RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 CFAP70Q5T0N1 1121 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
LDB2-202ENST00000441778 PHF23Q9BUL5 403 aaPredicted RBP11.43□□□□□ -0.58
LDB2-202ENST00000441778 CHD1O14646 1710 aa11.43□□□□□ -0.58
LDB2-202ENST00000441778 MROH2AA6NES4 1674 aa11.43□□□□□ -0.58
LDB2-202ENST00000441778 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
LDB2-202ENST00000441778 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
LDB2-202ENST00000441778 MYOM2P54296 1465 aa11.43□□□□□ -0.58
LDB2-202ENST00000441778 ZC3H13Q5T200 1668 aaKnown RBP11.42□□□□□ -0.58
LDB2-202ENST00000441778 AAMPQ13685 434 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 RUNDC1Q96C34 613 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 PANK2Q9BZ23 570 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 KIF1BO60333 1816 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 MCM4P33991 863 aa11.42□□□□□ -0.58
LDB2-202ENST00000441778 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
LDB2-202ENST00000441778 ZCCHC11Q5TAX3 1644 aaKnown RBP11.41□□□□□ -0.58
LDB2-202ENST00000441778 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
LDB2-202ENST00000441778 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
LDB2-202ENST00000441778 GZF1Q9H116 711 aaPredicted RBP11.41□□□□□ -0.58
LDB2-202ENST00000441778 RWDD1Q9H446 243 aaPredicted RBP11.4□□□□□ -0.58
LDB2-202ENST00000441778 EFCAB2Q5VUJ9 269 aa11.4□□□□□ -0.59
LDB2-202ENST00000441778 WDR63Q8IWG1 891 aa11.4□□□□□ -0.59
LDB2-202ENST00000441778 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
LDB2-202ENST00000441778 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
LDB2-202ENST00000441778 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
LDB2-202ENST00000441778 ZNF518AQ6AHZ1 1483 aa11.39□□□□□ -0.59
LDB2-202ENST00000441778 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
LDB2-202ENST00000441778 MVPQ14764 893 aaKnown RBP11.38□□□□□ -0.59
LDB2-202ENST00000441778 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
LDB2-202ENST00000441778 KANK1Q14678 1352 aa11.38□□□□□ -0.59
LDB2-202ENST00000441778 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
LDB2-202ENST00000441778 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
LDB2-202ENST00000441778 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
LDB2-202ENST00000441778 MFAP1P55081 439 aaKnown RBP11.37□□□□□ -0.59
LDB2-202ENST00000441778 AFAP1Q8N556 730 aa11.37□□□□□ -0.59
LDB2-202ENST00000441778 CHMP5Q9NZZ3 219 aa11.37□□□□□ -0.59
LDB2-202ENST00000441778 NRXN1Q9ULB1 1477 aa11.37□□□□□ -0.59
LDB2-202ENST00000441778 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
LDB2-202ENST00000441778 TRAK2O60296 914 aa11.37□□□□□ -0.59
LDB2-202ENST00000441778 INO80Q9ULG1 1556 aaPredicted RBP11.37□□□□□ -0.59
LDB2-202ENST00000441778 CCDC27Q2M243 656 aa11.36□□□□□ -0.59
LDB2-202ENST00000441778 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
LDB2-202ENST00000441778 CLCN1P35523 988 aa11.36□□□□□ -0.59
LDB2-202ENST00000441778 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
LDB2-202ENST00000441778 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
LDB2-202ENST00000441778 SETBP1Q9Y6X0 1596 aa11.35□□□□□ -0.59
LDB2-202ENST00000441778 MTHFSP49914 203 aa11.35□□□□□ -0.59
LDB2-202ENST00000441778 ZKSCAN2Q63HK3 967 aa11.35□□□□□ -0.59
LDB2-202ENST00000441778 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
LDB2-202ENST00000441778 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
LDB2-202ENST00000441778 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
LDB2-202ENST00000441778 FTSJ3Q8IY81 847 aaKnown RBP11.34□□□□□ -0.59
LDB2-202ENST00000441778 NAP1L5Q96NT1 182 aaPredicted RBP11.34□□□□□ -0.59
LDB2-202ENST00000441778 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
LDB2-202ENST00000441778 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
LDB2-202ENST00000441778 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
LDB2-202ENST00000441778 TSR2Q969E8 191 aaKnown RBP11.33□□□□□ -0.6
LDB2-202ENST00000441778 NOS1P29475 1434 aa11.33□□□□□ -0.6
LDB2-202ENST00000441778 DDIT3P35638 169 aa11.33□□□□□ -0.6
LDB2-202ENST00000441778 MRE11P49959 708 aa11.33□□□□□ -0.6
LDB2-202ENST00000441778 ADGRL1O94910 1474 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 KIF3BO15066 747 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 HDAC1Q13547 482 aaPredicted RBP11.32□□□□□ -0.6
LDB2-202ENST00000441778 PPLO60437 1756 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 ADGRB3O60242 1522 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 ARAP3Q8WWN8 1544 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 TRIM27P14373 513 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 GRPEL1Q9HAV7 217 aa11.32□□□□□ -0.6
LDB2-202ENST00000441778 ADGRB1O14514 1584 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 DDX11L8A8MPP1 907 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
LDB2-202ENST00000441778 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
LDB2-202ENST00000441778 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
LDB2-202ENST00000441778 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
LDB2-202ENST00000441778 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
LDB2-202ENST00000441778 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
LDB2-202ENST00000441778 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
LDB2-202ENST00000441778 CFAP65Q6ZU64 1925 aaKnown RBP11.3□□□□□ -0.6
LDB2-202ENST00000441778 SSH1Q8WYL5 1049 aa11.3□□□□□ -0.6
LDB2-202ENST00000441778 ABCA9Q8IUA7 1624 aa11.29□□□□□ -0.6
LDB2-202ENST00000441778 RBM25P49756 843 aaKnown RBP11.29□□□□□ -0.6
LDB2-202ENST00000441778 DDX19BQ9UMR2 479 aa11.29□□□□□ -0.6
LDB2-202ENST00000441778 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
LDB2-202ENST00000441778 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
LDB2-202ENST00000441778 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
LDB2-202ENST00000441778 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
LDB2-202ENST00000441778 TULP4Q9NRJ4 1543 aa11.28□□□□□ -0.6
LDB2-202ENST00000441778 UHRF1BP1LA0JNW5 1464 aa11.28□□□□□ -0.6
LDB2-202ENST00000441778 GAS2L3Q86XJ1 694 aa11.28□□□□□ -0.6
LDB2-202ENST00000441778 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
LDB2-202ENST00000441778 SNX21Q969T3 373 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms