RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 MYT1Q01538 1121 aa12.42□□□□□ -0.42
FXR1-203ENST00000445140 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
FXR1-203ENST00000445140 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
FXR1-203ENST00000445140 NBPF1Q3BBV0 1214 aa12.41□□□□□ -0.42
FXR1-203ENST00000445140 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
FXR1-203ENST00000445140 MYOM1P52179 1685 aa12.4□□□□□ -0.42
FXR1-203ENST00000445140 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.42
FXR1-203ENST00000445140 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.42
FXR1-203ENST00000445140 LRRC7Q96NW7 1537 aa12.4□□□□□ -0.42
FXR1-203ENST00000445140 ROBO2Q9HCK4 1378 aa12.39□□□□□ -0.43
FXR1-203ENST00000445140 HSPA2P54652 639 aa12.39□□□□□ -0.43
FXR1-203ENST00000445140 NINLQ9Y2I6 1382 aa12.38□□□□□ -0.43
FXR1-203ENST00000445140 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
FXR1-203ENST00000445140 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
FXR1-203ENST00000445140 USP32Q8NFA0 1604 aa12.38□□□□□ -0.43
FXR1-203ENST00000445140 TESK2Q96S53 571 aa12.38□□□□□ -0.43
FXR1-203ENST00000445140 TAOK2Q9UL54 1235 aa12.38□□□□□ -0.43
FXR1-203ENST00000445140 AKAP12Q02952 1782 aa12.36□□□□□ -0.43
FXR1-203ENST00000445140 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
FXR1-203ENST00000445140 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
FXR1-203ENST00000445140 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
FXR1-203ENST00000445140 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
FXR1-203ENST00000445140 HSPA5P11021 654 aaKnown RBP12.34□□□□□ -0.43
FXR1-203ENST00000445140 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
FXR1-203ENST00000445140 ATP7BP35670 1465 aa12.33□□□□□ -0.44
FXR1-203ENST00000445140 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
FXR1-203ENST00000445140 TMEM132EQ6IEE7 984 aa12.33□□□□□ -0.44
FXR1-203ENST00000445140 ATAD2Q6PL18 1390 aa12.32□□□□□ -0.44
FXR1-203ENST00000445140 NRKQ7Z2Y5 1582 aa12.32□□□□□ -0.44
FXR1-203ENST00000445140 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
FXR1-203ENST00000445140 BRD4O60885 1362 aaPredicted RBP12.31□□□□□ -0.44
FXR1-203ENST00000445140 PLCB2Q00722 1185 aa12.31□□□□□ -0.44
FXR1-203ENST00000445140 ST20-MTHFSA0A0A6YYL1 179 aa12.3□□□□□ -0.44
FXR1-203ENST00000445140 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
FXR1-203ENST00000445140 PRAM1Q96QH2 718 aa12.3□□□□□ -0.44
FXR1-203ENST00000445140 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
FXR1-203ENST00000445140 MST1RQ04912 1400 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 TMF1P82094 1093 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 NHSL1Q5SYE7 1610 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 BCANQ96GW7 911 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 TMEM94Q12767 1356 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
FXR1-203ENST00000445140 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
FXR1-203ENST00000445140 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.45
FXR1-203ENST00000445140 WASLO00401 505 aaPredicted RBP12.27□□□□□ -0.45
FXR1-203ENST00000445140 ZNF335Q9H4Z2 1342 aaPredicted RBP12.26□□□□□ -0.45
FXR1-203ENST00000445140 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
FXR1-203ENST00000445140 TRPM3Q9HCF6 1732 aaPredicted RBP12.26□□□□□ -0.45
FXR1-203ENST00000445140 POGKQ9P215 609 aa12.26□□□□□ -0.45
FXR1-203ENST00000445140 MSH6P52701 1360 aa12.26□□□□□ -0.45
FXR1-203ENST00000445140 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
FXR1-203ENST00000445140 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
FXR1-203ENST00000445140 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
FXR1-203ENST00000445140 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
FXR1-203ENST00000445140 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
FXR1-203ENST00000445140 NPC1L1Q9UHC9 1359 aa12.24□□□□□ -0.45
FXR1-203ENST00000445140 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
FXR1-203ENST00000445140 KIF20BQ96Q89 1820 aa12.24□□□□□ -0.45
FXR1-203ENST00000445140 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
FXR1-203ENST00000445140 STK26Q9P289 416 aa12.24□□□□□ -0.45
FXR1-203ENST00000445140 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
FXR1-203ENST00000445140 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
FXR1-203ENST00000445140 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
FXR1-203ENST00000445140 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
FXR1-203ENST00000445140 FKBP8Q14318 412 aa12.23□□□□□ -0.45
FXR1-203ENST00000445140 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
FXR1-203ENST00000445140 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
FXR1-203ENST00000445140 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
FXR1-203ENST00000445140 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
FXR1-203ENST00000445140 CADPS2Q86UW7 1296 aa12.22□□□□□ -0.45
FXR1-203ENST00000445140 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
FXR1-203ENST00000445140 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
FXR1-203ENST00000445140 CDK19Q9BWU1 502 aa12.2□□□□□ -0.46
FXR1-203ENST00000445140 MARF1Q9Y4F3 1742 aaKnown RBP12.2□□□□□ -0.46
FXR1-203ENST00000445140 PRR36Q9H6K5 1346 aa12.2□□□□□ -0.46
FXR1-203ENST00000445140 COL22A1Q8NFW1 1626 aaPredicted RBP12.2□□□□□ -0.46
FXR1-203ENST00000445140 NSD2O96028 1365 aa12.19□□□□□ -0.46
FXR1-203ENST00000445140 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
FXR1-203ENST00000445140 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
FXR1-203ENST00000445140 C11orf95C9JLR9 678 aaPredicted RBP12.19□□□□□ -0.46
FXR1-203ENST00000445140 CCDC61Q9Y6R9 512 aa12.19□□□□□ -0.46
FXR1-203ENST00000445140 EDC4Q6P2E9 1401 aaKnown RBP12.18□□□□□ -0.46
FXR1-203ENST00000445140 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
FXR1-203ENST00000445140 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
FXR1-203ENST00000445140 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
FXR1-203ENST00000445140 PXDNQ92626 1479 aa12.17□□□□□ -0.46
FXR1-203ENST00000445140 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
FXR1-203ENST00000445140 USP6P35125 1406 aa12.17□□□□□ -0.46
FXR1-203ENST00000445140 ABCC6O95255 1503 aa12.17□□□□□ -0.46
FXR1-203ENST00000445140 SBNO1A3KN83 1393 aa12.16□□□□□ -0.46
FXR1-203ENST00000445140 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
FXR1-203ENST00000445140 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
FXR1-203ENST00000445140 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
FXR1-203ENST00000445140 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
FXR1-203ENST00000445140 USP31Q70CQ4 1352 aa12.15□□□□□ -0.47
FXR1-203ENST00000445140 ATF3P18847 181 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 SHPRHQ149N8 1683 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 A0A1W2PP64 1363 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms