RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 MINK1Q8N4C8 1332 aaPredicted RBP29.35■■■□□ 2.29
CDKN1C-204ENST00000440480 FAM135BQ49AJ0 1406 aa29.34■■■□□ 2.29
CDKN1C-204ENST00000440480 PTPRUQ92729 1446 aa29.34■■■□□ 2.29
CDKN1C-204ENST00000440480 PLEKHH1Q9ULM0 1364 aa29.33■■■□□ 2.29
CDKN1C-204ENST00000440480 QRICH2Q9H0J4 1663 aa29.32■■■□□ 2.28
CDKN1C-204ENST00000440480 ROBO2Q9HCK4 1378 aa29.31■■■□□ 2.28
CDKN1C-204ENST00000440480 PUS7Q96PZ0 661 aaKnown RBP29.3■■■□□ 2.28
CDKN1C-204ENST00000440480 SRPK2P78362 688 aaKnown RBP29.27■■■□□ 2.28
CDKN1C-204ENST00000440480 KCNA6P17658 529 aa29.27■■■□□ 2.28
CDKN1C-204ENST00000440480 STRCQ7RTU9 1775 aa29.26■■■□□ 2.27
CDKN1C-204ENST00000440480 CABP2Q9NPB3 220 aa29.26■■■□□ 2.27
CDKN1C-204ENST00000440480 CPS1P31327 1500 aa29.26■■■□□ 2.27
CDKN1C-204ENST00000440480 PANK3Q9H999 370 aa29.25■■■□□ 2.27
CDKN1C-204ENST00000440480 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
CDKN1C-204ENST00000440480 KNDC1Q76NI1 1749 aa29.24■■■□□ 2.27
CDKN1C-204ENST00000440480 PTCH1Q13635 1447 aa29.22■■■□□ 2.27
CDKN1C-204ENST00000440480 TMC1Q8TDI8 760 aa29.22■■■□□ 2.27
CDKN1C-204ENST00000440480 TULP4Q9NRJ4 1543 aa29.21■■■□□ 2.27
CDKN1C-204ENST00000440480 WASLO00401 505 aaPredicted RBP29.2■■■□□ 2.27
CDKN1C-204ENST00000440480 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.26
CDKN1C-204ENST00000440480 PER1O15534 1290 aaPredicted RBP29.17■■■□□ 2.26
CDKN1C-204ENST00000440480 SLC12A5Q9H2X9 1139 aa29.17■■■□□ 2.26
CDKN1C-204ENST00000440480 ATAD2Q6PL18 1390 aa29.15■■■□□ 2.26
CDKN1C-204ENST00000440480 XRN1Q8IZH2 1706 aaKnown RBP29.13■■■□□ 2.25
CDKN1C-204ENST00000440480 KNSTRNQ9Y448 316 aa29.12■■■□□ 2.25
CDKN1C-204ENST00000440480 CNGB1Q14028 1251 aaPredicted RBP29.1■■■□□ 2.25
CDKN1C-204ENST00000440480 CHD2O14647 1828 aaKnown RBP29.1■■■□□ 2.25
CDKN1C-204ENST00000440480 NINLQ9Y2I6 1382 aa29.09■■■□□ 2.25
CDKN1C-204ENST00000440480 NUDT16Q96DE0 195 aaKnown RBP29.07■■■□□ 2.24
CDKN1C-204ENST00000440480 CABP1Q9NZU7 370 aa29.07■■■□□ 2.24
CDKN1C-204ENST00000440480 RBM33Q96EV2 1170 aaKnown RBP29.06■■■□□ 2.24
CDKN1C-204ENST00000440480 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.06■■■□□ 2.24
CDKN1C-204ENST00000440480 PROSER2Q86WR7 435 aaPredicted RBP29.06■■■□□ 2.24
CDKN1C-204ENST00000440480 DMRT2Q9Y5R5 561 aa29.06■■■□□ 2.24
CDKN1C-204ENST00000440480 CCDC61Q9Y6R9 512 aa29.06■■■□□ 2.24
CDKN1C-204ENST00000440480 CARD14Q9BXL6 1004 aa29.05■■■□□ 2.24
CDKN1C-204ENST00000440480 TERF2IPQ9NYB0 399 aa29.04■■■□□ 2.24
CDKN1C-204ENST00000440480 MYOM1P52179 1685 aa29.04■■■□□ 2.24
CDKN1C-204ENST00000440480 C14orf37Q86TY3 774 aa29.02■■■□□ 2.24
CDKN1C-204ENST00000440480 ANKRD36BQ8N2N9 1353 aa29.02■■■□□ 2.24
CDKN1C-204ENST00000440480 ADGRB2O60241 1585 aa29.01■■■□□ 2.24
CDKN1C-204ENST00000440480 NUTM2FA1L443 756 aa29.01■■■□□ 2.23
CDKN1C-204ENST00000440480 MRS2Q9HD23 443 aa29.01■■■□□ 2.23
CDKN1C-204ENST00000440480 KTN1Q86UP2 1357 aaKnown RBP29■■■□□ 2.23
CDKN1C-204ENST00000440480 CC2D1BQ5T0F9 858 aaKnown RBP29■■■□□ 2.23
CDKN1C-204ENST00000440480 HDGFL2Q7Z4V5 671 aaPredicted RBP28.99■■■□□ 2.23
CDKN1C-204ENST00000440480 NWD1Q149M9 1564 aa28.99■■■□□ 2.23
CDKN1C-204ENST00000440480 RALBP1Q15311 655 aa28.99■■■□□ 2.23
CDKN1C-204ENST00000440480 AMER1Q5JTC6 1135 aaPredicted RBP28.98■■■□□ 2.23
CDKN1C-204ENST00000440480 PRR36Q9H6K5 1346 aa28.97■■■□□ 2.23
CDKN1C-204ENST00000440480 NKTRP30414 1462 aaKnown RBP28.97■■■□□ 2.23
CDKN1C-204ENST00000440480 PPIP5K1Q6PFW1 1433 aa28.96■■■□□ 2.23
CDKN1C-204ENST00000440480 A0A1W2PP64 1363 aa28.94■■■□□ 2.22
CDKN1C-204ENST00000440480 HNRNPUQ00839 825 aaKnown RBP eCLIP28.94■■■□□ 2.22
CDKN1C-204ENST00000440480 NSD3Q9BZ95 1437 aa28.94■■■□□ 2.22
CDKN1C-204ENST00000440480 ADGRL3Q9HAR2 1447 aa28.93■■■□□ 2.22
CDKN1C-204ENST00000440480 ZNF335Q9H4Z2 1342 aaPredicted RBP28.93■■■□□ 2.22
CDKN1C-204ENST00000440480 ATP7BP35670 1465 aa28.93■■■□□ 2.22
CDKN1C-204ENST00000440480 STRCP1A6NGW2 1772 aa28.93■■■□□ 2.22
CDKN1C-204ENST00000440480 C19orf44Q9H6X5 657 aa28.92■■■□□ 2.22
CDKN1C-204ENST00000440480 NPC1L1Q9UHC9 1359 aa28.91■■■□□ 2.22
CDKN1C-204ENST00000440480 CGNL1Q0VF96 1302 aa28.91■■■□□ 2.22
CDKN1C-204ENST00000440480 TMEM94Q12767 1356 aa28.9■■■□□ 2.22
CDKN1C-204ENST00000440480 CD163L1Q9NR16 1453 aa28.9■■■□□ 2.22
CDKN1C-204ENST00000440480 PLEKHG3A1L390 1219 aa28.9■■■□□ 2.22
CDKN1C-204ENST00000440480 ZNF692Q9BU19 519 aaPredicted RBP28.9■■■□□ 2.22
CDKN1C-204ENST00000440480 PARD3Q8TEW0 1356 aa28.89■■■□□ 2.21
CDKN1C-204ENST00000440480 CCDC184Q52MB2 194 aa28.87■■■□□ 2.21
CDKN1C-204ENST00000440480 NCOA3Q9Y6Q9 1424 aa28.87■■■□□ 2.21
CDKN1C-204ENST00000440480 ANKARQ7Z5J8 1434 aa28.86■■■□□ 2.21
CDKN1C-204ENST00000440480 CPSF1Q10570 1443 aaKnown RBP28.85■■■□□ 2.21
CDKN1C-204ENST00000440480 MYBBP1AQ9BQG0 1328 aaKnown RBP28.85■■■□□ 2.21
CDKN1C-204ENST00000440480 FAM9BQ8IZU0 186 aa28.85■■■□□ 2.21
CDKN1C-204ENST00000440480 ACEP12821 1306 aa28.84■■■□□ 2.21
CDKN1C-204ENST00000440480 PMFBP1Q8TBY8 1022 aa28.84■■■□□ 2.21
CDKN1C-204ENST00000440480 CDC42BPGQ6DT37 1551 aa28.84■■■□□ 2.21
CDKN1C-204ENST00000440480 NALCNQ8IZF0 1738 aa28.83■■■□□ 2.21
CDKN1C-204ENST00000440480 ATF3P18847 181 aa28.82■■■□□ 2.2
CDKN1C-204ENST00000440480 NGDNQ8NEJ9 315 aaKnown RBP28.82■■■□□ 2.2
CDKN1C-204ENST00000440480 SUPT16HQ9Y5B9 1047 aaKnown RBP28.81■■■□□ 2.2
CDKN1C-204ENST00000440480 MORC1Q86VD1 984 aa28.8■■■□□ 2.2
CDKN1C-204ENST00000440480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.8■■■□□ 2.2
CDKN1C-204ENST00000440480 NEFLP07196 543 aa28.79■■■□□ 2.2
CDKN1C-204ENST00000440480 FYB1O15117 783 aa28.78■■■□□ 2.2
CDKN1C-204ENST00000440480 ESCO1Q5FWF5 840 aa28.78■■■□□ 2.2
CDKN1C-204ENST00000440480 NLRP13Q86W25 1043 aa28.78■■■□□ 2.2
CDKN1C-204ENST00000440480 NSD2O96028 1365 aa28.78■■■□□ 2.2
CDKN1C-204ENST00000440480 USP32Q8NFA0 1604 aa28.78■■■□□ 2.2
CDKN1C-204ENST00000440480 EDC4Q6P2E9 1401 aaKnown RBP28.77■■■□□ 2.2
CDKN1C-204ENST00000440480 BRD4O60885 1362 aaPredicted RBP28.76■■■□□ 2.2
CDKN1C-204ENST00000440480 CADPS2Q86UW7 1296 aa28.76■■■□□ 2.19
CDKN1C-204ENST00000440480 PHF8Q9UPP1 1060 aa28.76■■■□□ 2.19
CDKN1C-204ENST00000440480 FMN2Q9NZ56 1722 aa28.76■■■□□ 2.19
CDKN1C-204ENST00000440480 MSH6P52701 1360 aa28.76■■■□□ 2.19
CDKN1C-204ENST00000440480 GGNBP2Q9H3C7 697 aa28.76■■■□□ 2.19
CDKN1C-204ENST00000440480 ZBED9Q6R2W3 1325 aa28.75■■■□□ 2.19
CDKN1C-204ENST00000440480 POLR3AO14802 1390 aaPredicted RBP28.74■■■□□ 2.19
CDKN1C-204ENST00000440480 LRRC7Q96NW7 1537 aa28.74■■■□□ 2.19
CDKN1C-204ENST00000440480 PPP2R1AP30153 589 aa28.74■■■□□ 2.19
CDKN1C-204ENST00000440480 TOPAZ1Q8N9V7 1692 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms