RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
SMAD3-202ENST00000439724 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
SMAD3-202ENST00000439724 TMEM2Q9UHN6 1383 aa15.77■□□□□ 0.11
SMAD3-202ENST00000439724 NSD2O96028 1365 aa15.76■□□□□ 0.11
SMAD3-202ENST00000439724 POGKQ9P215 609 aa15.76■□□□□ 0.11
SMAD3-202ENST00000439724 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-202ENST00000439724 ERICH6BQ5W0A0 696 aa15.75■□□□□ 0.11
SMAD3-202ENST00000439724 TECPR2O15040 1411 aa15.75■□□□□ 0.11
SMAD3-202ENST00000439724 PDE3BQ13370 1112 aa15.74■□□□□ 0.11
SMAD3-202ENST00000439724 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMAD3-202ENST00000439724 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-202ENST00000439724 CABP2Q9NPB3 220 aa15.74■□□□□ 0.11
SMAD3-202ENST00000439724 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
SMAD3-202ENST00000439724 MINK1Q8N4C8 1332 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-202ENST00000439724 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
SMAD3-202ENST00000439724 CPS1P31327 1500 aa15.73■□□□□ 0.11
SMAD3-202ENST00000439724 POLR3AO14802 1390 aaPredicted RBP15.73■□□□□ 0.11
SMAD3-202ENST00000439724 WDR43Q15061 677 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMAD3-202ENST00000439724 FAM135BQ49AJ0 1406 aa15.72■□□□□ 0.11
SMAD3-202ENST00000439724 ANKRD26Q9UPS8 1709 aa15.72■□□□□ 0.11
SMAD3-202ENST00000439724 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
SMAD3-202ENST00000439724 ADAMTS8Q9UP79 889 aa15.72■□□□□ 0.11
SMAD3-202ENST00000439724 METP08581 1390 aa15.71■□□□□ 0.11
SMAD3-202ENST00000439724 SLIT1O75093 1534 aa15.71■□□□□ 0.11
SMAD3-202ENST00000439724 SIRT1Q96EB6 747 aa15.71■□□□□ 0.11
SMAD3-202ENST00000439724 BCANQ96GW7 911 aa15.71■□□□□ 0.11
SMAD3-202ENST00000439724 A0A1W2PP64 1363 aa15.71■□□□□ 0.1
SMAD3-202ENST00000439724 PLEKHG1Q9ULL1 1385 aa15.71■□□□□ 0.1
SMAD3-202ENST00000439724 CD163L1Q9NR16 1453 aa15.7■□□□□ 0.1
SMAD3-202ENST00000439724 ARHGAP23Q9P227 1491 aa15.7■□□□□ 0.1
SMAD3-202ENST00000439724 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
SMAD3-202ENST00000439724 ADAMTS13Q76LX8 1427 aa15.7■□□□□ 0.1
SMAD3-202ENST00000439724 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
SMAD3-202ENST00000439724 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
SMAD3-202ENST00000439724 MED14O60244 1454 aa15.69■□□□□ 0.1
SMAD3-202ENST00000439724 SHPRHQ149N8 1683 aa15.69■□□□□ 0.1
SMAD3-202ENST00000439724 CDK19Q9BWU1 502 aa15.68■□□□□ 0.1
SMAD3-202ENST00000439724 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
SMAD3-202ENST00000439724 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
SMAD3-202ENST00000439724 TERF2IPQ9NYB0 399 aa15.68■□□□□ 0.1
SMAD3-202ENST00000439724 ATP7BP35670 1465 aa15.68■□□□□ 0.1
SMAD3-202ENST00000439724 KIF20BQ96Q89 1820 aa15.66■□□□□ 0.1
SMAD3-202ENST00000439724 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
SMAD3-202ENST00000439724 ADGRB2O60241 1585 aa15.65■□□□□ 0.1
SMAD3-202ENST00000439724 IRX6P78412 446 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-202ENST00000439724 DIP2AQ14689 1571 aa15.64■□□□□ 0.09
SMAD3-202ENST00000439724 LTKP29376 864 aa15.63■□□□□ 0.09
SMAD3-202ENST00000439724 HDGFL2Q7Z4V5 671 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-202ENST00000439724 SALL2Q9Y467 1007 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-202ENST00000439724 RIMS1Q86UR5 1692 aaKnown RBP15.62■□□□□ 0.09
SMAD3-202ENST00000439724 ZNF521Q96K83 1311 aa15.62■□□□□ 0.09
SMAD3-202ENST00000439724 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-202ENST00000439724 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
SMAD3-202ENST00000439724 NGEFQ8N5V2 710 aa15.62■□□□□ 0.09
SMAD3-202ENST00000439724 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
SMAD3-202ENST00000439724 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
SMAD3-202ENST00000439724 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
SMAD3-202ENST00000439724 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
SMAD3-202ENST00000439724 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
SMAD3-202ENST00000439724 CABP1Q9NZU7 370 aa15.6■□□□□ 0.09
SMAD3-202ENST00000439724 CDC42BPGQ6DT37 1551 aa15.6■□□□□ 0.09
SMAD3-202ENST00000439724 ADAMTSL3P82987 1691 aa15.6■□□□□ 0.09
SMAD3-202ENST00000439724 ROBO2Q9HCK4 1378 aa15.6■□□□□ 0.09
SMAD3-202ENST00000439724 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
SMAD3-202ENST00000439724 MTHFSP49914 203 aa15.59■□□□□ 0.09
SMAD3-202ENST00000439724 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-202ENST00000439724 MON2Q7Z3U7 1717 aa15.59■□□□□ 0.09
SMAD3-202ENST00000439724 ZNF142P52746 1687 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-202ENST00000439724 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-202ENST00000439724 AKAP12Q02952 1782 aa15.58■□□□□ 0.09
SMAD3-202ENST00000439724 FYB1O15117 783 aa15.58■□□□□ 0.09
SMAD3-202ENST00000439724 TNNT2P45379 298 aaPredicted RBP15.58■□□□□ 0.09
SMAD3-202ENST00000439724 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.09
SMAD3-202ENST00000439724 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
SMAD3-202ENST00000439724 PTPRUQ92729 1446 aa15.57■□□□□ 0.08
SMAD3-202ENST00000439724 TOPAZ1Q8N9V7 1692 aa15.57■□□□□ 0.08
SMAD3-202ENST00000439724 ITSN1Q15811 1721 aa15.57■□□□□ 0.08
SMAD3-202ENST00000439724 TBX22Q9Y458 520 aa15.57■□□□□ 0.08
SMAD3-202ENST00000439724 PTCH1Q13635 1447 aa15.57■□□□□ 0.08
SMAD3-202ENST00000439724 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
SMAD3-202ENST00000439724 COL3A1P02461 1466 aaPredicted RBP15.57■□□□□ 0.08
SMAD3-202ENST00000439724 IQSEC2Q5JU85 1478 aa15.57■□□□□ 0.08
SMAD3-202ENST00000439724 XRN1Q8IZH2 1706 aaKnown RBP15.56■□□□□ 0.08
SMAD3-202ENST00000439724 CCDC146Q8IYE0 955 aa15.56■□□□□ 0.08
SMAD3-202ENST00000439724 GGNBP2Q9H3C7 697 aa15.56■□□□□ 0.08
SMAD3-202ENST00000439724 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
SMAD3-202ENST00000439724 APAF1O14727 1248 aa15.55■□□□□ 0.08
SMAD3-202ENST00000439724 RRP1P56182 461 aaKnown RBP15.55■□□□□ 0.08
SMAD3-202ENST00000439724 GOLGA2Q08379 1002 aa15.55■□□□□ 0.08
SMAD3-202ENST00000439724 NUDT16Q96DE0 195 aaKnown RBP15.54■□□□□ 0.08
SMAD3-202ENST00000439724 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
SMAD3-202ENST00000439724 CCDC61Q9Y6R9 512 aa15.53■□□□□ 0.08
SMAD3-202ENST00000439724 DUSP27Q5VZP5 1158 aa15.53■□□□□ 0.08
SMAD3-202ENST00000439724 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
SMAD3-202ENST00000439724 SLFN5Q08AF3 891 aa15.52■□□□□ 0.07
SMAD3-202ENST00000439724 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.07
SMAD3-202ENST00000439724 TRMT2AQ8IZ69 625 aaKnown RBP15.52■□□□□ 0.07
SMAD3-202ENST00000439724 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.07
SMAD3-202ENST00000439724 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
SMAD3-202ENST00000439724 PIK3R4Q99570 1358 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms