RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 TMCO5BA8MYB1 307 aa3.53□□□□□ -1.84
CHD9-203ENST00000447540 CCDC172P0C7W6 258 aa3.53□□□□□ -1.84
CHD9-203ENST00000447540 KLHL40Q2TBA0 621 aa3.53□□□□□ -1.84
CHD9-203ENST00000447540 NBPF11Q86T75 865 aa3.53□□□□□ -1.84
CHD9-203ENST00000447540 MIPOL1Q8TD10 442 aa3.53□□□□□ -1.84
CHD9-203ENST00000447540 ANKRD20A12PQ8NF67 263 aa3.53□□□□□ -1.85
CHD9-203ENST00000447540 PPM1EQ8WY54 764 aa3.53□□□□□ -1.85
CHD9-203ENST00000447540 RRAGDQ9NQL2 400 aaPredicted RBP3.53□□□□□ -1.85
CHD9-203ENST00000447540 DDX49Q9Y6V7 483 aaKnown RBP3.53□□□□□ -1.85
CHD9-203ENST00000447540 ATP8B1O43520 1251 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 PRPF40AO75400 957 aaKnown RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 JAKMIP3Q5VZ66 844 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 ICE2Q659A1 982 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 A0A1B0GUL7 405 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 GOLIM4O00461 696 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 CHMP4CQ96CF2 233 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 BRD4O60885 1362 aaPredicted RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 FAM50AQ14320 339 aaKnown RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 GOLGA6L9A6NEM1 432 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 RBBP5Q15291 538 aaKnown RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 ZHX1Q9UKY1 873 aaPredicted RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 MYO6Q9UM54 1294 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 CHMP3Q9Y3E7 222 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 IPO7O95373 1038 aaKnown RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 OS9Q13438 667 aaPredicted RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 CCDC112Q8NEF3 446 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 SRRTQ9BXP5 876 aaKnown RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 GOLGA6L19H0YKK7 550 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 GIMAP7Q8NHV1 300 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 GBP3Q9H0R5 595 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 IRX6P78412 446 aaPredicted RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 TMED1Q13445 227 aa3.52□□□□□ -1.85
CHD9-203ENST00000447540 CPSF2Q9P2I0 782 aaKnown RBP3.52□□□□□ -1.85
CHD9-203ENST00000447540 PPP1R12AO14974 1030 aaPredicted RBP3.51□□□□□ -1.85
CHD9-203ENST00000447540 USP25Q9UHP3 1055 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 MAP3K1Q13233 1512 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 ITGB1BP2Q9UKP3 347 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 ANAPC15P60006 121 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 IRX1P78414 480 aaPredicted RBP3.51□□□□□ -1.85
CHD9-203ENST00000447540 STK11IPQ8N1F8 1099 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 STK31Q9BXU1 1019 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 PDE3AQ14432 1141 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 ZKSCAN8Q15776 578 aaPredicted RBP3.51□□□□□ -1.85
CHD9-203ENST00000447540 CCDC7Q96M83 1385 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 ZNF445P59923 1031 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 LUZP1Q86V48 1076 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 MED4Q9NPJ6 270 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 INCENPQ9NQS7 918 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 MAFGO15525 162 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 FILIP1Q7Z7B0 1213 aa3.51□□□□□ -1.85
CHD9-203ENST00000447540 SECISBP2LQ93073 1101 aaKnown RBP3.51□□□□□ -1.85
CHD9-203ENST00000447540 GTF2F1P35269 517 aaKnown RBP eCLIP3.5□□□□□ -1.85
CHD9-203ENST00000447540 PEX19P40855 299 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 CCDC38Q502W7 563 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 SPATS2Q86XZ4 545 aaKnown RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 CCDC50Q8IVM0 306 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 CNPY4Q8N129 248 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 ANAPC4Q9UJX5 808 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 ELP1O95163 1332 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 CASQ1P31415 396 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 LRCH2Q5VUJ6 765 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 ST18O60284 1047 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 PDCD2Q16342 344 aaPredicted RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 RMDN2Q96LZ7 410 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 REC8O95072 547 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 PPFIA3O75145 1194 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 BAG4O95429 457 aaKnown RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 MUM1L1Q5H9M0 696 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 CAGE1Q8TC20 777 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 DNAAF4Q8WXU2 420 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 FEZ2Q9UHY8 353 aaPredicted RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 HMMRO75330 724 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 LMNB2Q03252 620 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 DONSONQ9NYP3 566 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 SWAP70Q9UH65 585 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 PLEKHH1Q9ULM0 1364 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 POLA1P09884 1462 aaPredicted RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 MCM3P25205 808 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 SLFNL1Q499Z3 407 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 DNAJC21Q5F1R6 531 aaKnown RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 DHX37Q8IY37 1157 aaKnown RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 POTEB2H3BUK9 544 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 ZSCAN20P17040 1043 aaPredicted RBP3.5□□□□□ -1.85
CHD9-203ENST00000447540 MAP2K2P36507 400 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 ERC1Q8IUD2 1116 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 KIF21BO75037 1637 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 MIA2Q96PC5 1412 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 KIF15Q9NS87 1388 aa3.5□□□□□ -1.85
CHD9-203ENST00000447540 HSP90AB4PQ58FF6 505 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 AP1ARQ63HQ0 302 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 NBPF7P0C2Y1 421 aaPredicted RBP3.49□□□□□ -1.85
CHD9-203ENST00000447540 CDR1P51861 262 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 APLFQ8IW19 511 aaPredicted RBP3.49□□□□□ -1.85
CHD9-203ENST00000447540 SNX21Q969T3 373 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 CTAGE5O15320 804 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 TTC31Q49AM3 519 aaPredicted RBP3.49□□□□□ -1.85
CHD9-203ENST00000447540 POGKQ9P215 609 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 CCDC191Q8NCU4 936 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 NCAPD3P42695 1498 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 WDR43Q15061 677 aaKnown RBP eCLIP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms