RNA–Protein interactions for RNA: ENST00000441719.5

KDM3A-205, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 8,741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-205ENST00000441719 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
KDM3A-205ENST00000441719 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
KDM3A-205ENST00000441719 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
KDM3A-205ENST00000441719 CUX1P39880 1505 aa13.1□□□□□ -0.31
KDM3A-205ENST00000441719 MTHFSP49914 203 aa13.1□□□□□ -0.31
KDM3A-205ENST00000441719 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
KDM3A-205ENST00000441719 REC8O95072 547 aa13.09□□□□□ -0.31
KDM3A-205ENST00000441719 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
KDM3A-205ENST00000441719 GOLGA6L1Q8N7Z2 621 aa13.09□□□□□ -0.31
KDM3A-205ENST00000441719 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
KDM3A-205ENST00000441719 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
KDM3A-205ENST00000441719 ATP6V1DQ9Y5K8 247 aa13.09□□□□□ -0.31
KDM3A-205ENST00000441719 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
KDM3A-205ENST00000441719 CCDC7Q96M83 1385 aa13.08□□□□□ -0.32
KDM3A-205ENST00000441719 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
KDM3A-205ENST00000441719 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
KDM3A-205ENST00000441719 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
KDM3A-205ENST00000441719 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
KDM3A-205ENST00000441719 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
KDM3A-205ENST00000441719 INTS3Q68E01 1043 aaKnown RBP13.06□□□□□ -0.32
KDM3A-205ENST00000441719 ERC2O15083 957 aa13.06□□□□□ -0.32
KDM3A-205ENST00000441719 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
KDM3A-205ENST00000441719 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
KDM3A-205ENST00000441719 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
KDM3A-205ENST00000441719 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
KDM3A-205ENST00000441719 CCDC47Q96A33 483 aaKnown RBP13.05□□□□□ -0.32
KDM3A-205ENST00000441719 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
KDM3A-205ENST00000441719 TPM1P09493 284 aa13.05□□□□□ -0.32
KDM3A-205ENST00000441719 SMC3Q9UQE7 1217 aa13.05□□□□□ -0.32
KDM3A-205ENST00000441719 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
KDM3A-205ENST00000441719 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
KDM3A-205ENST00000441719 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
KDM3A-205ENST00000441719 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
KDM3A-205ENST00000441719 CCDC43Q96MW1 224 aaKnown RBP13.04□□□□□ -0.32
KDM3A-205ENST00000441719 PRKAR2BP31323 418 aa13.04□□□□□ -0.32
KDM3A-205ENST00000441719 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
KDM3A-205ENST00000441719 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
KDM3A-205ENST00000441719 KIF21BO75037 1637 aa13.04□□□□□ -0.32
KDM3A-205ENST00000441719 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
KDM3A-205ENST00000441719 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
KDM3A-205ENST00000441719 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
KDM3A-205ENST00000441719 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
KDM3A-205ENST00000441719 C1orf115Q9H7X2 142 aa13.03□□□□□ -0.32
KDM3A-205ENST00000441719 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
KDM3A-205ENST00000441719 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.32
KDM3A-205ENST00000441719 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.33
KDM3A-205ENST00000441719 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.33
KDM3A-205ENST00000441719 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
KDM3A-205ENST00000441719 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
KDM3A-205ENST00000441719 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
KDM3A-205ENST00000441719 FSD1Q9BTV5 496 aa13.02□□□□□ -0.33
KDM3A-205ENST00000441719 TOM1L2Q6ZVM7 507 aa13.02□□□□□ -0.33
KDM3A-205ENST00000441719 TCP11L2Q8N4U5 519 aa13.02□□□□□ -0.33
KDM3A-205ENST00000441719 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
KDM3A-205ENST00000441719 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
KDM3A-205ENST00000441719 CABP4P57796 275 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
KDM3A-205ENST00000441719 NESP48681 1621 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
KDM3A-205ENST00000441719 CABP1Q9NZU7 370 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
KDM3A-205ENST00000441719 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
KDM3A-205ENST00000441719 CASKIN1Q8WXD9 1431 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 CNTROBQ8N137 903 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 SMG6Q86US8 1419 aaKnown RBP13□□□□□ -0.33
KDM3A-205ENST00000441719 STAC3Q96MF2 364 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
KDM3A-205ENST00000441719 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
KDM3A-205ENST00000441719 SULT6B1Q6IMI4 303 aa12.99□□□□□ -0.33
KDM3A-205ENST00000441719 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
KDM3A-205ENST00000441719 HOOK1Q9UJC3 728 aaKnown RBP12.99□□□□□ -0.33
KDM3A-205ENST00000441719 MYL6BP14649 208 aa12.99□□□□□ -0.33
KDM3A-205ENST00000441719 TTC39AQ5SRH9 613 aa12.99□□□□□ -0.33
KDM3A-205ENST00000441719 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
KDM3A-205ENST00000441719 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
KDM3A-205ENST00000441719 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
KDM3A-205ENST00000441719 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
KDM3A-205ENST00000441719 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
KDM3A-205ENST00000441719 TWISTNBQ3B726 338 aaPredicted RBP12.98□□□□□ -0.33
KDM3A-205ENST00000441719 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
KDM3A-205ENST00000441719 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
KDM3A-205ENST00000441719 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
KDM3A-205ENST00000441719 NOB1Q9ULX3 412 aaKnown RBP12.98□□□□□ -0.33
KDM3A-205ENST00000441719 CFTRP13569 1480 aa12.98□□□□□ -0.33
KDM3A-205ENST00000441719 CDC45O75419 566 aa12.97□□□□□ -0.33
KDM3A-205ENST00000441719 SF3B2Q13435 895 aaKnown RBP12.97□□□□□ -0.33
KDM3A-205ENST00000441719 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
KDM3A-205ENST00000441719 SIL1Q9H173 461 aa12.97□□□□□ -0.33
KDM3A-205ENST00000441719 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
KDM3A-205ENST00000441719 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
KDM3A-205ENST00000441719 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
KDM3A-205ENST00000441719 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.34
KDM3A-205ENST00000441719 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms