RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 RALGAPBQ86X10 1494 aa7.96□□□□□ -1.13
PROM1-201ENST00000447510 HAP1P54257 671 aaPredicted RBP7.96□□□□□ -1.13
PROM1-201ENST00000447510 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.13
PROM1-201ENST00000447510 PIP4K2BP78356 416 aa7.96□□□□□ -1.14
PROM1-201ENST00000447510 TERF2IPQ9NYB0 399 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 NOP58Q9Y2X3 529 aaKnown RBP7.95□□□□□ -1.14
PROM1-201ENST00000447510 NEXMIFQ5QGS0 1516 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 FANCIQ9NVI1 1328 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 ZBTB7CA1YPR0 619 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 PMFBP1Q8TBY8 1022 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 MSH6P52701 1360 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 ANP32CO43423 234 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 C19orf44Q9H6X5 657 aa7.95□□□□□ -1.14
PROM1-201ENST00000447510 ABCC11Q96J66 1382 aa7.94□□□□□ -1.14
PROM1-201ENST00000447510 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
PROM1-201ENST00000447510 PSME1Q06323 249 aa7.94□□□□□ -1.14
PROM1-201ENST00000447510 CADPS2Q86UW7 1296 aa7.94□□□□□ -1.14
PROM1-201ENST00000447510 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
PROM1-201ENST00000447510 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
PROM1-201ENST00000447510 NUDT16Q96DE0 195 aaKnown RBP7.94□□□□□ -1.14
PROM1-201ENST00000447510 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
PROM1-201ENST00000447510 UBAP1LF5GYI3 381 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 UBR1Q8IWV7 1749 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 SLIT1O75093 1534 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 ARHGAP23Q9P227 1491 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 TMEM94Q12767 1356 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 PIK3R4Q99570 1358 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 SOX12O15370 315 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.93□□□□□ -1.14
PROM1-201ENST00000447510 CABP1Q9NZU7 370 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 ALKQ9UM73 1620 aa7.93□□□□□ -1.14
PROM1-201ENST00000447510 ADAMTS13Q76LX8 1427 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 SLC12A5Q9H2X9 1139 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 CCDC61Q9Y6R9 512 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 PLEKHH1Q9ULM0 1364 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 TOM1O60784 492 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 ROBO2Q9HCK4 1378 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 KIF7Q2M1P5 1343 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 PANK3Q9H999 370 aa7.92□□□□□ -1.14
PROM1-201ENST00000447510 MYO5BQ9ULV0 1848 aa7.91□□□□□ -1.14
PROM1-201ENST00000447510 CC2D1BQ5T0F9 858 aaKnown RBP7.91□□□□□ -1.14
PROM1-201ENST00000447510 GPRASP1Q5JY77 1395 aa7.91□□□□□ -1.14
PROM1-201ENST00000447510 ANP32AP39687 249 aaKnown RBP7.91□□□□□ -1.14
PROM1-201ENST00000447510 TNNT2P45379 298 aaPredicted RBP7.91□□□□□ -1.14
PROM1-201ENST00000447510 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
PROM1-201ENST00000447510 XPCQ01831 940 aaPredicted RBP7.91□□□□□ -1.14
PROM1-201ENST00000447510 ERICH6BQ5W0A0 696 aa7.91□□□□□ -1.14
PROM1-201ENST00000447510 FOXO3O43524 673 aa7.9□□□□□ -1.14
PROM1-201ENST00000447510 ZBTB47Q9UFB7 747 aaPredicted RBP7.9□□□□□ -1.14
PROM1-201ENST00000447510 PHF8Q9UPP1 1060 aa7.9□□□□□ -1.14
PROM1-201ENST00000447510 ATAD2Q6PL18 1390 aa7.9□□□□□ -1.14
PROM1-201ENST00000447510 PPM1GO15355 546 aaPredicted RBP7.9□□□□□ -1.15
PROM1-201ENST00000447510 CCDC7Q96M83 1385 aa7.9□□□□□ -1.15
PROM1-201ENST00000447510 LAS1LQ9Y4W2 734 aaKnown RBP7.89□□□□□ -1.15
PROM1-201ENST00000447510 WASHC2AQ641Q2 1341 aa7.89□□□□□ -1.15
PROM1-201ENST00000447510 NEURL4Q96JN8 1562 aa7.89□□□□□ -1.15
PROM1-201ENST00000447510 UBE2Q2Q8WVN8 375 aa7.89□□□□□ -1.15
PROM1-201ENST00000447510 TESK2Q96S53 571 aa7.89□□□□□ -1.15
PROM1-201ENST00000447510 PPLO60437 1756 aa7.89□□□□□ -1.15
PROM1-201ENST00000447510 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
PROM1-201ENST00000447510 NUTM2GQ5VZR2 741 aa7.88□□□□□ -1.15
PROM1-201ENST00000447510 MORC1Q86VD1 984 aa7.88□□□□□ -1.15
PROM1-201ENST00000447510 DISP3Q9P2K9 1392 aa7.88□□□□□ -1.15
PROM1-201ENST00000447510 SLAIN2Q9P270 581 aa7.88□□□□□ -1.15
PROM1-201ENST00000447510 NRXN1Q9ULB1 1477 aa7.88□□□□□ -1.15
PROM1-201ENST00000447510 ZNF692Q9BU19 519 aaPredicted RBP7.87□□□□□ -1.15
PROM1-201ENST00000447510 PTPRUQ92729 1446 aa7.87□□□□□ -1.15
PROM1-201ENST00000447510 ORAI2Q96SN7 254 aa7.87□□□□□ -1.15
PROM1-201ENST00000447510 FAM135BQ49AJ0 1406 aa7.87□□□□□ -1.15
PROM1-201ENST00000447510 SETBP1Q9Y6X0 1596 aa7.87□□□□□ -1.15
PROM1-201ENST00000447510 ABTB2Q8N961 1025 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 MED14O60244 1454 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 NLRP6P59044 892 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 ACEP12821 1306 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 CGNL1Q0VF96 1302 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 IQGAP1P46940 1657 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 KRT28Q7Z3Y7 464 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 CERKQ8TCT0 537 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 COG3Q96JB2 828 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 KTN1Q86UP2 1357 aaKnown RBP7.86□□□□□ -1.15
PROM1-201ENST00000447510 TRPM1Q7Z4N2 1603 aa7.86□□□□□ -1.15
PROM1-201ENST00000447510 ZNF142P52746 1687 aaPredicted RBP7.86□□□□□ -1.15
PROM1-201ENST00000447510 LAMC1P11047 1609 aa7.85□□□□□ -1.15
PROM1-201ENST00000447510 KDM5AP29375 1690 aaKnown RBP7.85□□□□□ -1.15
PROM1-201ENST00000447510 GGNBP2Q9H3C7 697 aa7.85□□□□□ -1.15
PROM1-201ENST00000447510 DIP2AQ14689 1571 aa7.85□□□□□ -1.15
PROM1-201ENST00000447510 PPIP5K1Q6PFW1 1433 aa7.85□□□□□ -1.15
PROM1-201ENST00000447510 NEFMP07197 916 aa7.85□□□□□ -1.15
PROM1-201ENST00000447510 NPHP3Q7Z494 1330 aa7.84□□□□□ -1.15
PROM1-201ENST00000447510 PKNOX2Q96KN3 472 aa7.84□□□□□ -1.15
PROM1-201ENST00000447510 PTCH1Q13635 1447 aa7.84□□□□□ -1.15
PROM1-201ENST00000447510 SENP3-EIF4A1A0A087X0R7 540 aa7.84□□□□□ -1.15
PROM1-201ENST00000447510 ADGRL3Q9HAR2 1447 aa7.84□□□□□ -1.15
PROM1-201ENST00000447510 DDX17Q92841 729 aaKnown RBP7.84□□□□□ -1.16
PROM1-201ENST00000447510 PUS7Q96PZ0 661 aaKnown RBP7.83□□□□□ -1.16
PROM1-201ENST00000447510 NUTM2BA6NNL0 878 aaPredicted RBP7.83□□□□□ -1.16
PROM1-201ENST00000447510 NUTM2EB1AL46 878 aaPredicted RBP7.83□□□□□ -1.16
PROM1-201ENST00000447510 NUTM2AQ8IVF1 878 aaPredicted RBP7.83□□□□□ -1.16
PROM1-201ENST00000447510 CFAP53Q96M91 514 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms