WASLO00401 505 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-212ENST00000447632 PIP4K2BP78356 416 aa11.84□□□□□ -0.51
TTC39A-212ENST00000447632 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-212ENST00000447632 TMF1P82094 1093 aa11.84□□□□□ -0.51
TTC39A-212ENST00000447632 PMFBP1Q8TBY8 1022 aa11.84□□□□□ -0.51
TTC39A-212ENST00000447632 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
TTC39A-212ENST00000447632 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
TTC39A-212ENST00000447632 ESCO1Q5FWF5 840 aa11.82□□□□□ -0.52
TTC39A-212ENST00000447632 CERKQ8TCT0 537 aa11.82□□□□□ -0.52
TTC39A-212ENST00000447632 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
TTC39A-212ENST00000447632 SLC12A5Q9H2X9 1139 aa11.82□□□□□ -0.52
TTC39A-212ENST00000447632 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
TTC39A-212ENST00000447632 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
TTC39A-212ENST00000447632 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
TTC39A-212ENST00000447632 CABP1Q9NZU7 370 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 TECPR2O15040 1411 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 UBAP1LF5GYI3 381 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
TTC39A-212ENST00000447632 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
TTC39A-212ENST00000447632 STRCP1A6NGW2 1772 aa11.8□□□□□ -0.52
TTC39A-212ENST00000447632 MSH6P52701 1360 aa11.8□□□□□ -0.52
TTC39A-212ENST00000447632 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
TTC39A-212ENST00000447632 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
TTC39A-212ENST00000447632 PRR36Q9H6K5 1346 aa11.8□□□□□ -0.52
TTC39A-212ENST00000447632 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 LAMC1P11047 1609 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 KIF7Q2M1P5 1343 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 FOXO3O43524 673 aa11.79□□□□□ -0.52
TTC39A-212ENST00000447632 ANP32CO43423 234 aa11.78□□□□□ -0.52
TTC39A-212ENST00000447632 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
TTC39A-212ENST00000447632 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
TTC39A-212ENST00000447632 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
TTC39A-212ENST00000447632 NGDNQ8NEJ9 315 aaKnown RBP11.77□□□□□ -0.53
TTC39A-212ENST00000447632 LTBP4Q8N2S1 1624 aa11.77□□□□□ -0.53
TTC39A-212ENST00000447632 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
TTC39A-212ENST00000447632 TOM1O60784 492 aa11.76□□□□□ -0.53
TTC39A-212ENST00000447632 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
TTC39A-212ENST00000447632 XRN1Q8IZH2 1706 aaKnown RBP11.76□□□□□ -0.53
TTC39A-212ENST00000447632 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-212ENST00000447632 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
TTC39A-212ENST00000447632 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
TTC39A-212ENST00000447632 CPS1P31327 1500 aa11.75□□□□□ -0.53
TTC39A-212ENST00000447632 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
TTC39A-212ENST00000447632 ARHGEF28Q8N1W1 1705 aaKnown RBP11.74□□□□□ -0.53
TTC39A-212ENST00000447632 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
TTC39A-212ENST00000447632 PANK3Q9H999 370 aa11.74□□□□□ -0.53
TTC39A-212ENST00000447632 PAK3O75914 559 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-212ENST00000447632 PSME1Q06323 249 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 NWD1Q149M9 1564 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 BRINP3Q76B58 766 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
TTC39A-212ENST00000447632 ACEP12821 1306 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 NEFLP07196 543 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
TTC39A-212ENST00000447632 TULP4Q9NRJ4 1543 aa11.72□□□□□ -0.53
TTC39A-212ENST00000447632 SBNO2Q9Y2G9 1366 aa11.72□□□□□ -0.53
TTC39A-212ENST00000447632 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
TTC39A-212ENST00000447632 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
TTC39A-212ENST00000447632 PPIP5K1Q6PFW1 1433 aa11.7□□□□□ -0.54
TTC39A-212ENST00000447632 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
TTC39A-212ENST00000447632 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
TTC39A-212ENST00000447632 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
TTC39A-212ENST00000447632 KRT28Q7Z3Y7 464 aa11.69□□□□□ -0.54
TTC39A-212ENST00000447632 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-212ENST00000447632 MST1RQ04912 1400 aa11.69□□□□□ -0.54
TTC39A-212ENST00000447632 ATAD2Q6PL18 1390 aa11.69□□□□□ -0.54
TTC39A-212ENST00000447632 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
TTC39A-212ENST00000447632 SOX12O15370 315 aa11.68□□□□□ -0.54
TTC39A-212ENST00000447632 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
TTC39A-212ENST00000447632 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
TTC39A-212ENST00000447632 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
TTC39A-212ENST00000447632 KNDC1Q76NI1 1749 aa11.68□□□□□ -0.54
TTC39A-212ENST00000447632 NALCNQ8IZF0 1738 aa11.68□□□□□ -0.54
TTC39A-212ENST00000447632 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
TTC39A-212ENST00000447632 CC2D1BQ5T0F9 858 aaKnown RBP11.67□□□□□ -0.54
TTC39A-212ENST00000447632 ATP7BP35670 1465 aa11.66□□□□□ -0.54
TTC39A-212ENST00000447632 FBLN1P23142 703 aa11.66□□□□□ -0.54
TTC39A-212ENST00000447632 PUS7Q96PZ0 661 aaKnown RBP11.66□□□□□ -0.54
TTC39A-212ENST00000447632 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
TTC39A-212ENST00000447632 KTN1Q86UP2 1357 aaKnown RBP11.66□□□□□ -0.54
TTC39A-212ENST00000447632 NME9Q86XW9 330 aa11.66□□□□□ -0.54
TTC39A-212ENST00000447632 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
TTC39A-212ENST00000447632 KNSTRNQ9Y448 316 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms