RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
SLC48A1-201ENST00000442218 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
SLC48A1-201ENST00000442218 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
SLC48A1-201ENST00000442218 KIF1BO60333 1816 aa17.03■□□□□ 0.32
SLC48A1-201ENST00000442218 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
SLC48A1-201ENST00000442218 SLKQ9H2G2 1235 aaPredicted RBP17.02■□□□□ 0.32
SLC48A1-201ENST00000442218 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.31
SLC48A1-201ENST00000442218 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
SLC48A1-201ENST00000442218 NOS1P29475 1434 aa17■□□□□ 0.31
SLC48A1-201ENST00000442218 MLECQ14165 292 aa17■□□□□ 0.31
SLC48A1-201ENST00000442218 ZNF521Q96K83 1311 aa17■□□□□ 0.31
SLC48A1-201ENST00000442218 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
SLC48A1-201ENST00000442218 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
SLC48A1-201ENST00000442218 LAMC1P11047 1609 aa16.99■□□□□ 0.31
SLC48A1-201ENST00000442218 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
SLC48A1-201ENST00000442218 SYNMO15061 1565 aa16.97■□□□□ 0.31
SLC48A1-201ENST00000442218 FBXO31Q5XUX0 539 aaPredicted RBP16.97■□□□□ 0.31
SLC48A1-201ENST00000442218 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
SLC48A1-201ENST00000442218 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
SLC48A1-201ENST00000442218 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
SLC48A1-201ENST00000442218 CABP2Q9NPB3 220 aa16.97■□□□□ 0.31
SLC48A1-201ENST00000442218 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
SLC48A1-201ENST00000442218 IDI1Q13907 227 aa16.96■□□□□ 0.31
SLC48A1-201ENST00000442218 FBLN1P23142 703 aa16.96■□□□□ 0.3
SLC48A1-201ENST00000442218 RLBP1P12271 317 aa16.95■□□□□ 0.3
SLC48A1-201ENST00000442218 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
SLC48A1-201ENST00000442218 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
SLC48A1-201ENST00000442218 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
SLC48A1-201ENST00000442218 ARHGAP31Q2M1Z3 1444 aa16.95■□□□□ 0.3
SLC48A1-201ENST00000442218 GSE1Q14687 1217 aa16.94■□□□□ 0.3
SLC48A1-201ENST00000442218 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
SLC48A1-201ENST00000442218 MYOM2P54296 1465 aa16.94■□□□□ 0.3
SLC48A1-201ENST00000442218 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
SLC48A1-201ENST00000442218 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
SLC48A1-201ENST00000442218 E9PSI1 815 aa16.92■□□□□ 0.3
SLC48A1-201ENST00000442218 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
SLC48A1-201ENST00000442218 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
SLC48A1-201ENST00000442218 ASXL1Q8IXJ9 1541 aa16.91■□□□□ 0.3
SLC48A1-201ENST00000442218 MTHFSP49914 203 aa16.91■□□□□ 0.3
SLC48A1-201ENST00000442218 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
SLC48A1-201ENST00000442218 REREQ9P2R6 1566 aa16.91■□□□□ 0.3
SLC48A1-201ENST00000442218 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
SLC48A1-201ENST00000442218 AGLP35573 1532 aa16.9■□□□□ 0.3
SLC48A1-201ENST00000442218 ARHGEF40Q8TER5 1519 aa16.9■□□□□ 0.3
SLC48A1-201ENST00000442218 PREX1Q8TCU6 1659 aa16.9■□□□□ 0.3
SLC48A1-201ENST00000442218 NRXN1Q9ULB1 1477 aa16.9■□□□□ 0.3
SLC48A1-201ENST00000442218 PPLO60437 1756 aa16.9■□□□□ 0.3
SLC48A1-201ENST00000442218 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.3
SLC48A1-201ENST00000442218 NSD3Q9BZ95 1437 aa16.89■□□□□ 0.29
SLC48A1-201ENST00000442218 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
SLC48A1-201ENST00000442218 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
SLC48A1-201ENST00000442218 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 USP35Q9P2H5 1018 aa16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 TRMT2AQ8IZ69 625 aaKnown RBP16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
SLC48A1-201ENST00000442218 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
SLC48A1-201ENST00000442218 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
SLC48A1-201ENST00000442218 POGKQ9P215 609 aa16.86■□□□□ 0.29
SLC48A1-201ENST00000442218 PIK3C2GO75747 1445 aa16.86■□□□□ 0.29
SLC48A1-201ENST00000442218 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
SLC48A1-201ENST00000442218 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
SLC48A1-201ENST00000442218 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
SLC48A1-201ENST00000442218 USP19O94966 1318 aa16.85■□□□□ 0.29
SLC48A1-201ENST00000442218 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
SLC48A1-201ENST00000442218 RARSP54136 660 aaKnown RBP16.84■□□□□ 0.29
SLC48A1-201ENST00000442218 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
SLC48A1-201ENST00000442218 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.29
SLC48A1-201ENST00000442218 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.29
SLC48A1-201ENST00000442218 MYOM1P52179 1685 aa16.83■□□□□ 0.28
SLC48A1-201ENST00000442218 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
SLC48A1-201ENST00000442218 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
SLC48A1-201ENST00000442218 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
SLC48A1-201ENST00000442218 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
SLC48A1-201ENST00000442218 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
SLC48A1-201ENST00000442218 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
SLC48A1-201ENST00000442218 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
SLC48A1-201ENST00000442218 FTSJ3Q8IY81 847 aaKnown RBP16.8■□□□□ 0.28
SLC48A1-201ENST00000442218 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
SLC48A1-201ENST00000442218 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
SLC48A1-201ENST00000442218 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
SLC48A1-201ENST00000442218 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
SLC48A1-201ENST00000442218 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
SLC48A1-201ENST00000442218 INSRP06213 1382 aa16.78■□□□□ 0.28
SLC48A1-201ENST00000442218 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
SLC48A1-201ENST00000442218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
SLC48A1-201ENST00000442218 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
SLC48A1-201ENST00000442218 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
SLC48A1-201ENST00000442218 PDE3AQ14432 1141 aa16.77■□□□□ 0.27
SLC48A1-201ENST00000442218 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
SLC48A1-201ENST00000442218 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
SLC48A1-201ENST00000442218 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
SLC48A1-201ENST00000442218 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
SLC48A1-201ENST00000442218 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
SLC48A1-201ENST00000442218 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
SLC48A1-201ENST00000442218 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
SLC48A1-201ENST00000442218 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms