RNA–Protein interactions for RNA: ENST00000445340.2

CDC40-205, Transcript of cell division cycle 40, humanhuman

TSL 5

Gene CDC40, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-205ENST00000445340 Q3C1V9 767 aa8.56□□□□□ -1.04
CDC40-205ENST00000445340 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
CDC40-205ENST00000445340 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
CDC40-205ENST00000445340 MMP16P51512 607 aa8.55□□□□□ -1.04
CDC40-205ENST00000445340 GMPR2Q9P2T1 348 aaKnown RBP8.55□□□□□ -1.04
CDC40-205ENST00000445340 WNT7AO00755 349 aa8.54□□□□□ -1.04
CDC40-205ENST00000445340 IRF6O14896 467 aa8.54□□□□□ -1.04
CDC40-205ENST00000445340 KDM4AO75164 1064 aa8.54□□□□□ -1.04
CDC40-205ENST00000445340 MAP2K5Q13163 448 aa8.54□□□□□ -1.04
CDC40-205ENST00000445340 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
CDC40-205ENST00000445340 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
CDC40-205ENST00000445340 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
CDC40-205ENST00000445340 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
CDC40-205ENST00000445340 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
CDC40-205ENST00000445340 SMPD1P17405 629 aa8.52□□□□□ -1.05
CDC40-205ENST00000445340 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
CDC40-205ENST00000445340 TRIM32Q13049 653 aa8.52□□□□□ -1.05
CDC40-205ENST00000445340 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
CDC40-205ENST00000445340 HLA-CQ95604 372 aa8.52□□□□□ -1.05
CDC40-205ENST00000445340 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
CDC40-205ENST00000445340 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
CDC40-205ENST00000445340 MINK1Q8N4C8 1332 aaPredicted RBP8.5□□□□□ -1.05
CDC40-205ENST00000445340 J3QL48 77 aa8.49□□□□□ -1.05
CDC40-205ENST00000445340 USP46P62068 366 aa8.49□□□□□ -1.05
CDC40-205ENST00000445340 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
CDC40-205ENST00000445340 HOXA2O43364 376 aa8.46□□□□□ -1.06
CDC40-205ENST00000445340 GUCA2AQ02747 115 aa8.46□□□□□ -1.06
CDC40-205ENST00000445340 RC3H1Q5TC82 1133 aaKnown RBP8.46□□□□□ -1.06
CDC40-205ENST00000445340 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.06
CDC40-205ENST00000445340 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
CDC40-205ENST00000445340 WFS1O76024 890 aa8.45□□□□□ -1.06
CDC40-205ENST00000445340 SKOR1P84550 965 aa8.45□□□□□ -1.06
CDC40-205ENST00000445340 HPS1Q92902 700 aa8.45□□□□□ -1.06
CDC40-205ENST00000445340 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
CDC40-205ENST00000445340 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
CDC40-205ENST00000445340 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
CDC40-205ENST00000445340 REPIN1Q9BWE0 567 aaKnown RBP8.43□□□□□ -1.06
CDC40-205ENST00000445340 GPCPD1Q9NPB8 672 aa8.43□□□□□ -1.06
CDC40-205ENST00000445340 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
CDC40-205ENST00000445340 CLCN1P35523 988 aa8.42□□□□□ -1.06
CDC40-205ENST00000445340 WNT7BP56706 349 aa8.42□□□□□ -1.06
CDC40-205ENST00000445340 NFX1Q12986 1120 aaKnown RBP8.42□□□□□ -1.06
CDC40-205ENST00000445340 JUNDP17535 347 aa8.41□□□□□ -1.06
CDC40-205ENST00000445340 PTCRAQ6ISU1 281 aaPredicted RBP8.41□□□□□ -1.06
CDC40-205ENST00000445340 NUTM1Q86Y26 1132 aa8.41□□□□□ -1.06
CDC40-205ENST00000445340 VSIG10Q8N0Z9 540 aa8.4□□□□□ -1.06
CDC40-205ENST00000445340 KRI1Q8N9T8 703 aaKnown RBP8.4□□□□□ -1.06
CDC40-205ENST00000445340 TRIM47Q96LD4 638 aa8.39□□□□□ -1.07
CDC40-205ENST00000445340 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
CDC40-205ENST00000445340 SIAH2O43255 324 aa8.38□□□□□ -1.07
CDC40-205ENST00000445340 ALDH1A1P00352 501 aa8.38□□□□□ -1.07
CDC40-205ENST00000445340 RETREG3Q86VR2 466 aa8.38□□□□□ -1.07
CDC40-205ENST00000445340 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
CDC40-205ENST00000445340 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
CDC40-205ENST00000445340 FDX1P10109 184 aa8.37□□□□□ -1.07
CDC40-205ENST00000445340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDC40-205ENST00000445340 TERTO14746 1132 aaKnown RBP8.36□□□□□ -1.07
CDC40-205ENST00000445340 SSTR3P32745 418 aaPredicted RBP8.36□□□□□ -1.07
CDC40-205ENST00000445340 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
CDC40-205ENST00000445340 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
CDC40-205ENST00000445340 WIPF1O43516 503 aa8.35□□□□□ -1.07
CDC40-205ENST00000445340 NDUFV2P19404 249 aa8.34□□□□□ -1.07
CDC40-205ENST00000445340 EHBP1Q8NDI1 1231 aa8.34□□□□□ -1.07
CDC40-205ENST00000445340 SPIRE2Q8WWL2 714 aa8.34□□□□□ -1.07
CDC40-205ENST00000445340 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
CDC40-205ENST00000445340 SH3BP2P78314 561 aa8.33□□□□□ -1.08
CDC40-205ENST00000445340 MS4A1P11836 297 aa8.32□□□□□ -1.08
CDC40-205ENST00000445340 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
CDC40-205ENST00000445340 CCNYL3P0C7X3 344 aa8.31□□□□□ -1.08
CDC40-205ENST00000445340 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
CDC40-205ENST00000445340 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
CDC40-205ENST00000445340 BAP1Q92560 729 aa8.3□□□□□ -1.08
CDC40-205ENST00000445340 STK17AQ9UEE5 414 aa8.3□□□□□ -1.08
CDC40-205ENST00000445340 WASF2Q9Y6W5 498 aa8.3□□□□□ -1.08
CDC40-205ENST00000445340 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
CDC40-205ENST00000445340 PTPRNQ16849 979 aa8.29□□□□□ -1.08
CDC40-205ENST00000445340 TRIM46Q7Z4K8 759 aa8.29□□□□□ -1.08
CDC40-205ENST00000445340 BMP1P13497 986 aa8.28□□□□□ -1.08
CDC40-205ENST00000445340 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
CDC40-205ENST00000445340 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
CDC40-205ENST00000445340 BARGINQ6ZT62 677 aa8.28□□□□□ -1.08
CDC40-205ENST00000445340 PRR7Q8TB68 274 aa8.28□□□□□ -1.08
CDC40-205ENST00000445340 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
CDC40-205ENST00000445340 TTLL12Q14166 644 aaPredicted RBP8.27□□□□□ -1.09
CDC40-205ENST00000445340 ZMYND10O75800 440 aa8.26□□□□□ -1.09
CDC40-205ENST00000445340 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
CDC40-205ENST00000445340 MTMR2Q13614 643 aa8.25□□□□□ -1.09
CDC40-205ENST00000445340 AMHR2Q16671 573 aa8.25□□□□□ -1.09
CDC40-205ENST00000445340 SLC16A10Q8TF71 515 aa8.25□□□□□ -1.09
CDC40-205ENST00000445340 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
CDC40-205ENST00000445340 SPDYE5A6NIY4 337 aa8.24□□□□□ -1.09
CDC40-205ENST00000445340 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
CDC40-205ENST00000445340 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
CDC40-205ENST00000445340 ZNF511Q8NB15 262 aa8.24□□□□□ -1.09
CDC40-205ENST00000445340 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
CDC40-205ENST00000445340 PCDHB15Q9Y5E8 787 aa8.23□□□□□ -1.09
CDC40-205ENST00000445340 TLL2Q9Y6L7 1015 aa8.23□□□□□ -1.09
CDC40-205ENST00000445340 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CDC40-205ENST00000445340 MPNDQ8N594 471 aa8.22□□□□□ -1.09
CDC40-205ENST00000445340 ZC3H15Q8WU90 426 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms