RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 C20orf194Q5TEA3 1177 aa15.41■□□□□ 0.06
LTBR-203ENST00000441074 C3P01024 1663 aa15.4■□□□□ 0.06
LTBR-203ENST00000441074 MROH2AA6NES4 1674 aa15.39■□□□□ 0.06
LTBR-203ENST00000441074 TMF1P82094 1093 aa15.39■□□□□ 0.05
LTBR-203ENST00000441074 ARHGAP31Q2M1Z3 1444 aa15.39■□□□□ 0.05
LTBR-203ENST00000441074 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
LTBR-203ENST00000441074 SYNMO15061 1565 aa15.37■□□□□ 0.05
LTBR-203ENST00000441074 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
LTBR-203ENST00000441074 ERVK-7P63135 1459 aa15.35■□□□□ 0.05
LTBR-203ENST00000441074 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
LTBR-203ENST00000441074 PANK3Q9H999 370 aa15.34■□□□□ 0.05
LTBR-203ENST00000441074 SAFB2Q14151 953 aaKnown RBP eCLIP15.34■□□□□ 0.05
LTBR-203ENST00000441074 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.34■□□□□ 0.05
LTBR-203ENST00000441074 TNRQ92752 1358 aa15.34■□□□□ 0.05
LTBR-203ENST00000441074 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.05
LTBR-203ENST00000441074 SLC52A1Q9NWF4 448 aa15.33■□□□□ 0.05
LTBR-203ENST00000441074 PREX1Q8TCU6 1659 aa15.33■□□□□ 0.04
LTBR-203ENST00000441074 CC2D1BQ5T0F9 858 aaKnown RBP15.33■□□□□ 0.04
LTBR-203ENST00000441074 IQGAP1P46940 1657 aa15.32■□□□□ 0.04
LTBR-203ENST00000441074 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
LTBR-203ENST00000441074 STK26Q9P289 416 aa15.32■□□□□ 0.04
LTBR-203ENST00000441074 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
LTBR-203ENST00000441074 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
LTBR-203ENST00000441074 SCAF11Q99590 1463 aaKnown RBP15.32■□□□□ 0.04
LTBR-203ENST00000441074 SPATA31D1Q6ZQQ2 1576 aa15.31■□□□□ 0.04
LTBR-203ENST00000441074 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
LTBR-203ENST00000441074 POGKQ9P215 609 aa15.31■□□□□ 0.04
LTBR-203ENST00000441074 RGS3P49796 1198 aa15.31■□□□□ 0.04
LTBR-203ENST00000441074 KIF1BO60333 1816 aa15.3■□□□□ 0.04
LTBR-203ENST00000441074 SETD1BQ9UPS6 1966 aaKnown RBP15.3■□□□□ 0.04
LTBR-203ENST00000441074 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
LTBR-203ENST00000441074 CDCA8Q53HL2 280 aa15.3■□□□□ 0.04
LTBR-203ENST00000441074 MYOM2P54296 1465 aa15.3■□□□□ 0.04
LTBR-203ENST00000441074 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
LTBR-203ENST00000441074 USP19O94966 1318 aa15.29■□□□□ 0.04
LTBR-203ENST00000441074 BECN1Q14457 450 aa15.28■□□□□ 0.04
LTBR-203ENST00000441074 GLIPR1L2Q4G1C9 344 aa15.28■□□□□ 0.04
LTBR-203ENST00000441074 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
LTBR-203ENST00000441074 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
LTBR-203ENST00000441074 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
LTBR-203ENST00000441074 ZNF521Q96K83 1311 aa15.27■□□□□ 0.04
LTBR-203ENST00000441074 EIF3AQ14152 1382 aaKnown RBP15.27■□□□□ 0.03
LTBR-203ENST00000441074 NPC1L1Q9UHC9 1359 aa15.27■□□□□ 0.03
LTBR-203ENST00000441074 PLEKHH1Q9ULM0 1364 aa15.27■□□□□ 0.03
LTBR-203ENST00000441074 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
LTBR-203ENST00000441074 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
LTBR-203ENST00000441074 KNSTRNQ9Y448 316 aa15.26■□□□□ 0.03
LTBR-203ENST00000441074 VIRMAQ69YN4 1812 aaKnown RBP15.26■□□□□ 0.03
LTBR-203ENST00000441074 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
LTBR-203ENST00000441074 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
LTBR-203ENST00000441074 NEURL4Q96JN8 1562 aa15.24■□□□□ 0.03
LTBR-203ENST00000441074 NEXMIFQ5QGS0 1516 aa15.24■□□□□ 0.03
LTBR-203ENST00000441074 NLRP1Q9C000 1473 aa15.24■□□□□ 0.03
LTBR-203ENST00000441074 PKNOX2Q96KN3 472 aa15.24■□□□□ 0.03
LTBR-203ENST00000441074 KIAA1210Q9ULL0 1709 aa15.24■□□□□ 0.03
LTBR-203ENST00000441074 MYO3AQ8NEV4 1616 aa15.24■□□□□ 0.03
LTBR-203ENST00000441074 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
LTBR-203ENST00000441074 PPP2R1AP30153 589 aa15.23■□□□□ 0.03
LTBR-203ENST00000441074 SLFN5Q08AF3 891 aa15.23■□□□□ 0.03
LTBR-203ENST00000441074 HSPA2P54652 639 aa15.22■□□□□ 0.03
LTBR-203ENST00000441074 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
LTBR-203ENST00000441074 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
LTBR-203ENST00000441074 TRMT2AQ8IZ69 625 aaKnown RBP15.22■□□□□ 0.03
LTBR-203ENST00000441074 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
LTBR-203ENST00000441074 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.03
LTBR-203ENST00000441074 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
LTBR-203ENST00000441074 CEP170BQ9Y4F5 1589 aaPredicted RBP15.21■□□□□ 0.03
LTBR-203ENST00000441074 MYOM1P52179 1685 aa15.21■□□□□ 0.02
LTBR-203ENST00000441074 SLC24A1O60721 1099 aa15.21■□□□□ 0.02
LTBR-203ENST00000441074 THEMISQ8N1K5 641 aaPredicted RBP15.21■□□□□ 0.02
LTBR-203ENST00000441074 TMEM131LA2VDJ0 1609 aa15.21■□□□□ 0.02
LTBR-203ENST00000441074 PPLO60437 1756 aa15.21■□□□□ 0.02
LTBR-203ENST00000441074 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
LTBR-203ENST00000441074 KDM5AP29375 1690 aaKnown RBP15.2■□□□□ 0.02
LTBR-203ENST00000441074 CLCN1P35523 988 aa15.2■□□□□ 0.02
LTBR-203ENST00000441074 SLC12A5Q9H2X9 1139 aa15.2■□□□□ 0.02
LTBR-203ENST00000441074 LMTK3Q96Q04 1460 aa15.19■□□□□ 0.02
LTBR-203ENST00000441074 IGHDP01880 384 aa15.19■□□□□ 0.02
LTBR-203ENST00000441074 SLKQ9H2G2 1235 aaPredicted RBP15.19■□□□□ 0.02
LTBR-203ENST00000441074 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
LTBR-203ENST00000441074 FSD2A1L4K1 749 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 SEC24BO95487 1268 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 XRCC6P12956 609 aaKnown RBP eCLIP15.18■□□□□ 0.02
LTBR-203ENST00000441074 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 CARD14Q9BXL6 1004 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
LTBR-203ENST00000441074 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 GOLGA6L3A6NEY3 463 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
LTBR-203ENST00000441074 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
LTBR-203ENST00000441074 WAPLQ7Z5K2 1190 aa15.17■□□□□ 0.02
LTBR-203ENST00000441074 UBR1Q8IWV7 1749 aa15.17■□□□□ 0.02
LTBR-203ENST00000441074 NKTRP30414 1462 aaKnown RBP15.16■□□□□ 0.02
LTBR-203ENST00000441074 RRP9O43818 475 aaKnown RBP15.16■□□□□ 0.02
LTBR-203ENST00000441074 NAP1L5Q96NT1 182 aaPredicted RBP15.16■□□□□ 0.02
LTBR-203ENST00000441074 CGNL1Q0VF96 1302 aa15.16■□□□□ 0.02
LTBR-203ENST00000441074 ZNF142P52746 1687 aaPredicted RBP15.16■□□□□ 0.02
LTBR-203ENST00000441074 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
LTBR-203ENST00000441074 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
LTBR-203ENST00000441074 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms