RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 MED14O60244 1454 aa25.38■■□□□ 1.65
CCNA1-202ENST00000440264 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
CCNA1-202ENST00000440264 ADAMTSL3P82987 1691 aa25.36■■□□□ 1.65
CCNA1-202ENST00000440264 CPS1P31327 1500 aa25.36■■□□□ 1.65
CCNA1-202ENST00000440264 PLEKHG1Q9ULL1 1385 aa25.35■■□□□ 1.65
CCNA1-202ENST00000440264 PLEKHH1Q9ULM0 1364 aa25.34■■□□□ 1.65
CCNA1-202ENST00000440264 LTKP29376 864 aa25.34■■□□□ 1.65
CCNA1-202ENST00000440264 HDGFP51858 240 aaKnown RBP25.34■■□□□ 1.65
CCNA1-202ENST00000440264 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
CCNA1-202ENST00000440264 NSD3Q9BZ95 1437 aa25.34■■□□□ 1.65
CCNA1-202ENST00000440264 ANKRD36BQ8N2N9 1353 aa25.34■■□□□ 1.65
CCNA1-202ENST00000440264 CABP2Q9NPB3 220 aa25.33■■□□□ 1.65
CCNA1-202ENST00000440264 NINLQ9Y2I6 1382 aa25.33■■□□□ 1.65
CCNA1-202ENST00000440264 RIMS1Q86UR5 1692 aaKnown RBP25.33■■□□□ 1.64
CCNA1-202ENST00000440264 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
CCNA1-202ENST00000440264 BLMP54132 1417 aaPredicted RBP25.31■■□□□ 1.64
CCNA1-202ENST00000440264 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
CCNA1-202ENST00000440264 MINK1Q8N4C8 1332 aaPredicted RBP25.31■■□□□ 1.64
CCNA1-202ENST00000440264 SIRT1Q96EB6 747 aa25.3■■□□□ 1.64
CCNA1-202ENST00000440264 POGKQ9P215 609 aa25.3■■□□□ 1.64
CCNA1-202ENST00000440264 ATAD2Q6PL18 1390 aa25.29■■□□□ 1.64
CCNA1-202ENST00000440264 WAPLQ7Z5K2 1190 aa25.28■■□□□ 1.64
CCNA1-202ENST00000440264 CEP170BQ9Y4F5 1589 aaPredicted RBP25.26■■□□□ 1.63
CCNA1-202ENST00000440264 A0A1W2PP64 1363 aa25.26■■□□□ 1.63
CCNA1-202ENST00000440264 SUPT16HQ9Y5B9 1047 aaKnown RBP25.26■■□□□ 1.63
CCNA1-202ENST00000440264 CDK19Q9BWU1 502 aa25.23■■□□□ 1.63
CCNA1-202ENST00000440264 ZNF142P52746 1687 aaPredicted RBP25.23■■□□□ 1.63
CCNA1-202ENST00000440264 SRPK2P78362 688 aaKnown RBP25.22■■□□□ 1.63
CCNA1-202ENST00000440264 TXNDC2Q86VQ3 553 aa25.22■■□□□ 1.63
CCNA1-202ENST00000440264 PTPRUQ92729 1446 aa25.22■■□□□ 1.63
CCNA1-202ENST00000440264 SMG6Q86US8 1419 aaKnown RBP25.21■■□□□ 1.63
CCNA1-202ENST00000440264 NSD2O96028 1365 aa25.2■■□□□ 1.63
CCNA1-202ENST00000440264 ROBO2Q9HCK4 1378 aa25.2■■□□□ 1.63
CCNA1-202ENST00000440264 ADGRB2O60241 1585 aa25.2■■□□□ 1.62
CCNA1-202ENST00000440264 DIP2AQ14689 1571 aa25.2■■□□□ 1.62
CCNA1-202ENST00000440264 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.19■■□□□ 1.62
CCNA1-202ENST00000440264 ANKRD26Q9UPS8 1709 aa25.19■■□□□ 1.62
CCNA1-202ENST00000440264 THEMISQ8N1K5 641 aaPredicted RBP25.18■■□□□ 1.62
CCNA1-202ENST00000440264 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
CCNA1-202ENST00000440264 ATP7BP35670 1465 aa25.17■■□□□ 1.62
CCNA1-202ENST00000440264 POLR3AO14802 1390 aaPredicted RBP25.16■■□□□ 1.62
CCNA1-202ENST00000440264 SHPRHQ149N8 1683 aa25.16■■□□□ 1.62
CCNA1-202ENST00000440264 ADAMTS8Q9UP79 889 aa25.16■■□□□ 1.62
CCNA1-202ENST00000440264 EID1Q9Y6B2 187 aa25.16■■□□□ 1.62
CCNA1-202ENST00000440264 WASLO00401 505 aaPredicted RBP25.15■■□□□ 1.62
CCNA1-202ENST00000440264 TBX22Q9Y458 520 aa25.15■■□□□ 1.62
CCNA1-202ENST00000440264 XRN1Q8IZH2 1706 aaKnown RBP25.13■■□□□ 1.61
CCNA1-202ENST00000440264 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
CCNA1-202ENST00000440264 SETD1BQ9UPS6 1966 aaKnown RBP25.13■■□□□ 1.61
CCNA1-202ENST00000440264 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
CCNA1-202ENST00000440264 MORC1Q86VD1 984 aa25.11■■□□□ 1.61
CCNA1-202ENST00000440264 CABP1Q9NZU7 370 aa25.11■■□□□ 1.61
CCNA1-202ENST00000440264 KIF20BQ96Q89 1820 aa25.11■■□□□ 1.61
CCNA1-202ENST00000440264 SENP3-EIF4A1A0A087X0R7 540 aa25.1■■□□□ 1.61
CCNA1-202ENST00000440264 SLC26A8Q96RN1 970 aa25.1■■□□□ 1.61
CCNA1-202ENST00000440264 TERF2IPQ9NYB0 399 aa25.1■■□□□ 1.61
CCNA1-202ENST00000440264 PTCH1Q13635 1447 aa25.1■■□□□ 1.61
CCNA1-202ENST00000440264 NUDCQ9Y266 331 aa25.1■■□□□ 1.61
CCNA1-202ENST00000440264 TOPAZ1Q8N9V7 1692 aa25.09■■□□□ 1.61
CCNA1-202ENST00000440264 BCANQ96GW7 911 aa25.09■■□□□ 1.61
CCNA1-202ENST00000440264 FKBP8Q14318 412 aa25.08■■□□□ 1.61
CCNA1-202ENST00000440264 CDC42BPGQ6DT37 1551 aa25.08■■□□□ 1.61
CCNA1-202ENST00000440264 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.6
CCNA1-202ENST00000440264 AKAP12Q02952 1782 aa25.07■■□□□ 1.6
CCNA1-202ENST00000440264 FYB1O15117 783 aa25.07■■□□□ 1.6
CCNA1-202ENST00000440264 PRR36Q9H6K5 1346 aa25.06■■□□□ 1.6
CCNA1-202ENST00000440264 PPIP5K1Q6PFW1 1433 aa25.05■■□□□ 1.6
CCNA1-202ENST00000440264 WDR43Q15061 677 aaKnown RBP eCLIP25.04■■□□□ 1.6
CCNA1-202ENST00000440264 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
CCNA1-202ENST00000440264 RNF123Q5XPI4 1314 aa25.03■■□□□ 1.6
CCNA1-202ENST00000440264 NUDT16Q96DE0 195 aaKnown RBP25.03■■□□□ 1.6
CCNA1-202ENST00000440264 AMOTL2Q9Y2J4 779 aa25.03■■□□□ 1.6
CCNA1-202ENST00000440264 PIK3R4Q99570 1358 aa25.02■■□□□ 1.6
CCNA1-202ENST00000440264 PDE3BQ13370 1112 aa25.02■■□□□ 1.6
CCNA1-202ENST00000440264 ZNF521Q96K83 1311 aa25.01■■□□□ 1.59
CCNA1-202ENST00000440264 COL3A1P02461 1466 aaPredicted RBP25■■□□□ 1.59
CCNA1-202ENST00000440264 GGNBP2Q9H3C7 697 aa25■■□□□ 1.59
CCNA1-202ENST00000440264 CCDC61Q9Y6R9 512 aa25■■□□□ 1.59
CCNA1-202ENST00000440264 ITSN1Q15811 1721 aa25■■□□□ 1.59
CCNA1-202ENST00000440264 EDC4Q6P2E9 1401 aaKnown RBP24.99■■□□□ 1.59
CCNA1-202ENST00000440264 NEFLP07196 543 aa24.99■■□□□ 1.59
CCNA1-202ENST00000440264 TNNT2P45379 298 aaPredicted RBP24.99■■□□□ 1.59
CCNA1-202ENST00000440264 MTHFSP49914 203 aa24.99■■□□□ 1.59
CCNA1-202ENST00000440264 NCKAP5LQ9HCH0 1330 aa24.99■■□□□ 1.59
CCNA1-202ENST00000440264 CHD2O14647 1828 aaKnown RBP24.99■■□□□ 1.59
CCNA1-202ENST00000440264 NRKQ7Z2Y5 1582 aa24.98■■□□□ 1.59
CCNA1-202ENST00000440264 NKTRP30414 1462 aaKnown RBP24.95■■□□□ 1.59
CCNA1-202ENST00000440264 SALL2Q9Y467 1007 aaPredicted RBP24.95■■□□□ 1.58
CCNA1-202ENST00000440264 CDCA7LQ96GN5 454 aa24.94■■□□□ 1.58
CCNA1-202ENST00000440264 ANKLE2Q86XL3 938 aa24.93■■□□□ 1.58
CCNA1-202ENST00000440264 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
CCNA1-202ENST00000440264 IQSEC2Q5JU85 1478 aa24.92■■□□□ 1.58
CCNA1-202ENST00000440264 PLEKHG3A1L390 1219 aa24.91■■□□□ 1.58
CCNA1-202ENST00000440264 CCDC146Q8IYE0 955 aa24.9■■□□□ 1.58
CCNA1-202ENST00000440264 KCNA6P17658 529 aa24.9■■□□□ 1.58
CCNA1-202ENST00000440264 RGPD8O14715 1765 aaPredicted RBP24.89■■□□□ 1.57
CCNA1-202ENST00000440264 ERICH6BQ5W0A0 696 aa24.88■■□□□ 1.57
CCNA1-202ENST00000440264 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
CCNA1-202ENST00000440264 FMN2Q9NZ56 1722 aa24.87■■□□□ 1.57
CCNA1-202ENST00000440264 APAF1O14727 1248 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms