RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 HELBQ8NG08 1087 aaPredicted RBP10.76□□□□□ -0.69
COL11A1-205ENST00000447608 USTQ9Y2C2 406 aa10.76□□□□□ -0.69
COL11A1-205ENST00000447608 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
COL11A1-205ENST00000447608 BRD1O95696 1058 aa10.75□□□□□ -0.69
COL11A1-205ENST00000447608 POTEJP0CG39 1038 aa10.75□□□□□ -0.69
COL11A1-205ENST00000447608 KCNA1Q09470 495 aa10.75□□□□□ -0.69
COL11A1-205ENST00000447608 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
COL11A1-205ENST00000447608 EPS8L1Q8TE68 723 aa10.75□□□□□ -0.69
COL11A1-205ENST00000447608 FOXD4L4Q8WXT5 416 aaPredicted RBP10.75□□□□□ -0.69
COL11A1-205ENST00000447608 KIAA1468Q9P260 1216 aa10.75□□□□□ -0.69
COL11A1-205ENST00000447608 PALM3A6NDB9 673 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-205ENST00000447608 CFAP99D6REC4 459 aa10.74□□□□□ -0.69
COL11A1-205ENST00000447608 SWT1Q5T5J6 900 aaKnown RBP10.74□□□□□ -0.69
COL11A1-205ENST00000447608 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
COL11A1-205ENST00000447608 KCNK17Q96T54 332 aa10.73□□□□□ -0.69
COL11A1-205ENST00000447608 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
COL11A1-205ENST00000447608 C6orf229H3BNL8 230 aa10.71□□□□□ -0.69
COL11A1-205ENST00000447608 UCN2Q96RP3 112 aa10.71□□□□□ -0.69
COL11A1-205ENST00000447608 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
COL11A1-205ENST00000447608 PRR7Q8TB68 274 aa10.7□□□□□ -0.7
COL11A1-205ENST00000447608 ZNF428Q96B54 188 aa10.69□□□□□ -0.7
COL11A1-205ENST00000447608 FUT2Q10981 343 aa10.68□□□□□ -0.7
COL11A1-205ENST00000447608 ZBED2Q9BTP6 218 aa10.68□□□□□ -0.7
COL11A1-205ENST00000447608 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
COL11A1-205ENST00000447608 NR6A1Q15406 480 aa10.67□□□□□ -0.7
COL11A1-205ENST00000447608 SYMPKQ92797 1274 aaKnown RBP10.67□□□□□ -0.7
COL11A1-205ENST00000447608 SOX11P35716 441 aa10.66□□□□□ -0.7
COL11A1-205ENST00000447608 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
COL11A1-205ENST00000447608 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
COL11A1-205ENST00000447608 ATG7O95352 703 aa10.65□□□□□ -0.7
COL11A1-205ENST00000447608 SEMA3FQ13275 785 aa10.65□□□□□ -0.7
COL11A1-205ENST00000447608 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
COL11A1-205ENST00000447608 VRTNQ9H8Y1 702 aa10.65□□□□□ -0.7
COL11A1-205ENST00000447608 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-205ENST00000447608 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-205ENST00000447608 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
COL11A1-205ENST00000447608 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
COL11A1-205ENST00000447608 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
COL11A1-205ENST00000447608 MAFBQ9Y5Q3 323 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-205ENST00000447608 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
COL11A1-205ENST00000447608 TMEM88BA6NKF7 163 aa10.63□□□□□ -0.71
COL11A1-205ENST00000447608 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
COL11A1-205ENST00000447608 PSEN2P49810 448 aa10.63□□□□□ -0.71
COL11A1-205ENST00000447608 CFHP08603 1231 aa10.62□□□□□ -0.71
COL11A1-205ENST00000447608 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
COL11A1-205ENST00000447608 PNMA1Q8ND90 353 aa10.61□□□□□ -0.71
COL11A1-205ENST00000447608 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
COL11A1-205ENST00000447608 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
COL11A1-205ENST00000447608 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL11A1-205ENST00000447608 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
COL11A1-205ENST00000447608 ATP9BO43861 1147 aa10.58□□□□□ -0.72
COL11A1-205ENST00000447608 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
COL11A1-205ENST00000447608 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
COL11A1-205ENST00000447608 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
COL11A1-205ENST00000447608 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
COL11A1-205ENST00000447608 RNF40O75150 1001 aa10.56□□□□□ -0.72
COL11A1-205ENST00000447608 SND1Q7KZF4 910 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL11A1-205ENST00000447608 RETREG3Q86VR2 466 aa10.56□□□□□ -0.72
COL11A1-205ENST00000447608 NR1H3Q13133 447 aa10.55□□□□□ -0.72
COL11A1-205ENST00000447608 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
COL11A1-205ENST00000447608 SNPHO15079 494 aa10.54□□□□□ -0.72
COL11A1-205ENST00000447608 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
COL11A1-205ENST00000447608 SLC4A5Q9BY07 1137 aa10.54□□□□□ -0.72
COL11A1-205ENST00000447608 PIK3CDO00329 1044 aa10.53□□□□□ -0.72
COL11A1-205ENST00000447608 ARHGAP33O14559 1287 aa10.53□□□□□ -0.72
COL11A1-205ENST00000447608 PUS10Q3MIT2 529 aaKnown RBP10.53□□□□□ -0.72
COL11A1-205ENST00000447608 MORN1Q5T089 497 aa10.53□□□□□ -0.72
COL11A1-205ENST00000447608 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
COL11A1-205ENST00000447608 DESI1Q6ICB0 168 aa10.53□□□□□ -0.72
COL11A1-205ENST00000447608 SLC27A5Q9Y2P5 690 aa10.53□□□□□ -0.72
COL11A1-205ENST00000447608 E9PSI1 815 aa10.52□□□□□ -0.73
COL11A1-205ENST00000447608 FBXO45P0C2W1 286 aa10.52□□□□□ -0.73
COL11A1-205ENST00000447608 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
COL11A1-205ENST00000447608 LYPD8Q6UX82 237 aa10.52□□□□□ -0.73
COL11A1-205ENST00000447608 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
COL11A1-205ENST00000447608 ZMIZ1Q9ULJ6 1067 aa10.51□□□□□ -0.73
COL11A1-205ENST00000447608 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
COL11A1-205ENST00000447608 ELOAQ14241 798 aaKnown RBP10.5□□□□□ -0.73
COL11A1-205ENST00000447608 Q3C1V9 767 aa10.5□□□□□ -0.73
COL11A1-205ENST00000447608 TMEM164Q5U3C3 297 aa10.5□□□□□ -0.73
COL11A1-205ENST00000447608 STK32AQ8WU08 396 aa10.5□□□□□ -0.73
COL11A1-205ENST00000447608 GNEQ9Y223 722 aaKnown RBP10.5□□□□□ -0.73
COL11A1-205ENST00000447608 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
COL11A1-205ENST00000447608 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
COL11A1-205ENST00000447608 SKIP12755 728 aa10.48□□□□□ -0.73
COL11A1-205ENST00000447608 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
COL11A1-205ENST00000447608 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
COL11A1-205ENST00000447608 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
COL11A1-205ENST00000447608 USP17L3A6NCW0 530 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 USP17L4A6NCW7 530 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
COL11A1-205ENST00000447608 USP17L2Q6R6M4 530 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 USP17L1Q7RTZ2 530 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 NFATC2IPQ8NCF5 419 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 FKBPLQ9UIM3 349 aa10.47□□□□□ -0.73
COL11A1-205ENST00000447608 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.73
COL11A1-205ENST00000447608 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
COL11A1-205ENST00000447608 DEPDC4Q8N2C3 294 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms