RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PNMA2Q9UL42 364 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 SALL2Q9Y467 1007 aaPredicted RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 MINK1Q8N4C8 1332 aaPredicted RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 BICDL2A1A5D9 508 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 EPB41L2O43491 1005 aaKnown RBP3.57□□□□□ -1.84
UBBP3-201ENST00000445497 ZNF500O60304 480 aaPredicted RBP3.57□□□□□ -1.84
UBBP3-201ENST00000445497 MARSP56192 900 aaKnown RBP3.57□□□□□ -1.84
UBBP3-201ENST00000445497 BIRC2Q13490 618 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 CSPP1Q1MSJ5 1256 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 TBC1D10BQ4KMP7 808 aaPredicted RBP3.57□□□□□ -1.84
UBBP3-201ENST00000445497 EGFLAMQ63HQ2 1017 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 SDE2Q6IQ49 451 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 DNAJC14Q6Y2X3 702 aaPredicted RBP3.57□□□□□ -1.84
UBBP3-201ENST00000445497 MAMSTRQ6ZN01 415 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 PARP9Q8IXQ6 854 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 CCDC146Q8IYE0 955 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 BANK1Q8NDB2 785 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 GIPC2Q8TF65 315 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 CEP126Q9P2H0 1117 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 FBXO9Q9UK97 447 aaPredicted RBP3.57□□□□□ -1.84
UBBP3-201ENST00000445497 SBNO2Q9Y2G9 1366 aa3.57□□□□□ -1.84
UBBP3-201ENST00000445497 STK10O94804 968 aaKnown RBP3.56□□□□□ -1.84
UBBP3-201ENST00000445497 APPP05067 770 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 HSP90AB1P08238 724 aaKnown RBP3.56□□□□□ -1.84
UBBP3-201ENST00000445497 VDRP11473 427 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 SSFA2P28290 1259 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 DSG3P32926 999 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 NBPF9Q3BBW0 867 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 GJC2Q5T442 439 aaPredicted RBP3.56□□□□□ -1.84
UBBP3-201ENST00000445497 OTUD6BQ8N6M0 293 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 GLMNQ92990 594 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 CHMP4BQ9H444 224 aaKnown RBP3.56□□□□□ -1.84
UBBP3-201ENST00000445497 ARHGEF10LQ9HCE6 1279 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 ABCF2Q9UG63 623 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 TPX2Q9ULW0 747 aaKnown RBP3.56□□□□□ -1.84
UBBP3-201ENST00000445497 SCINQ9Y6U3 715 aa3.56□□□□□ -1.84
UBBP3-201ENST00000445497 HOXA2O43364 376 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 CBFA2T2O43439 604 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 ERCC5P28715 1186 aaPredicted RBP3.55□□□□□ -1.84
UBBP3-201ENST00000445497 POU5F1BQ06416 359 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 MAP2K5Q13163 448 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 SOGA3Q5TF21 947 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 ZKSCAN2Q63HK3 967 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 ICE2Q659A1 982 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 CCDC174Q6PII3 467 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 NPAS4Q8IUM7 802 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.55□□□□□ -1.84
UBBP3-201ENST00000445497 RELTQ969Z4 430 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 EVI5LQ96CN4 794 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 GPATCH3Q96I76 525 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 SPACA7Q96KW9 195 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 TBC1D2Q9BYX2 928 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 TANGO6Q9C0B7 1094 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 LNPKQ9C0E8 428 aa3.55□□□□□ -1.84
UBBP3-201ENST00000445497 RPGRIP1LQ68CZ1 1315 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 PRC1O43663 620 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 S100BP04271 92 aaPredicted RBP3.54□□□□□ -1.84
UBBP3-201ENST00000445497 BDNFP23560 247 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 PEX19P40855 299 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 GYS2P54840 703 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 RHBDL3P58872 404 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 SAFB2Q14151 953 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBBP3-201ENST00000445497 TTLL12Q14166 644 aaPredicted RBP3.54□□□□□ -1.84
UBBP3-201ENST00000445497 L1TD1Q5T7N2 865 aaKnown RBP3.54□□□□□ -1.84
UBBP3-201ENST00000445497 CCSAPQ6IQ19 270 aaPredicted RBP3.54□□□□□ -1.84
UBBP3-201ENST00000445497 C11orf96Q7Z7L8 435 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 PDILTQ8N807 584 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 LSM14AQ8ND56 463 aaKnown RBP3.54□□□□□ -1.84
UBBP3-201ENST00000445497 CEP63Q96MT8 703 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 NLRP2Q9NX02 1062 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 ANAPC4Q9UJX5 808 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 HDAC5Q9UQL6 1122 aa3.54□□□□□ -1.84
UBBP3-201ENST00000445497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 CFAP69A5D8W1 941 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 SOCS7O14512 581 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 TCERG1O14776 1098 aaKnown RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 DHX16O60231 1041 aaKnown RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 ITGAEP38570 1179 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 SSR1P43307 286 aaKnown RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 TBX4P57082 545 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 PPP4CP60510 307 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 HSP90AA2PQ14568 343 aaPredicted RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 ZRSR2Q15696 482 aaKnown RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 HSP90AB3PQ58FF7 597 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 ARMCX6Q7L4S7 300 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 DRC7Q8IY82 874 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 CCDC102AQ96A19 550 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 RPS6KC1Q96S38 1066 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 PAGR1Q9BTK6 254 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 IRF2BPLQ9H1B7 796 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 TMX4Q9H1E5 349 aaPredicted RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 RSPH9Q9H1X1 276 aaPredicted RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 QTRT2Q9H974 415 aaKnown RBP3.53□□□□□ -1.84
UBBP3-201ENST00000445497 SPC25Q9HBM1 224 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 GABBR1Q9UBS5 961 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 TBX22Q9Y458 520 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 COL4A3BPQ9Y5P4 624 aa3.53□□□□□ -1.84
UBBP3-201ENST00000445497 CCDC189A1A4V9 331 aa3.52□□□□□ -1.85
UBBP3-201ENST00000445497 RRP9O43818 475 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms