RNA–Protein interactions for RNA: ENST00000441649.1

FAM78B-204, Transcript of family with sequence similarity 78 member B, humanhuman

TSL 5

Gene FAM78B, Length 2,264 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-204ENST00000441649 MSH6P52701 1360 aa18.6■□□□□ 0.57
FAM78B-204ENST00000441649 VGFO15240 615 aaPredicted RBP18.6■□□□□ 0.57
FAM78B-204ENST00000441649 TMF1P82094 1093 aa18.6■□□□□ 0.57
FAM78B-204ENST00000441649 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
FAM78B-204ENST00000441649 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
FAM78B-204ENST00000441649 XRN1Q8IZH2 1706 aaKnown RBP18.6■□□□□ 0.57
FAM78B-204ENST00000441649 PIK3C2GO75747 1445 aa18.59■□□□□ 0.57
FAM78B-204ENST00000441649 NEXMIFQ5QGS0 1516 aa18.58■□□□□ 0.56
FAM78B-204ENST00000441649 C14orf93Q9H972 538 aaKnown RBP18.57■□□□□ 0.56
FAM78B-204ENST00000441649 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
FAM78B-204ENST00000441649 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
FAM78B-204ENST00000441649 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
FAM78B-204ENST00000441649 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
FAM78B-204ENST00000441649 COL16A1Q07092 1604 aaPredicted RBP18.54■□□□□ 0.56
FAM78B-204ENST00000441649 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
FAM78B-204ENST00000441649 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
FAM78B-204ENST00000441649 AMOTL2Q9Y2J4 779 aa18.52■□□□□ 0.56
FAM78B-204ENST00000441649 SETD1AO15047 1707 aaKnown RBP18.52■□□□□ 0.56
FAM78B-204ENST00000441649 METP08581 1390 aa18.51■□□□□ 0.55
FAM78B-204ENST00000441649 C19orf44Q9H6X5 657 aa18.51■□□□□ 0.55
FAM78B-204ENST00000441649 AHDC1Q5TGY3 1603 aaPredicted RBP18.5■□□□□ 0.55
FAM78B-204ENST00000441649 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
FAM78B-204ENST00000441649 DCCP43146 1447 aa18.48■□□□□ 0.55
FAM78B-204ENST00000441649 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
FAM78B-204ENST00000441649 KTN1Q86UP2 1357 aaKnown RBP18.47■□□□□ 0.55
FAM78B-204ENST00000441649 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
FAM78B-204ENST00000441649 JCADQ9P266 1359 aa18.45■□□□□ 0.54
FAM78B-204ENST00000441649 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
FAM78B-204ENST00000441649 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
FAM78B-204ENST00000441649 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
FAM78B-204ENST00000441649 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
FAM78B-204ENST00000441649 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
FAM78B-204ENST00000441649 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
FAM78B-204ENST00000441649 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
FAM78B-204ENST00000441649 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
FAM78B-204ENST00000441649 ATF3P18847 181 aa18.43■□□□□ 0.54
FAM78B-204ENST00000441649 RALBP1Q15311 655 aa18.43■□□□□ 0.54
FAM78B-204ENST00000441649 PANK3Q9H999 370 aa18.43■□□□□ 0.54
FAM78B-204ENST00000441649 MST1RQ04912 1400 aa18.43■□□□□ 0.54
FAM78B-204ENST00000441649 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
FAM78B-204ENST00000441649 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
FAM78B-204ENST00000441649 POTEAQ6S8J7 498 aa18.42■□□□□ 0.54
FAM78B-204ENST00000441649 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
FAM78B-204ENST00000441649 ADGRL3Q9HAR2 1447 aa18.41■□□□□ 0.54
FAM78B-204ENST00000441649 LRP6O75581 1613 aa18.41■□□□□ 0.54
FAM78B-204ENST00000441649 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
FAM78B-204ENST00000441649 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
FAM78B-204ENST00000441649 PTCH1Q13635 1447 aa18.39■□□□□ 0.53
FAM78B-204ENST00000441649 QRICH2Q9H0J4 1663 aa18.38■□□□□ 0.53
FAM78B-204ENST00000441649 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
FAM78B-204ENST00000441649 SPATA31A6Q5VVP1 1343 aa18.36■□□□□ 0.53
FAM78B-204ENST00000441649 PARD3Q8TEW0 1356 aa18.36■□□□□ 0.53
FAM78B-204ENST00000441649 ARHGEF28Q8N1W1 1705 aaKnown RBP18.36■□□□□ 0.53
FAM78B-204ENST00000441649 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
FAM78B-204ENST00000441649 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
FAM78B-204ENST00000441649 MYOM1P52179 1685 aa18.35■□□□□ 0.53
FAM78B-204ENST00000441649 KNSTRNQ9Y448 316 aa18.34■□□□□ 0.53
FAM78B-204ENST00000441649 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
FAM78B-204ENST00000441649 BRD4O60885 1362 aaPredicted RBP18.33■□□□□ 0.53
FAM78B-204ENST00000441649 YTHDC2Q9H6S0 1430 aaKnown RBP18.33■□□□□ 0.53
FAM78B-204ENST00000441649 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
FAM78B-204ENST00000441649 PUS7Q96PZ0 661 aaKnown RBP18.33■□□□□ 0.52
FAM78B-204ENST00000441649 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
FAM78B-204ENST00000441649 STK26Q9P289 416 aa18.32■□□□□ 0.52
FAM78B-204ENST00000441649 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
FAM78B-204ENST00000441649 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
FAM78B-204ENST00000441649 EVC2Q86UK5 1308 aa18.31■□□□□ 0.52
FAM78B-204ENST00000441649 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
FAM78B-204ENST00000441649 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
FAM78B-204ENST00000441649 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
FAM78B-204ENST00000441649 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
FAM78B-204ENST00000441649 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.52
FAM78B-204ENST00000441649 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
FAM78B-204ENST00000441649 POGKQ9P215 609 aa18.27■□□□□ 0.52
FAM78B-204ENST00000441649 TECPR2O15040 1411 aa18.26■□□□□ 0.51
FAM78B-204ENST00000441649 LRPPRCP42704 1394 aaKnown RBP18.26■□□□□ 0.51
FAM78B-204ENST00000441649 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
FAM78B-204ENST00000441649 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
FAM78B-204ENST00000441649 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
FAM78B-204ENST00000441649 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
FAM78B-204ENST00000441649 PNPLA6Q8IY17 1366 aa18.25■□□□□ 0.51
FAM78B-204ENST00000441649 SAFB2Q14151 953 aaKnown RBP eCLIP18.24■□□□□ 0.51
FAM78B-204ENST00000441649 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
FAM78B-204ENST00000441649 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
FAM78B-204ENST00000441649 SOS2Q07890 1332 aaPredicted RBP18.22■□□□□ 0.51
FAM78B-204ENST00000441649 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
FAM78B-204ENST00000441649 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
FAM78B-204ENST00000441649 ZNF772Q68DY9 489 aaPredicted RBP18.21■□□□□ 0.51
FAM78B-204ENST00000441649 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
FAM78B-204ENST00000441649 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
FAM78B-204ENST00000441649 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
FAM78B-204ENST00000441649 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
FAM78B-204ENST00000441649 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
FAM78B-204ENST00000441649 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
FAM78B-204ENST00000441649 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
FAM78B-204ENST00000441649 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
FAM78B-204ENST00000441649 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
FAM78B-204ENST00000441649 CABP2Q9NPB3 220 aa18.19■□□□□ 0.5
FAM78B-204ENST00000441649 SRPK2P78362 688 aaKnown RBP18.19■□□□□ 0.5
FAM78B-204ENST00000441649 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms