RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
APP-208ENST00000439274 WWC1Q8IX03 1113 aa19.94■□□□□ 0.78
APP-208ENST00000439274 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
APP-208ENST00000439274 NSD3Q9BZ95 1437 aa19.94■□□□□ 0.78
APP-208ENST00000439274 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
APP-208ENST00000439274 PANK1Q8TE04 598 aa19.93■□□□□ 0.78
APP-208ENST00000439274 NRXN1Q9ULB1 1477 aa19.93■□□□□ 0.78
APP-208ENST00000439274 POLR3AO14802 1390 aaPredicted RBP19.92■□□□□ 0.78
APP-208ENST00000439274 MORC1Q86VD1 984 aa19.92■□□□□ 0.78
APP-208ENST00000439274 DAXXQ9UER7 740 aaPredicted RBP19.92■□□□□ 0.78
APP-208ENST00000439274 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
APP-208ENST00000439274 COG6Q9Y2V7 657 aa19.91■□□□□ 0.78
APP-208ENST00000439274 MYO3AQ8NEV4 1616 aa19.91■□□□□ 0.78
APP-208ENST00000439274 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
APP-208ENST00000439274 SBNO2Q9Y2G9 1366 aa19.9■□□□□ 0.78
APP-208ENST00000439274 YEATS2Q9ULM3 1422 aa19.9■□□□□ 0.78
APP-208ENST00000439274 NFKBIBQ15653 356 aa19.9■□□□□ 0.78
APP-208ENST00000439274 FRAT1Q92837 279 aaPredicted RBP19.89■□□□□ 0.77
APP-208ENST00000439274 CFAP65Q6ZU64 1925 aaKnown RBP19.89■□□□□ 0.77
APP-208ENST00000439274 ADGRB3O60242 1522 aa19.88■□□□□ 0.77
APP-208ENST00000439274 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
APP-208ENST00000439274 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
APP-208ENST00000439274 IL27Q8NEV9 243 aa19.87■□□□□ 0.77
APP-208ENST00000439274 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
APP-208ENST00000439274 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
APP-208ENST00000439274 CGNL1Q0VF96 1302 aa19.87■□□□□ 0.77
APP-208ENST00000439274 CLUAP1Q96AJ1 413 aa19.86■□□□□ 0.77
APP-208ENST00000439274 GGT6Q6P531 493 aa19.86■□□□□ 0.77
APP-208ENST00000439274 TCP11L2Q8N4U5 519 aa19.86■□□□□ 0.77
APP-208ENST00000439274 TNNQ9UQP3 1299 aa19.85■□□□□ 0.77
APP-208ENST00000439274 RUNDC1Q96C34 613 aa19.85■□□□□ 0.77
APP-208ENST00000439274 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
APP-208ENST00000439274 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
APP-208ENST00000439274 NUTM2DQ5VT03 806 aaPredicted RBP19.84■□□□□ 0.77
APP-208ENST00000439274 NPATQ14207 1427 aa19.84■□□□□ 0.77
APP-208ENST00000439274 SETBP1Q9Y6X0 1596 aa19.84■□□□□ 0.77
APP-208ENST00000439274 MTHFSP49914 203 aa19.83■□□□□ 0.77
APP-208ENST00000439274 BCL2L13Q9BXK5 485 aa19.83■□□□□ 0.77
APP-208ENST00000439274 RARSP54136 660 aaKnown RBP19.82■□□□□ 0.76
APP-208ENST00000439274 ZC3H13Q5T200 1668 aaKnown RBP19.82■□□□□ 0.76
APP-208ENST00000439274 ADGRB1O14514 1584 aa19.82■□□□□ 0.76
APP-208ENST00000439274 SEC24BO95487 1268 aa19.81■□□□□ 0.76
APP-208ENST00000439274 ABCC3O15438 1527 aa19.81■□□□□ 0.76
APP-208ENST00000439274 IQSEC2Q5JU85 1478 aa19.81■□□□□ 0.76
APP-208ENST00000439274 RLBP1P12271 317 aa19.81■□□□□ 0.76
APP-208ENST00000439274 PPLO60437 1756 aa19.81■□□□□ 0.76
APP-208ENST00000439274 USP19O94966 1318 aa19.81■□□□□ 0.76
APP-208ENST00000439274 NINLQ9Y2I6 1382 aa19.8■□□□□ 0.76
APP-208ENST00000439274 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
APP-208ENST00000439274 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
APP-208ENST00000439274 RTN4Q9NQC3 1192 aaKnown RBP19.79■□□□□ 0.76
APP-208ENST00000439274 GSE1Q14687 1217 aa19.78■□□□□ 0.76
APP-208ENST00000439274 CAMSAP1Q5T5Y3 1602 aa19.78■□□□□ 0.76
APP-208ENST00000439274 PCDHB15Q9Y5E8 787 aa19.78■□□□□ 0.76
APP-208ENST00000439274 SIGLEC1Q9BZZ2 1709 aa19.77■□□□□ 0.76
APP-208ENST00000439274 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.76
APP-208ENST00000439274 MAPK8IP3Q9UPT6 1336 aa19.76■□□□□ 0.75
APP-208ENST00000439274 VIRMAQ69YN4 1812 aaKnown RBP19.76■□□□□ 0.75
APP-208ENST00000439274 SAFB2Q14151 953 aaKnown RBP eCLIP19.75■□□□□ 0.75
APP-208ENST00000439274 WDR63Q8IWG1 891 aa19.75■□□□□ 0.75
APP-208ENST00000439274 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
APP-208ENST00000439274 CABP2Q9NPB3 220 aa19.75■□□□□ 0.75
APP-208ENST00000439274 U2AF1L5P0DN76 240 aaPredicted RBP19.74■□□□□ 0.75
APP-208ENST00000439274 U2AF1Q01081 240 aaKnown RBP eCLIP19.74■□□□□ 0.75
APP-208ENST00000439274 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
APP-208ENST00000439274 REREQ9P2R6 1566 aa19.72■□□□□ 0.75
APP-208ENST00000439274 USP32Q8NFA0 1604 aa19.72■□□□□ 0.75
APP-208ENST00000439274 EVC2Q86UK5 1308 aa19.72■□□□□ 0.75
APP-208ENST00000439274 PMFBP1Q8TBY8 1022 aa19.71■□□□□ 0.75
APP-208ENST00000439274 RPGRIP1LQ68CZ1 1315 aa19.71■□□□□ 0.75
APP-208ENST00000439274 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
APP-208ENST00000439274 BRPF3Q9ULD4 1205 aa19.71■□□□□ 0.75
APP-208ENST00000439274 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
APP-208ENST00000439274 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
APP-208ENST00000439274 ARHGEF40Q8TER5 1519 aa19.69■□□□□ 0.74
APP-208ENST00000439274 TSR2Q969E8 191 aaKnown RBP19.69■□□□□ 0.74
APP-208ENST00000439274 NLRP1Q9C000 1473 aa19.69■□□□□ 0.74
APP-208ENST00000439274 MYH16Q9H6N6 1097 aa19.68■□□□□ 0.74
APP-208ENST00000439274 STK26Q9P289 416 aa19.68■□□□□ 0.74
APP-208ENST00000439274 ARHGEF28Q8N1W1 1705 aaKnown RBP19.68■□□□□ 0.74
APP-208ENST00000439274 U2SURPO15042 1029 aaKnown RBP19.66■□□□□ 0.74
APP-208ENST00000439274 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
APP-208ENST00000439274 GGNBP2Q9H3C7 697 aa19.66■□□□□ 0.74
APP-208ENST00000439274 AGLP35573 1532 aa19.66■□□□□ 0.74
APP-208ENST00000439274 PIK3C2BO00750 1634 aa19.65■□□□□ 0.74
APP-208ENST00000439274 NEXMIFQ5QGS0 1516 aa19.65■□□□□ 0.74
APP-208ENST00000439274 SLKQ9H2G2 1235 aaPredicted RBP19.65■□□□□ 0.74
APP-208ENST00000439274 MVPQ14764 893 aaKnown RBP19.64■□□□□ 0.74
APP-208ENST00000439274 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
APP-208ENST00000439274 RWDD1Q9H446 243 aaPredicted RBP19.64■□□□□ 0.73
APP-208ENST00000439274 NSD2O96028 1365 aa19.64■□□□□ 0.73
APP-208ENST00000439274 SRPK2P78362 688 aaKnown RBP19.63■□□□□ 0.73
APP-208ENST00000439274 AAMPQ13685 434 aa19.63■□□□□ 0.73
APP-208ENST00000439274 ARHGAP31Q2M1Z3 1444 aa19.63■□□□□ 0.73
APP-208ENST00000439274 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
APP-208ENST00000439274 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
APP-208ENST00000439274 ZKSCAN2Q63HK3 967 aa19.63■□□□□ 0.73
APP-208ENST00000439274 FTSJ3Q8IY81 847 aaKnown RBP19.63■□□□□ 0.73
APP-208ENST00000439274 PUS7Q96PZ0 661 aaKnown RBP19.62■□□□□ 0.73
APP-208ENST00000439274 IDI1Q13907 227 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms