RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 CADPS2Q86UW7 1296 aa27.13■■□□□ 1.93
FAM3A-214ENST00000442929 RBM33Q96EV2 1170 aaKnown RBP27.13■■□□□ 1.93
FAM3A-214ENST00000442929 EIF3AQ14152 1382 aaKnown RBP27.12■■□□□ 1.93
FAM3A-214ENST00000442929 POGKQ9P215 609 aa27.12■■□□□ 1.93
FAM3A-214ENST00000442929 TRAK1Q9UPV9 953 aa27.12■■□□□ 1.93
FAM3A-214ENST00000442929 GPRASP1Q5JY77 1395 aa27.1■■□□□ 1.93
FAM3A-214ENST00000442929 ADGRB2O60241 1585 aa27.1■■□□□ 1.93
FAM3A-214ENST00000442929 NBPF8Q3BBV2 869 aa27.1■■□□□ 1.93
FAM3A-214ENST00000442929 QRICH2Q9H0J4 1663 aa27.09■■□□□ 1.93
FAM3A-214ENST00000442929 NBPF1Q3BBV0 1214 aa27.09■■□□□ 1.93
FAM3A-214ENST00000442929 PRAM1Q96QH2 718 aa27.09■■□□□ 1.93
FAM3A-214ENST00000442929 WAPLQ7Z5K2 1190 aa27.06■■□□□ 1.92
FAM3A-214ENST00000442929 FMN2Q9NZ56 1722 aa27.06■■□□□ 1.92
FAM3A-214ENST00000442929 PLEKHH1Q9ULM0 1364 aa27.05■■□□□ 1.92
FAM3A-214ENST00000442929 CARD11Q9BXL7 1154 aa27.04■■□□□ 1.92
FAM3A-214ENST00000442929 SCAF1Q9H7N4 1312 aaKnown RBP27.03■■□□□ 1.92
FAM3A-214ENST00000442929 ROBO1Q9Y6N7 1651 aa27.03■■□□□ 1.92
FAM3A-214ENST00000442929 CENPJQ9HC77 1338 aaPredicted RBP27■■□□□ 1.91
FAM3A-214ENST00000442929 PIP4K2BP78356 416 aa26.99■■□□□ 1.91
FAM3A-214ENST00000442929 SAFB2Q14151 953 aaKnown RBP eCLIP26.99■■□□□ 1.91
FAM3A-214ENST00000442929 SLAIN2Q9P270 581 aa26.99■■□□□ 1.91
FAM3A-214ENST00000442929 MST1RQ04912 1400 aa26.99■■□□□ 1.91
FAM3A-214ENST00000442929 ITSN1Q15811 1721 aa26.98■■□□□ 1.91
FAM3A-214ENST00000442929 KIF1AQ12756 1690 aa26.95■■□□□ 1.9
FAM3A-214ENST00000442929 MINK1Q8N4C8 1332 aaPredicted RBP26.93■■□□□ 1.9
FAM3A-214ENST00000442929 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
FAM3A-214ENST00000442929 TULP4Q9NRJ4 1543 aa26.92■■□□□ 1.9
FAM3A-214ENST00000442929 RGPD8O14715 1765 aaPredicted RBP26.92■■□□□ 1.9
FAM3A-214ENST00000442929 ANKARQ7Z5J8 1434 aa26.91■■□□□ 1.9
FAM3A-214ENST00000442929 SBNO2Q9Y2G9 1366 aa26.9■■□□□ 1.9
FAM3A-214ENST00000442929 PHLPP1O60346 1717 aa26.9■■□□□ 1.9
FAM3A-214ENST00000442929 NHSL1Q5SYE7 1610 aa26.89■■□□□ 1.9
FAM3A-214ENST00000442929 SLC24A1O60721 1099 aa26.88■■□□□ 1.89
FAM3A-214ENST00000442929 HIRIP3Q9BW71 556 aaPredicted RBP26.88■■□□□ 1.89
FAM3A-214ENST00000442929 AHDC1Q5TGY3 1603 aaPredicted RBP26.87■■□□□ 1.89
FAM3A-214ENST00000442929 USP47Q96K76 1375 aa26.87■■□□□ 1.89
FAM3A-214ENST00000442929 WASLO00401 505 aaPredicted RBP26.87■■□□□ 1.89
FAM3A-214ENST00000442929 USP32Q8NFA0 1604 aa26.87■■□□□ 1.89
FAM3A-214ENST00000442929 MED1Q15648 1581 aaPredicted RBP26.84■■□□□ 1.89
FAM3A-214ENST00000442929 TOPAZ1Q8N9V7 1692 aa26.84■■□□□ 1.89
FAM3A-214ENST00000442929 EVC2Q86UK5 1308 aa26.84■■□□□ 1.89
FAM3A-214ENST00000442929 BRINP3Q76B58 766 aa26.82■■□□□ 1.88
FAM3A-214ENST00000442929 ATP7BP35670 1465 aa26.81■■□□□ 1.88
FAM3A-214ENST00000442929 ESCO1Q5FWF5 840 aa26.8■■□□□ 1.88
FAM3A-214ENST00000442929 NUTM2FA1L443 756 aa26.79■■□□□ 1.88
FAM3A-214ENST00000442929 CDK19Q9BWU1 502 aa26.79■■□□□ 1.88
FAM3A-214ENST00000442929 SRPK2P78362 688 aaKnown RBP26.78■■□□□ 1.88
FAM3A-214ENST00000442929 COL16A1Q07092 1604 aaPredicted RBP26.77■■□□□ 1.88
FAM3A-214ENST00000442929 NPHP3Q7Z494 1330 aa26.75■■□□□ 1.87
FAM3A-214ENST00000442929 ST20-MTHFSA0A0A6YYL1 179 aa26.75■■□□□ 1.87
FAM3A-214ENST00000442929 ORAI2Q96SN7 254 aa26.75■■□□□ 1.87
FAM3A-214ENST00000442929 HSPA1LP34931 641 aa26.74■■□□□ 1.87
FAM3A-214ENST00000442929 EIF4G2P78344 907 aaKnown RBP eCLIP26.74■■□□□ 1.87
FAM3A-214ENST00000442929 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
FAM3A-214ENST00000442929 NUDT16Q96DE0 195 aaKnown RBP26.73■■□□□ 1.87
FAM3A-214ENST00000442929 PHF8Q9UPP1 1060 aa26.73■■□□□ 1.87
FAM3A-214ENST00000442929 SHPRHQ149N8 1683 aa26.7■■□□□ 1.87
FAM3A-214ENST00000442929 ZEB1P37275 1124 aaPredicted RBP26.7■■□□□ 1.86
FAM3A-214ENST00000442929 CCDC61Q9Y6R9 512 aa26.7■■□□□ 1.86
FAM3A-214ENST00000442929 PRR36Q9H6K5 1346 aa26.69■■□□□ 1.86
FAM3A-214ENST00000442929 TMF1P82094 1093 aa26.69■■□□□ 1.86
FAM3A-214ENST00000442929 PPIP5K1Q6PFW1 1433 aa26.68■■□□□ 1.86
FAM3A-214ENST00000442929 CDCA8Q53HL2 280 aa26.68■■□□□ 1.86
FAM3A-214ENST00000442929 PUS7Q96PZ0 661 aaKnown RBP26.67■■□□□ 1.86
FAM3A-214ENST00000442929 TESK2Q96S53 571 aa26.67■■□□□ 1.86
FAM3A-214ENST00000442929 CABP2Q9NPB3 220 aa26.67■■□□□ 1.86
FAM3A-214ENST00000442929 PXDNQ92626 1479 aa26.66■■□□□ 1.86
FAM3A-214ENST00000442929 AKAP12Q02952 1782 aa26.64■■□□□ 1.86
FAM3A-214ENST00000442929 FOXO3O43524 673 aa26.64■■□□□ 1.86
FAM3A-214ENST00000442929 PSME1Q06323 249 aa26.64■■□□□ 1.86
FAM3A-214ENST00000442929 NGDNQ8NEJ9 315 aaKnown RBP26.64■■□□□ 1.86
FAM3A-214ENST00000442929 LRRC59Q96AG4 307 aaKnown RBP26.64■■□□□ 1.86
FAM3A-214ENST00000442929 SOS2Q07890 1332 aaPredicted RBP26.64■■□□□ 1.85
FAM3A-214ENST00000442929 JCADQ9P266 1359 aa26.63■■□□□ 1.85
FAM3A-214ENST00000442929 NINLQ9Y2I6 1382 aa26.63■■□□□ 1.85
FAM3A-214ENST00000442929 PMFBP1Q8TBY8 1022 aa26.63■■□□□ 1.85
FAM3A-214ENST00000442929 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
FAM3A-214ENST00000442929 POLR3AO14802 1390 aaPredicted RBP26.61■■□□□ 1.85
FAM3A-214ENST00000442929 PLEKHG3A1L390 1219 aa26.61■■□□□ 1.85
FAM3A-214ENST00000442929 HSPA5P11021 654 aaKnown RBP26.61■■□□□ 1.85
FAM3A-214ENST00000442929 PHF23Q9BUL5 403 aaPredicted RBP26.61■■□□□ 1.85
FAM3A-214ENST00000442929 COL22A1Q8NFW1 1626 aaPredicted RBP26.58■■□□□ 1.85
FAM3A-214ENST00000442929 KRT28Q7Z3Y7 464 aa26.58■■□□□ 1.85
FAM3A-214ENST00000442929 DDX17Q92841 729 aaKnown RBP26.58■■□□□ 1.85
FAM3A-214ENST00000442929 SBNO1A3KN83 1393 aa26.58■■□□□ 1.84
FAM3A-214ENST00000442929 BRD4O60885 1362 aaPredicted RBP26.58■■□□□ 1.84
FAM3A-214ENST00000442929 MON2Q7Z3U7 1717 aa26.57■■□□□ 1.84
FAM3A-214ENST00000442929 TNS3Q68CZ2 1445 aa26.56■■□□□ 1.84
FAM3A-214ENST00000442929 ACEP12821 1306 aa26.56■■□□□ 1.84
FAM3A-214ENST00000442929 ALS2Q96Q42 1657 aa26.56■■□□□ 1.84
FAM3A-214ENST00000442929 CABP1Q9NZU7 370 aa26.54■■□□□ 1.84
FAM3A-214ENST00000442929 ARHGEF10O15013 1369 aa26.54■■□□□ 1.84
FAM3A-214ENST00000442929 XPCQ01831 940 aaPredicted RBP26.53■■□□□ 1.84
FAM3A-214ENST00000442929 SPATA31A6Q5VVP1 1343 aa26.53■■□□□ 1.84
FAM3A-214ENST00000442929 MYOM1P52179 1685 aa26.53■■□□□ 1.84
FAM3A-214ENST00000442929 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
FAM3A-214ENST00000442929 ZNF692Q9BU19 519 aaPredicted RBP26.52■■□□□ 1.84
FAM3A-214ENST00000442929 PNPLA6Q8IY17 1366 aa26.51■■□□□ 1.83
FAM3A-214ENST00000442929 NRKQ7Z2Y5 1582 aa26.5■■□□□ 1.83
FAM3A-214ENST00000442929 USP6P35125 1406 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms