RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 AXIN1O15169 862 aa10.72□□□□□ -0.69
CHEK2-217ENST00000439346 AVPP01185 164 aa10.72□□□□□ -0.69
CHEK2-217ENST00000439346 GUCA2AQ02747 115 aa10.71□□□□□ -0.69
CHEK2-217ENST00000439346 TRIM32Q13049 653 aa10.7□□□□□ -0.7
CHEK2-217ENST00000439346 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
CHEK2-217ENST00000439346 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
CHEK2-217ENST00000439346 CRIPAKQ8N1N5 446 aa10.7□□□□□ -0.7
CHEK2-217ENST00000439346 KDM4AO75164 1064 aa10.69□□□□□ -0.7
CHEK2-217ENST00000439346 SMPD1P17405 629 aa10.69□□□□□ -0.7
CHEK2-217ENST00000439346 LCE2AQ5TA79 106 aaPredicted RBP10.69□□□□□ -0.7
CHEK2-217ENST00000439346 J3QL48 77 aa10.68□□□□□ -0.7
CHEK2-217ENST00000439346 IRF6O14896 467 aa10.68□□□□□ -0.7
CHEK2-217ENST00000439346 MMP16P51512 607 aa10.68□□□□□ -0.7
CHEK2-217ENST00000439346 TREML4Q6UXN2 200 aa10.68□□□□□ -0.7
CHEK2-217ENST00000439346 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
CHEK2-217ENST00000439346 SYMPKQ92797 1274 aaKnown RBP10.68□□□□□ -0.7
CHEK2-217ENST00000439346 MRGPRX2Q96LB1 330 aa10.68□□□□□ -0.7
CHEK2-217ENST00000439346 USB1Q9BQ65 265 aaKnown RBP10.68□□□□□ -0.7
CHEK2-217ENST00000439346 WNT7AO00755 349 aa10.67□□□□□ -0.7
CHEK2-217ENST00000439346 Q3C1V9 767 aa10.67□□□□□ -0.7
CHEK2-217ENST00000439346 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
CHEK2-217ENST00000439346 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
CHEK2-217ENST00000439346 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
CHEK2-217ENST00000439346 HOXA2O43364 376 aa10.64□□□□□ -0.71
CHEK2-217ENST00000439346 SKOR1P84550 965 aa10.64□□□□□ -0.71
CHEK2-217ENST00000439346 SNIP1Q8TAD8 396 aaKnown RBP10.64□□□□□ -0.71
CHEK2-217ENST00000439346 SMCPP49901 116 aaPredicted RBP10.62□□□□□ -0.71
CHEK2-217ENST00000439346 CTC1Q2NKJ3 1217 aa10.62□□□□□ -0.71
CHEK2-217ENST00000439346 HPS1Q92902 700 aa10.62□□□□□ -0.71
CHEK2-217ENST00000439346 SNRPBP14678 240 aaKnown RBP10.61□□□□□ -0.71
CHEK2-217ENST00000439346 RC3H1Q5TC82 1133 aaKnown RBP10.6□□□□□ -0.71
CHEK2-217ENST00000439346 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
CHEK2-217ENST00000439346 MINK1Q8N4C8 1332 aaPredicted RBP10.59□□□□□ -0.71
CHEK2-217ENST00000439346 WFS1O76024 890 aa10.58□□□□□ -0.72
CHEK2-217ENST00000439346 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
CHEK2-217ENST00000439346 USP46P62068 366 aa10.57□□□□□ -0.72
CHEK2-217ENST00000439346 LCE2CQ5TA81 110 aa10.57□□□□□ -0.72
CHEK2-217ENST00000439346 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
CHEK2-217ENST00000439346 FAM217BQ9NTX9 383 aaPredicted RBP10.57□□□□□ -0.72
CHEK2-217ENST00000439346 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
CHEK2-217ENST00000439346 GPCPD1Q9NPB8 672 aa10.56□□□□□ -0.72
CHEK2-217ENST00000439346 JUNDP17535 347 aa10.55□□□□□ -0.72
CHEK2-217ENST00000439346 PCDHGC3Q9UN70 934 aa10.55□□□□□ -0.72
CHEK2-217ENST00000439346 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
CHEK2-217ENST00000439346 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
CHEK2-217ENST00000439346 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
CHEK2-217ENST00000439346 CLCN1P35523 988 aa10.52□□□□□ -0.73
CHEK2-217ENST00000439346 TRIM47Q96LD4 638 aa10.51□□□□□ -0.73
CHEK2-217ENST00000439346 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
CHEK2-217ENST00000439346 NDUFV2P19404 249 aa10.5□□□□□ -0.73
CHEK2-217ENST00000439346 WNT7BP56706 349 aa10.5□□□□□ -0.73
CHEK2-217ENST00000439346 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
CHEK2-217ENST00000439346 C6orf229H3BNL8 230 aa10.49□□□□□ -0.73
CHEK2-217ENST00000439346 FDX1P10109 184 aa10.49□□□□□ -0.73
CHEK2-217ENST00000439346 RETREG3Q86VR2 466 aa10.49□□□□□ -0.73
CHEK2-217ENST00000439346 BMP1P13497 986 aa10.48□□□□□ -0.73
CHEK2-217ENST00000439346 SIAH2O43255 324 aa10.47□□□□□ -0.73
CHEK2-217ENST00000439346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHEK2-217ENST00000439346 EHBP1Q8NDI1 1231 aa10.47□□□□□ -0.73
CHEK2-217ENST00000439346 TERTO14746 1132 aaKnown RBP10.46□□□□□ -0.73
CHEK2-217ENST00000439346 SSTR3P32745 418 aaPredicted RBP10.46□□□□□ -0.73
CHEK2-217ENST00000439346 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
CHEK2-217ENST00000439346 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.73
CHEK2-217ENST00000439346 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
CHEK2-217ENST00000439346 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
CHEK2-217ENST00000439346 SH3BP2P78314 561 aa10.45□□□□□ -0.74
CHEK2-217ENST00000439346 SENP2Q9HC62 589 aa10.45□□□□□ -0.74
CHEK2-217ENST00000439346 MS4A1P11836 297 aa10.44□□□□□ -0.74
CHEK2-217ENST00000439346 TRIM46Q7Z4K8 759 aa10.43□□□□□ -0.74
CHEK2-217ENST00000439346 CCNYL3P0C7X3 344 aa10.42□□□□□ -0.74
CHEK2-217ENST00000439346 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
CHEK2-217ENST00000439346 BAP1Q92560 729 aa10.42□□□□□ -0.74
CHEK2-217ENST00000439346 TLL2Q9Y6L7 1015 aa10.42□□□□□ -0.74
CHEK2-217ENST00000439346 WIPF1O43516 503 aa10.41□□□□□ -0.74
CHEK2-217ENST00000439346 UNC93B1Q9H1C4 597 aa10.41□□□□□ -0.74
CHEK2-217ENST00000439346 WASF2Q9Y6W5 498 aa10.41□□□□□ -0.74
CHEK2-217ENST00000439346 VEGFBP49765 207 aa10.4□□□□□ -0.74
CHEK2-217ENST00000439346 PRR7Q8TB68 274 aa10.4□□□□□ -0.74
CHEK2-217ENST00000439346 CAPN5O15484 640 aaPredicted RBP10.39□□□□□ -0.75
CHEK2-217ENST00000439346 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
CHEK2-217ENST00000439346 PTPRNQ16849 979 aa10.37□□□□□ -0.75
CHEK2-217ENST00000439346 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
CHEK2-217ENST00000439346 EVA1BQ9NVM1 165 aa10.37□□□□□ -0.75
CHEK2-217ENST00000439346 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
CHEK2-217ENST00000439346 KCNH2Q12809 1159 aa10.35□□□□□ -0.75
CHEK2-217ENST00000439346 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
CHEK2-217ENST00000439346 ZMYND10O75800 440 aa10.34□□□□□ -0.75
CHEK2-217ENST00000439346 INSM1Q01101 510 aaPredicted RBP10.34□□□□□ -0.75
CHEK2-217ENST00000439346 MTMR2Q13614 643 aa10.34□□□□□ -0.75
CHEK2-217ENST00000439346 ZNF511Q8NB15 262 aa10.34□□□□□ -0.75
CHEK2-217ENST00000439346 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
CHEK2-217ENST00000439346 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
CHEK2-217ENST00000439346 AMHR2Q16671 573 aa10.33□□□□□ -0.76
CHEK2-217ENST00000439346 GMPRP36959 345 aa10.32□□□□□ -0.76
CHEK2-217ENST00000439346 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
CHEK2-217ENST00000439346 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
CHEK2-217ENST00000439346 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
CHEK2-217ENST00000439346 NXF1Q9UBU9 619 aaKnown RBP10.32□□□□□ -0.76
CHEK2-217ENST00000439346 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
CHEK2-217ENST00000439346 CFAP99D6REC4 459 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms