RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 CCDC184Q52MB2 194 aa26.14■■□□□ 1.77
SNX17-203ENST00000440760 ANKLE2Q86XL3 938 aa26.12■■□□□ 1.77
SNX17-203ENST00000440760 FAM135BQ49AJ0 1406 aa26.11■■□□□ 1.77
SNX17-203ENST00000440760 TMC1Q8TDI8 760 aa26.11■■□□□ 1.77
SNX17-203ENST00000440760 KDM4FA0A1W2PPD8 638 aa26.11■■□□□ 1.77
SNX17-203ENST00000440760 SRPK2P78362 688 aaKnown RBP26.11■■□□□ 1.77
SNX17-203ENST00000440760 TBX22Q9Y458 520 aa26.11■■□□□ 1.77
SNX17-203ENST00000440760 CC2D1BQ5T0F9 858 aaKnown RBP26.09■■□□□ 1.77
SNX17-203ENST00000440760 SLC12A5Q9H2X9 1139 aa26.09■■□□□ 1.77
SNX17-203ENST00000440760 KTN1Q86UP2 1357 aaKnown RBP26.09■■□□□ 1.77
SNX17-203ENST00000440760 XRN1Q8IZH2 1706 aaKnown RBP26.09■■□□□ 1.77
SNX17-203ENST00000440760 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.07■■□□□ 1.76
SNX17-203ENST00000440760 CDK19Q9BWU1 502 aa26.06■■□□□ 1.76
SNX17-203ENST00000440760 AMOTL2Q9Y2J4 779 aa26.06■■□□□ 1.76
SNX17-203ENST00000440760 KNSTRNQ9Y448 316 aa26.06■■□□□ 1.76
SNX17-203ENST00000440760 PARD3Q8TEW0 1356 aa26.06■■□□□ 1.76
SNX17-203ENST00000440760 CARD14Q9BXL6 1004 aa26.05■■□□□ 1.76
SNX17-203ENST00000440760 PUS7Q96PZ0 661 aaKnown RBP26.04■■□□□ 1.76
SNX17-203ENST00000440760 SIRT1Q96EB6 747 aa26.04■■□□□ 1.76
SNX17-203ENST00000440760 NPHP4O75161 1426 aaPredicted RBP26.03■■□□□ 1.76
SNX17-203ENST00000440760 MRS2Q9HD23 443 aa26.03■■□□□ 1.76
SNX17-203ENST00000440760 AMER1Q5JTC6 1135 aaPredicted RBP26.02■■□□□ 1.76
SNX17-203ENST00000440760 NCKAP5LQ9HCH0 1330 aa26.02■■□□□ 1.76
SNX17-203ENST00000440760 ATAD2Q6PL18 1390 aa26.02■■□□□ 1.76
SNX17-203ENST00000440760 PTCH1Q13635 1447 aa26.02■■□□□ 1.76
SNX17-203ENST00000440760 NSD3Q9BZ95 1437 aa26.02■■□□□ 1.76
SNX17-203ENST00000440760 RALBP1Q15311 655 aa26.01■■□□□ 1.75
SNX17-203ENST00000440760 CHD2O14647 1828 aaKnown RBP26.01■■□□□ 1.75
SNX17-203ENST00000440760 ADGRB2O60241 1585 aa26■■□□□ 1.75
SNX17-203ENST00000440760 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
SNX17-203ENST00000440760 ANKRD36BQ8N2N9 1353 aa25.98■■□□□ 1.75
SNX17-203ENST00000440760 WASLO00401 505 aaPredicted RBP25.98■■□□□ 1.75
SNX17-203ENST00000440760 PIK3R4Q99570 1358 aa25.97■■□□□ 1.75
SNX17-203ENST00000440760 KCNA6P17658 529 aa25.97■■□□□ 1.75
SNX17-203ENST00000440760 A0A1W2PP64 1363 aa25.97■■□□□ 1.75
SNX17-203ENST00000440760 CD163L1Q9NR16 1453 aa25.96■■□□□ 1.75
SNX17-203ENST00000440760 NINLQ9Y2I6 1382 aa25.96■■□□□ 1.75
SNX17-203ENST00000440760 USP32Q8NFA0 1604 aa25.94■■□□□ 1.74
SNX17-203ENST00000440760 HSPA2P54652 639 aa25.94■■□□□ 1.74
SNX17-203ENST00000440760 NPC1L1Q9UHC9 1359 aa25.93■■□□□ 1.74
SNX17-203ENST00000440760 ATP7BP35670 1465 aa25.92■■□□□ 1.74
SNX17-203ENST00000440760 CENPBP07199 599 aaPredicted RBP25.92■■□□□ 1.74
SNX17-203ENST00000440760 CABP1Q9NZU7 370 aa25.91■■□□□ 1.74
SNX17-203ENST00000440760 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
SNX17-203ENST00000440760 FAM9BQ8IZU0 186 aa25.91■■□□□ 1.74
SNX17-203ENST00000440760 BRD4O60885 1362 aaPredicted RBP25.9■■□□□ 1.74
SNX17-203ENST00000440760 PPIP5K1Q6PFW1 1433 aa25.89■■□□□ 1.74
SNX17-203ENST00000440760 PRR36Q9H6K5 1346 aa25.89■■□□□ 1.74
SNX17-203ENST00000440760 NALCNQ8IZF0 1738 aa25.88■■□□□ 1.73
SNX17-203ENST00000440760 NLRP13Q86W25 1043 aa25.88■■□□□ 1.73
SNX17-203ENST00000440760 TOPAZ1Q8N9V7 1692 aa25.88■■□□□ 1.73
SNX17-203ENST00000440760 NUTM2FA1L443 756 aa25.87■■□□□ 1.73
SNX17-203ENST00000440760 NUDT16Q96DE0 195 aaKnown RBP25.87■■□□□ 1.73
SNX17-203ENST00000440760 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
SNX17-203ENST00000440760 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
SNX17-203ENST00000440760 NWD1Q149M9 1564 aa25.85■■□□□ 1.73
SNX17-203ENST00000440760 CDC42BPGQ6DT37 1551 aa25.84■■□□□ 1.73
SNX17-203ENST00000440760 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
SNX17-203ENST00000440760 PPP2R1AP30153 589 aa25.84■■□□□ 1.73
SNX17-203ENST00000440760 ITSN1Q15811 1721 aa25.83■■□□□ 1.73
SNX17-203ENST00000440760 HDGFL2Q7Z4V5 671 aaPredicted RBP25.83■■□□□ 1.73
SNX17-203ENST00000440760 RGPD8O14715 1765 aaPredicted RBP25.83■■□□□ 1.73
SNX17-203ENST00000440760 KIF20BQ96Q89 1820 aa25.82■■□□□ 1.72
SNX17-203ENST00000440760 AKAP12Q02952 1782 aa25.81■■□□□ 1.72
SNX17-203ENST00000440760 NKTRP30414 1462 aaKnown RBP25.8■■□□□ 1.72
SNX17-203ENST00000440760 CCDC61Q9Y6R9 512 aa25.8■■□□□ 1.72
SNX17-203ENST00000440760 MON2Q7Z3U7 1717 aa25.8■■□□□ 1.72
SNX17-203ENST00000440760 FMN2Q9NZ56 1722 aa25.8■■□□□ 1.72
SNX17-203ENST00000440760 STRCQ7RTU9 1775 aa25.79■■□□□ 1.72
SNX17-203ENST00000440760 CPSF1Q10570 1443 aaKnown RBP25.79■■□□□ 1.72
SNX17-203ENST00000440760 PNISRQ8TF01 805 aaKnown RBP25.79■■□□□ 1.72
SNX17-203ENST00000440760 ANKRD26Q9UPS8 1709 aa25.79■■□□□ 1.72
SNX17-203ENST00000440760 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
SNX17-203ENST00000440760 TNNT2P45379 298 aaPredicted RBP25.77■■□□□ 1.72
SNX17-203ENST00000440760 MORC1Q86VD1 984 aa25.77■■□□□ 1.72
SNX17-203ENST00000440760 STRCP1A6NGW2 1772 aa25.77■■□□□ 1.72
SNX17-203ENST00000440760 NSD2O96028 1365 aa25.76■■□□□ 1.71
SNX17-203ENST00000440760 GGNBP2Q9H3C7 697 aa25.75■■□□□ 1.71
SNX17-203ENST00000440760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNX17-203ENST00000440760 ADGRL3Q9HAR2 1447 aa25.74■■□□□ 1.71
SNX17-203ENST00000440760 NRKQ7Z2Y5 1582 aa25.72■■□□□ 1.71
SNX17-203ENST00000440760 EDC4Q6P2E9 1401 aaKnown RBP25.72■■□□□ 1.71
SNX17-203ENST00000440760 FYB1O15117 783 aa25.71■■□□□ 1.71
SNX17-203ENST00000440760 ACEP12821 1306 aa25.69■■□□□ 1.7
SNX17-203ENST00000440760 ANKARQ7Z5J8 1434 aa25.69■■□□□ 1.7
SNX17-203ENST00000440760 SENP3-EIF4A1A0A087X0R7 540 aa25.68■■□□□ 1.7
SNX17-203ENST00000440760 PMFBP1Q8TBY8 1022 aa25.68■■□□□ 1.7
SNX17-203ENST00000440760 C14orf37Q86TY3 774 aa25.67■■□□□ 1.7
SNX17-203ENST00000440760 PLEKHG3A1L390 1219 aa25.67■■□□□ 1.7
SNX17-203ENST00000440760 PROSER2Q86WR7 435 aaPredicted RBP25.66■■□□□ 1.7
SNX17-203ENST00000440760 NME9Q86XW9 330 aa25.65■■□□□ 1.7
SNX17-203ENST00000440760 USP6P35125 1406 aa25.64■■□□□ 1.7
SNX17-203ENST00000440760 ZRANB1Q9UGI0 708 aa25.63■■□□□ 1.69
SNX17-203ENST00000440760 ZNF692Q9BU19 519 aaPredicted RBP25.62■■□□□ 1.69
SNX17-203ENST00000440760 SHPRHQ149N8 1683 aa25.61■■□□□ 1.69
SNX17-203ENST00000440760 POLR3AO14802 1390 aaPredicted RBP25.6■■□□□ 1.69
SNX17-203ENST00000440760 TMEM94Q12767 1356 aa25.6■■□□□ 1.69
SNX17-203ENST00000440760 MTHFSP49914 203 aa25.59■■□□□ 1.69
SNX17-203ENST00000440760 NGDNQ8NEJ9 315 aaKnown RBP25.59■■□□□ 1.69
SNX17-203ENST00000440760 TTC21BQ7Z4L5 1316 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms