RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 UBAP1LF5GYI3 381 aa17.91■□□□□ 0.46
SMARCA4-204ENST00000444061 CASC1Q6TDU7 716 aa17.91■□□□□ 0.46
SMARCA4-204ENST00000444061 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-204ENST00000444061 PLEKHO1Q53GL0 409 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-204ENST00000444061 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
SMARCA4-204ENST00000444061 LRPPRCP42704 1394 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-204ENST00000444061 MYO5CQ9NQX4 1742 aa17.89■□□□□ 0.46
SMARCA4-204ENST00000444061 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
SMARCA4-204ENST00000444061 SCAF11Q99590 1463 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-204ENST00000444061 E9PSI1 815 aa17.89■□□□□ 0.45
SMARCA4-204ENST00000444061 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
SMARCA4-204ENST00000444061 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-204ENST00000444061 GAS2L2Q8NHY3 880 aa17.88■□□□□ 0.45
SMARCA4-204ENST00000444061 TAF7LQ5H9L4 462 aa17.88■□□□□ 0.45
SMARCA4-204ENST00000444061 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
SMARCA4-204ENST00000444061 TSPOAP1O95153 1857 aa17.88■□□□□ 0.45
SMARCA4-204ENST00000444061 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
SMARCA4-204ENST00000444061 RGS3P49796 1198 aa17.87■□□□□ 0.45
SMARCA4-204ENST00000444061 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
SMARCA4-204ENST00000444061 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
SMARCA4-204ENST00000444061 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
SMARCA4-204ENST00000444061 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
SMARCA4-204ENST00000444061 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-204ENST00000444061 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
SMARCA4-204ENST00000444061 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
SMARCA4-204ENST00000444061 TSPYL4Q9UJ04 414 aa17.85■□□□□ 0.45
SMARCA4-204ENST00000444061 NSD3Q9BZ95 1437 aa17.85■□□□□ 0.45
SMARCA4-204ENST00000444061 ADAMTS2O95450 1211 aa17.85■□□□□ 0.45
SMARCA4-204ENST00000444061 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
SMARCA4-204ENST00000444061 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-204ENST00000444061 GNAI1P63096 354 aa17.84■□□□□ 0.45
SMARCA4-204ENST00000444061 APBB1O00213 710 aa17.84■□□□□ 0.45
SMARCA4-204ENST00000444061 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-204ENST00000444061 MBD5Q9P267 1494 aa17.83■□□□□ 0.45
SMARCA4-204ENST00000444061 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.45
SMARCA4-204ENST00000444061 TTC37Q6PGP7 1564 aa17.82■□□□□ 0.44
SMARCA4-204ENST00000444061 NME9Q86XW9 330 aa17.82■□□□□ 0.44
SMARCA4-204ENST00000444061 DDX54Q8TDD1 881 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-204ENST00000444061 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
SMARCA4-204ENST00000444061 MLH3Q9UHC1 1453 aa17.82■□□□□ 0.44
SMARCA4-204ENST00000444061 KCNA6P17658 529 aa17.81■□□□□ 0.44
SMARCA4-204ENST00000444061 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
SMARCA4-204ENST00000444061 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
SMARCA4-204ENST00000444061 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
SMARCA4-204ENST00000444061 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
SMARCA4-204ENST00000444061 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
SMARCA4-204ENST00000444061 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
SMARCA4-204ENST00000444061 HMMRO75330 724 aa17.8■□□□□ 0.44
SMARCA4-204ENST00000444061 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-204ENST00000444061 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-204ENST00000444061 GLIPR1L2Q4G1C9 344 aa17.8■□□□□ 0.44
SMARCA4-204ENST00000444061 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
SMARCA4-204ENST00000444061 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
SMARCA4-204ENST00000444061 ACEP12821 1306 aa17.79■□□□□ 0.44
SMARCA4-204ENST00000444061 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-204ENST00000444061 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
SMARCA4-204ENST00000444061 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
SMARCA4-204ENST00000444061 B4GALNT3Q6L9W6 998 aa17.77■□□□□ 0.44
SMARCA4-204ENST00000444061 ABCC1P33527 1531 aa17.77■□□□□ 0.44
SMARCA4-204ENST00000444061 KCNJ4P48050 445 aa17.77■□□□□ 0.43
SMARCA4-204ENST00000444061 MAST1Q9Y2H9 1570 aa17.76■□□□□ 0.43
SMARCA4-204ENST00000444061 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
SMARCA4-204ENST00000444061 PZPP20742 1482 aa17.76■□□□□ 0.43
SMARCA4-204ENST00000444061 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
SMARCA4-204ENST00000444061 ZBED9Q6R2W3 1325 aa17.75■□□□□ 0.43
SMARCA4-204ENST00000444061 G3V3G9 751 aa17.75■□□□□ 0.43
SMARCA4-204ENST00000444061 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-204ENST00000444061 DCAF8Q5TAQ9 597 aa17.75■□□□□ 0.43
SMARCA4-204ENST00000444061 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-204ENST00000444061 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 PRAG1Q86YV5 1406 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 CABP4P57796 275 aa17.74■□□□□ 0.43
SMARCA4-204ENST00000444061 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-204ENST00000444061 NPATQ14207 1427 aa17.73■□□□□ 0.43
SMARCA4-204ENST00000444061 FKBP5Q13451 457 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-204ENST00000444061 C9orf78Q9NZ63 289 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-204ENST00000444061 PREX2Q70Z35 1606 aa17.71■□□□□ 0.43
SMARCA4-204ENST00000444061 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-204ENST00000444061 KDM6BO15054 1643 aa17.71■□□□□ 0.43
SMARCA4-204ENST00000444061 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-204ENST00000444061 HECW2Q9P2P5 1572 aa17.69■□□□□ 0.42
SMARCA4-204ENST00000444061 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
SMARCA4-204ENST00000444061 FCHSD2O94868 740 aa17.69■□□□□ 0.42
SMARCA4-204ENST00000444061 FGD1P98174 961 aa17.69■□□□□ 0.42
SMARCA4-204ENST00000444061 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 YTHDC2Q9H6S0 1430 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 LTKP29376 864 aa17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 AIMP1Q12904 312 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 TTC21AQ8NDW8 1320 aa17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 PNISRQ8TF01 805 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
SMARCA4-204ENST00000444061 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-204ENST00000444061 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
SMARCA4-204ENST00000444061 DISP3Q9P2K9 1392 aa17.67■□□□□ 0.42
SMARCA4-204ENST00000444061 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms