RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
ERGIC3-208ENST00000442139 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
ERGIC3-208ENST00000442139 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
ERGIC3-208ENST00000442139 FMN2Q9NZ56 1722 aa17.64■□□□□ 0.41
ERGIC3-208ENST00000442139 SLC24A1O60721 1099 aa17.64■□□□□ 0.41
ERGIC3-208ENST00000442139 FBXO41Q8TF61 875 aa17.64■□□□□ 0.41
ERGIC3-208ENST00000442139 PRAM1Q96QH2 718 aa17.64■□□□□ 0.41
ERGIC3-208ENST00000442139 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
ERGIC3-208ENST00000442139 UBAP1LF5GYI3 381 aa17.63■□□□□ 0.41
ERGIC3-208ENST00000442139 ITSN1Q15811 1721 aa17.62■□□□□ 0.41
ERGIC3-208ENST00000442139 WAPLQ7Z5K2 1190 aa17.61■□□□□ 0.41
ERGIC3-208ENST00000442139 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
ERGIC3-208ENST00000442139 SBNO2Q9Y2G9 1366 aa17.59■□□□□ 0.41
ERGIC3-208ENST00000442139 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
ERGIC3-208ENST00000442139 RBM33Q96EV2 1170 aaKnown RBP17.58■□□□□ 0.4
ERGIC3-208ENST00000442139 SLAIN2Q9P270 581 aa17.58■□□□□ 0.4
ERGIC3-208ENST00000442139 KIF1AQ12756 1690 aa17.58■□□□□ 0.4
ERGIC3-208ENST00000442139 ROBO1Q9Y6N7 1651 aa17.58■□□□□ 0.4
ERGIC3-208ENST00000442139 ANKARQ7Z5J8 1434 aa17.57■□□□□ 0.4
ERGIC3-208ENST00000442139 RGPD8O14715 1765 aaPredicted RBP17.57■□□□□ 0.4
ERGIC3-208ENST00000442139 MST1RQ04912 1400 aa17.56■□□□□ 0.4
ERGIC3-208ENST00000442139 TULP4Q9NRJ4 1543 aa17.55■□□□□ 0.4
ERGIC3-208ENST00000442139 USP47Q96K76 1375 aa17.53■□□□□ 0.4
ERGIC3-208ENST00000442139 C1orf167Q5SNV9 1468 aa17.53■□□□□ 0.4
ERGIC3-208ENST00000442139 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
ERGIC3-208ENST00000442139 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
ERGIC3-208ENST00000442139 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
ERGIC3-208ENST00000442139 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.4
ERGIC3-208ENST00000442139 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.4
ERGIC3-208ENST00000442139 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
ERGIC3-208ENST00000442139 AHDC1Q5TGY3 1603 aaPredicted RBP17.5■□□□□ 0.39
ERGIC3-208ENST00000442139 PHLPP1O60346 1717 aa17.5■□□□□ 0.39
ERGIC3-208ENST00000442139 TOPAZ1Q8N9V7 1692 aa17.5■□□□□ 0.39
ERGIC3-208ENST00000442139 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
ERGIC3-208ENST00000442139 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
ERGIC3-208ENST00000442139 PIP4K2BP78356 416 aa17.49■□□□□ 0.39
ERGIC3-208ENST00000442139 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
ERGIC3-208ENST00000442139 PUS7Q96PZ0 661 aaKnown RBP17.48■□□□□ 0.39
ERGIC3-208ENST00000442139 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
ERGIC3-208ENST00000442139 HIRIP3Q9BW71 556 aaPredicted RBP17.46■□□□□ 0.39
ERGIC3-208ENST00000442139 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
ERGIC3-208ENST00000442139 ATP7BP35670 1465 aa17.45■□□□□ 0.38
ERGIC3-208ENST00000442139 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
ERGIC3-208ENST00000442139 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
ERGIC3-208ENST00000442139 BRINP3Q76B58 766 aa17.45■□□□□ 0.38
ERGIC3-208ENST00000442139 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
ERGIC3-208ENST00000442139 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
ERGIC3-208ENST00000442139 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
ERGIC3-208ENST00000442139 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
ERGIC3-208ENST00000442139 TMF1P82094 1093 aa17.43■□□□□ 0.38
ERGIC3-208ENST00000442139 NINLQ9Y2I6 1382 aa17.42■□□□□ 0.38
ERGIC3-208ENST00000442139 NUDT16Q96DE0 195 aaKnown RBP17.42■□□□□ 0.38
ERGIC3-208ENST00000442139 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
ERGIC3-208ENST00000442139 COL16A1Q07092 1604 aaPredicted RBP17.42■□□□□ 0.38
ERGIC3-208ENST00000442139 TESK2Q96S53 571 aa17.41■□□□□ 0.38
ERGIC3-208ENST00000442139 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
ERGIC3-208ENST00000442139 SHPRHQ149N8 1683 aa17.4■□□□□ 0.38
ERGIC3-208ENST00000442139 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
ERGIC3-208ENST00000442139 BRD4O60885 1362 aaPredicted RBP17.39■□□□□ 0.37
ERGIC3-208ENST00000442139 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
ERGIC3-208ENST00000442139 NUTM2FA1L443 756 aa17.38■□□□□ 0.37
ERGIC3-208ENST00000442139 PSME1Q06323 249 aa17.38■□□□□ 0.37
ERGIC3-208ENST00000442139 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
ERGIC3-208ENST00000442139 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
ERGIC3-208ENST00000442139 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
ERGIC3-208ENST00000442139 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
ERGIC3-208ENST00000442139 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-208ENST00000442139 CABP2Q9NPB3 220 aa17.36■□□□□ 0.37
ERGIC3-208ENST00000442139 SOS2Q07890 1332 aaPredicted RBP17.36■□□□□ 0.37
ERGIC3-208ENST00000442139 PXDNQ92626 1479 aa17.36■□□□□ 0.37
ERGIC3-208ENST00000442139 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
ERGIC3-208ENST00000442139 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-208ENST00000442139 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-208ENST00000442139 HSPA1LP34931 641 aa17.35■□□□□ 0.37
ERGIC3-208ENST00000442139 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-208ENST00000442139 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-208ENST00000442139 SBNO1A3KN83 1393 aa17.34■□□□□ 0.37
ERGIC3-208ENST00000442139 FOXO3O43524 673 aa17.34■□□□□ 0.37
ERGIC3-208ENST00000442139 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.37
ERGIC3-208ENST00000442139 JCADQ9P266 1359 aa17.33■□□□□ 0.36
ERGIC3-208ENST00000442139 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
ERGIC3-208ENST00000442139 DISP3Q9P2K9 1392 aa17.31■□□□□ 0.36
ERGIC3-208ENST00000442139 ACEP12821 1306 aa17.31■□□□□ 0.36
ERGIC3-208ENST00000442139 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
ERGIC3-208ENST00000442139 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
ERGIC3-208ENST00000442139 MYOM1P52179 1685 aa17.3■□□□□ 0.36
ERGIC3-208ENST00000442139 KRT28Q7Z3Y7 464 aa17.3■□□□□ 0.36
ERGIC3-208ENST00000442139 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
ERGIC3-208ENST00000442139 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
ERGIC3-208ENST00000442139 SPATA31A6Q5VVP1 1343 aa17.29■□□□□ 0.36
ERGIC3-208ENST00000442139 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
ERGIC3-208ENST00000442139 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
ERGIC3-208ENST00000442139 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-208ENST00000442139 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
ERGIC3-208ENST00000442139 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-208ENST00000442139 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
ERGIC3-208ENST00000442139 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
ERGIC3-208ENST00000442139 USP6P35125 1406 aa17.27■□□□□ 0.35
ERGIC3-208ENST00000442139 ANKRD36BQ8N2N9 1353 aa17.26■□□□□ 0.35
ERGIC3-208ENST00000442139 MED1Q15648 1581 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms