RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-205ENST00000447267 FRMPD1Q5SYB0 1578 aa9.32□□□□□ -0.92
SDCBP-205ENST00000447267 AKNAQ7Z591 1439 aa9.31□□□□□ -0.92
SDCBP-205ENST00000447267 SIGLEC1Q9BZZ2 1709 aa9.31□□□□□ -0.92
SDCBP-205ENST00000447267 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
SDCBP-205ENST00000447267 ZFRQ96KR1 1074 aaKnown RBP9.3□□□□□ -0.92
SDCBP-205ENST00000447267 NPDC1Q9NQX5 325 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-205ENST00000447267 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
SDCBP-205ENST00000447267 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
SDCBP-205ENST00000447267 ARHGEF40Q8TER5 1519 aa9.29□□□□□ -0.92
SDCBP-205ENST00000447267 SMAPO00193 183 aa9.28□□□□□ -0.92
SDCBP-205ENST00000447267 ARHGEF1Q92888 912 aaKnown RBP9.28□□□□□ -0.92
SDCBP-205ENST00000447267 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
SDCBP-205ENST00000447267 PRSS12P56730 875 aa9.27□□□□□ -0.93
SDCBP-205ENST00000447267 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
SDCBP-205ENST00000447267 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
SDCBP-205ENST00000447267 FER1L4A9Z1Z3 1794 aa9.27□□□□□ -0.93
SDCBP-205ENST00000447267 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
SDCBP-205ENST00000447267 FAM98CQ17RN3 349 aaKnown RBP9.26□□□□□ -0.93
SDCBP-205ENST00000447267 ARHGEF12Q9NZN5 1544 aa9.26□□□□□ -0.93
SDCBP-205ENST00000447267 CAMSAP1Q5T5Y3 1602 aa9.25□□□□□ -0.93
SDCBP-205ENST00000447267 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SDCBP-205ENST00000447267 DENND4BO75064 1496 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-205ENST00000447267 NEO1Q92859 1461 aa9.24□□□□□ -0.93
SDCBP-205ENST00000447267 TTC13Q8NBP0 860 aa9.24□□□□□ -0.93
SDCBP-205ENST00000447267 WBP1LQ9NX94 342 aa9.24□□□□□ -0.93
SDCBP-205ENST00000447267 IGF1RP08069 1367 aa9.24□□□□□ -0.93
SDCBP-205ENST00000447267 KIAA0556O60303 1618 aa9.23□□□□□ -0.93
SDCBP-205ENST00000447267 PTPRKQ15262 1439 aa9.23□□□□□ -0.93
SDCBP-205ENST00000447267 TRAPPC8Q9Y2L5 1435 aa9.23□□□□□ -0.93
SDCBP-205ENST00000447267 SETBP1Q9Y6X0 1596 aa9.22□□□□□ -0.93
SDCBP-205ENST00000447267 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
SDCBP-205ENST00000447267 FHOD3Q2V2M9 1422 aa9.21□□□□□ -0.94
SDCBP-205ENST00000447267 PADI6Q6TGC4 694 aa9.2□□□□□ -0.94
SDCBP-205ENST00000447267 TATDN2Q93075 761 aa9.2□□□□□ -0.94
SDCBP-205ENST00000447267 ZFYVE16Q7Z3T8 1539 aa9.2□□□□□ -0.94
SDCBP-205ENST00000447267 SETD1BQ9UPS6 1966 aaKnown RBP9.19□□□□□ -0.94
SDCBP-205ENST00000447267 SEMA3EO15041 775 aa9.19□□□□□ -0.94
SDCBP-205ENST00000447267 HPS5Q9UPZ3 1129 aa9.19□□□□□ -0.94
SDCBP-205ENST00000447267 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
SDCBP-205ENST00000447267 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.18□□□□□ -0.94
SDCBP-205ENST00000447267 PNMA3Q9UL41 463 aa9.18□□□□□ -0.94
SDCBP-205ENST00000447267 SHANK2Q9UPX8 1470 aa9.17□□□□□ -0.94
SDCBP-205ENST00000447267 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-205ENST00000447267 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
SDCBP-205ENST00000447267 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
SDCBP-205ENST00000447267 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
SDCBP-205ENST00000447267 RBM27Q9P2N5 1060 aaKnown RBP9.17□□□□□ -0.94
SDCBP-205ENST00000447267 YY1P25490 414 aa9.16□□□□□ -0.94
SDCBP-205ENST00000447267 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
SDCBP-205ENST00000447267 KDM2AQ9Y2K7 1162 aa9.16□□□□□ -0.94
SDCBP-205ENST00000447267 ATP10AO60312 1499 aa9.15□□□□□ -0.94
SDCBP-205ENST00000447267 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
SDCBP-205ENST00000447267 RXRBP28702 533 aa9.15□□□□□ -0.94
SDCBP-205ENST00000447267 PTGDRQ13258 359 aa9.15□□□□□ -0.94
SDCBP-205ENST00000447267 SENP3-EIF4A1A0A087X0R7 540 aa9.14□□□□□ -0.95
SDCBP-205ENST00000447267 A0A0G2JS52 829 aa9.14□□□□□ -0.95
SDCBP-205ENST00000447267 CPS1P31327 1500 aa9.14□□□□□ -0.95
SDCBP-205ENST00000447267 CARMIL1Q5VZK9 1371 aa9.13□□□□□ -0.95
SDCBP-205ENST00000447267 EYA1Q99502 592 aa9.13□□□□□ -0.95
SDCBP-205ENST00000447267 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
SDCBP-205ENST00000447267 IQGAP2Q13576 1575 aa9.12□□□□□ -0.95
SDCBP-205ENST00000447267 NUTM2BA6NNL0 878 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-205ENST00000447267 NUTM2EB1AL46 878 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-205ENST00000447267 NUTM2DQ5VT03 806 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-205ENST00000447267 NUTM2AQ8IVF1 878 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-205ENST00000447267 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
SDCBP-205ENST00000447267 TCOF1Q13428 1488 aaKnown RBP9.12□□□□□ -0.95
SDCBP-205ENST00000447267 C9orf84Q5VXU9 1444 aa9.12□□□□□ -0.95
SDCBP-205ENST00000447267 ABCA9Q8IUA7 1624 aa9.12□□□□□ -0.95
SDCBP-205ENST00000447267 ATP10BO94823 1461 aa9.11□□□□□ -0.95
SDCBP-205ENST00000447267 RAPGEF2Q9Y4G8 1499 aa9.11□□□□□ -0.95
SDCBP-205ENST00000447267 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
SDCBP-205ENST00000447267 RICTORQ6R327 1708 aa9.11□□□□□ -0.95
SDCBP-205ENST00000447267 MAGI2Q86UL8 1455 aa9.1□□□□□ -0.95
SDCBP-205ENST00000447267 HECW1Q76N89 1606 aa9.1□□□□□ -0.95
SDCBP-205ENST00000447267 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-205ENST00000447267 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-205ENST00000447267 ZNF772Q68DY9 489 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-205ENST00000447267 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
SDCBP-205ENST00000447267 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
SDCBP-205ENST00000447267 SWT1Q5T5J6 900 aaKnown RBP9.09□□□□□ -0.95
SDCBP-205ENST00000447267 C3P01024 1663 aa9.09□□□□□ -0.95
SDCBP-205ENST00000447267 ZMYM4Q5VZL5 1548 aa9.09□□□□□ -0.95
SDCBP-205ENST00000447267 PLA2R1Q13018 1463 aa9.08□□□□□ -0.96
SDCBP-205ENST00000447267 ABCA8O94911 1581 aa9.08□□□□□ -0.96
SDCBP-205ENST00000447267 APLP1P51693 650 aa9.08□□□□□ -0.96
SDCBP-205ENST00000447267 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
SDCBP-205ENST00000447267 RBM26Q5T8P6 1007 aaKnown RBP9.08□□□□□ -0.96
SDCBP-205ENST00000447267 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
SDCBP-205ENST00000447267 SCAPERQ9BY12 1400 aa9.07□□□□□ -0.96
SDCBP-205ENST00000447267 BIVM-ERCC5R4GMW8 1640 aa9.07□□□□□ -0.96
SDCBP-205ENST00000447267 NUTM2FA1L443 756 aa9.07□□□□□ -0.96
SDCBP-205ENST00000447267 GPR37O15354 613 aa9.07□□□□□ -0.96
SDCBP-205ENST00000447267 PPP4CP60510 307 aa9.07□□□□□ -0.96
SDCBP-205ENST00000447267 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
SDCBP-205ENST00000447267 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
SDCBP-205ENST00000447267 ZMYM3Q14202 1370 aa9.05□□□□□ -0.96
SDCBP-205ENST00000447267 RNF40O75150 1001 aa9.04□□□□□ -0.96
SDCBP-205ENST00000447267 FECHP22830 423 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms