RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 C1QTNF8P60827 252 aa14.09□□□□□ -0.15
LINC00642-203ENST00000444942 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC00642-203ENST00000444942 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
LINC00642-203ENST00000444942 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
LINC00642-203ENST00000444942 SEPT12Q8IYM1 358 aa14.08□□□□□ -0.16
LINC00642-203ENST00000444942 CAMTA1Q9Y6Y1 1673 aa14.07□□□□□ -0.16
LINC00642-203ENST00000444942 CEP350Q5VT06 3117 aa14.07□□□□□ -0.16
LINC00642-203ENST00000444942 C1orf167Q5SNV9 1468 aa14.07□□□□□ -0.16
LINC00642-203ENST00000444942 SLIT2O94813 1529 aa14.06□□□□□ -0.16
LINC00642-203ENST00000444942 RPRD2Q5VT52 1461 aaKnown RBP14.06□□□□□ -0.16
LINC00642-203ENST00000444942 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
LINC00642-203ENST00000444942 EN1Q05925 392 aaPredicted RBP14.06□□□□□ -0.16
LINC00642-203ENST00000444942 UNC5CLQ8IV45 518 aa14.06□□□□□ -0.16
LINC00642-203ENST00000444942 KRT27Q7Z3Y8 459 aa14.05□□□□□ -0.16
LINC00642-203ENST00000444942 CHD4Q14839 1912 aa14.04□□□□□ -0.16
LINC00642-203ENST00000444942 TNS1Q9HBL0 1735 aaKnown RBP14.04□□□□□ -0.16
LINC00642-203ENST00000444942 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
LINC00642-203ENST00000444942 NINLQ9Y2I6 1382 aa14.02□□□□□ -0.16
LINC00642-203ENST00000444942 DISP2A7MBM2 1401 aa14.02□□□□□ -0.16
LINC00642-203ENST00000444942 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.17
LINC00642-203ENST00000444942 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
LINC00642-203ENST00000444942 UTRNP46939 3433 aa14.01□□□□□ -0.17
LINC00642-203ENST00000444942 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
LINC00642-203ENST00000444942 NWD2Q9ULI1 1742 aa13.99□□□□□ -0.17
LINC00642-203ENST00000444942 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
LINC00642-203ENST00000444942 PLCH1Q4KWH8 1693 aa13.98□□□□□ -0.17
LINC00642-203ENST00000444942 VPS72Q15906 364 aa13.97□□□□□ -0.17
LINC00642-203ENST00000444942 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
LINC00642-203ENST00000444942 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
LINC00642-203ENST00000444942 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
LINC00642-203ENST00000444942 PXDNQ92626 1479 aa13.96□□□□□ -0.17
LINC00642-203ENST00000444942 RREB1Q92766 1687 aa13.96□□□□□ -0.17
LINC00642-203ENST00000444942 EZH2Q15910 746 aaKnown RBP13.96□□□□□ -0.18
LINC00642-203ENST00000444942 CHGAP10645 457 aaKnown RBP13.95□□□□□ -0.18
LINC00642-203ENST00000444942 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
LINC00642-203ENST00000444942 ADGRB2O60241 1585 aa13.94□□□□□ -0.18
LINC00642-203ENST00000444942 PCGF6Q9BYE7 350 aa13.94□□□□□ -0.18
LINC00642-203ENST00000444942 METP08581 1390 aa13.93□□□□□ -0.18
LINC00642-203ENST00000444942 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
LINC00642-203ENST00000444942 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
LINC00642-203ENST00000444942 SPON1Q9HCB6 807 aa13.93□□□□□ -0.18
LINC00642-203ENST00000444942 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
LINC00642-203ENST00000444942 ANKRD50Q9ULJ7 1429 aa13.91□□□□□ -0.18
LINC00642-203ENST00000444942 IQGAP3Q86VI3 1631 aa13.91□□□□□ -0.18
LINC00642-203ENST00000444942 PARD3Q8TEW0 1356 aa13.9□□□□□ -0.18
LINC00642-203ENST00000444942 KCNQ2O43526 872 aa13.9□□□□□ -0.18
LINC00642-203ENST00000444942 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
LINC00642-203ENST00000444942 ROCK1Q13464 1354 aa13.89□□□□□ -0.19
LINC00642-203ENST00000444942 A0A0G2JS52 829 aa13.88□□□□□ -0.19
LINC00642-203ENST00000444942 MYT1Q01538 1121 aa13.88□□□□□ -0.19
LINC00642-203ENST00000444942 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
LINC00642-203ENST00000444942 NRAPQ86VF7 1730 aa13.87□□□□□ -0.19
LINC00642-203ENST00000444942 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-203ENST00000444942 E9PCH4 1651 aa13.86□□□□□ -0.19
LINC00642-203ENST00000444942 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-203ENST00000444942 FAM98CQ17RN3 349 aaKnown RBP13.85□□□□□ -0.19
LINC00642-203ENST00000444942 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
LINC00642-203ENST00000444942 NRKQ7Z2Y5 1582 aa13.85□□□□□ -0.19
LINC00642-203ENST00000444942 FOXO3O43524 673 aa13.84□□□□□ -0.19
LINC00642-203ENST00000444942 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
LINC00642-203ENST00000444942 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
LINC00642-203ENST00000444942 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
LINC00642-203ENST00000444942 THSD7AQ9UPZ6 1657 aa13.84□□□□□ -0.19
LINC00642-203ENST00000444942 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.19
LINC00642-203ENST00000444942 NAIPQ13075 1403 aa13.83□□□□□ -0.2
LINC00642-203ENST00000444942 MYOM1P52179 1685 aa13.83□□□□□ -0.2
LINC00642-203ENST00000444942 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
LINC00642-203ENST00000444942 CDC42BPGQ6DT37 1551 aa13.82□□□□□ -0.2
LINC00642-203ENST00000444942 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
LINC00642-203ENST00000444942 NUP155O75694 1391 aa13.81□□□□□ -0.2
LINC00642-203ENST00000444942 ROBO2Q9HCK4 1378 aa13.81□□□□□ -0.2
LINC00642-203ENST00000444942 TRIM37O94972 964 aa13.81□□□□□ -0.2
LINC00642-203ENST00000444942 APBA3O96018 575 aa13.81□□□□□ -0.2
LINC00642-203ENST00000444942 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
LINC00642-203ENST00000444942 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
LINC00642-203ENST00000444942 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-203ENST00000444942 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
LINC00642-203ENST00000444942 FAM196AQ6ZSG2 479 aa13.77□□□□□ -0.21
LINC00642-203ENST00000444942 NEXMIFQ5QGS0 1516 aa13.77□□□□□ -0.21
LINC00642-203ENST00000444942 CCDC144AA2RUR9 1427 aa13.76□□□□□ -0.21
LINC00642-203ENST00000444942 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
LINC00642-203ENST00000444942 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
LINC00642-203ENST00000444942 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
LINC00642-203ENST00000444942 COL14A1Q05707 1796 aaKnown RBP13.74□□□□□ -0.21
LINC00642-203ENST00000444942 SYT17Q9BSW7 474 aa13.73□□□□□ -0.21
LINC00642-203ENST00000444942 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
LINC00642-203ENST00000444942 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
LINC00642-203ENST00000444942 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
LINC00642-203ENST00000444942 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
LINC00642-203ENST00000444942 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
LINC00642-203ENST00000444942 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
LINC00642-203ENST00000444942 PTGER2P43116 358 aa13.71□□□□□ -0.21
LINC00642-203ENST00000444942 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
LINC00642-203ENST00000444942 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.22
LINC00642-203ENST00000444942 ZNF326Q5BKZ1 582 aaKnown RBP13.71□□□□□ -0.22
LINC00642-203ENST00000444942 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.22
LINC00642-203ENST00000444942 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.22
LINC00642-203ENST00000444942 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
LINC00642-203ENST00000444942 RAB3GAP2Q9H2M9 1393 aa13.69□□□□□ -0.22
LINC00642-203ENST00000444942 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms