RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 KCNC4Q03721 635 aa11.78□□□□□ -0.52
LINC00271-203ENST00000438618 CD109Q6YHK3 1445 aa11.77□□□□□ -0.52
LINC00271-203ENST00000438618 ATP10BO94823 1461 aa11.77□□□□□ -0.52
LINC00271-203ENST00000438618 A0A0G2JS52 829 aa11.77□□□□□ -0.53
LINC00271-203ENST00000438618 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
LINC00271-203ENST00000438618 SEMA3EO15041 775 aa11.76□□□□□ -0.53
LINC00271-203ENST00000438618 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
LINC00271-203ENST00000438618 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
LINC00271-203ENST00000438618 PLEKHD1A6NEE1 506 aa11.75□□□□□ -0.53
LINC00271-203ENST00000438618 COL17A1Q9UMD9 1497 aaPredicted RBP11.75□□□□□ -0.53
LINC00271-203ENST00000438618 ATP1B4Q9UN42 357 aaPredicted RBP11.74□□□□□ -0.53
LINC00271-203ENST00000438618 PPRC1Q5VV67 1664 aaKnown RBP11.73□□□□□ -0.53
LINC00271-203ENST00000438618 TTC13Q8NBP0 860 aa11.73□□□□□ -0.53
LINC00271-203ENST00000438618 MAP3K4Q9Y6R4 1608 aa11.73□□□□□ -0.53
LINC00271-203ENST00000438618 FHOD3Q2V2M9 1422 aa11.72□□□□□ -0.53
LINC00271-203ENST00000438618 PTGDRQ13258 359 aa11.72□□□□□ -0.53
LINC00271-203ENST00000438618 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
LINC00271-203ENST00000438618 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
LINC00271-203ENST00000438618 SAMD9Q5K651 1589 aa11.71□□□□□ -0.53
LINC00271-203ENST00000438618 RGS20O76081 388 aa11.71□□□□□ -0.53
LINC00271-203ENST00000438618 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
LINC00271-203ENST00000438618 SLF2Q8IX21 1173 aa11.71□□□□□ -0.53
LINC00271-203ENST00000438618 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
LINC00271-203ENST00000438618 FCHSD2O94868 740 aa11.69□□□□□ -0.54
LINC00271-203ENST00000438618 RBM46Q8TBY0 533 aaKnown RBP11.69□□□□□ -0.54
LINC00271-203ENST00000438618 KIF21BO75037 1637 aa11.68□□□□□ -0.54
LINC00271-203ENST00000438618 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
LINC00271-203ENST00000438618 EYA1Q99502 592 aa11.67□□□□□ -0.54
LINC00271-203ENST00000438618 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
LINC00271-203ENST00000438618 HECW2Q9P2P5 1572 aa11.67□□□□□ -0.54
LINC00271-203ENST00000438618 NUP153P49790 1475 aaKnown RBP11.66□□□□□ -0.54
LINC00271-203ENST00000438618 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
LINC00271-203ENST00000438618 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
LINC00271-203ENST00000438618 DNAJB2P25686 324 aa11.64□□□□□ -0.55
LINC00271-203ENST00000438618 MTRQ99707 1265 aa11.64□□□□□ -0.55
LINC00271-203ENST00000438618 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
LINC00271-203ENST00000438618 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
LINC00271-203ENST00000438618 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
LINC00271-203ENST00000438618 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
LINC00271-203ENST00000438618 APLP1P51693 650 aa11.62□□□□□ -0.55
LINC00271-203ENST00000438618 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
LINC00271-203ENST00000438618 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
LINC00271-203ENST00000438618 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
LINC00271-203ENST00000438618 ARAP3Q8WWN8 1544 aa11.61□□□□□ -0.55
LINC00271-203ENST00000438618 TJAP1Q5JTD0 557 aa11.61□□□□□ -0.55
LINC00271-203ENST00000438618 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
LINC00271-203ENST00000438618 PRR14Q9BWN1 585 aa11.6□□□□□ -0.55
LINC00271-203ENST00000438618 IRX2Q9BZI1 471 aaPredicted RBP11.6□□□□□ -0.55
LINC00271-203ENST00000438618 ABCA9Q8IUA7 1624 aa11.6□□□□□ -0.55
LINC00271-203ENST00000438618 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
LINC00271-203ENST00000438618 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
LINC00271-203ENST00000438618 HIC1Q14526 733 aa11.59□□□□□ -0.55
LINC00271-203ENST00000438618 FBXO41Q8TF61 875 aa11.59□□□□□ -0.55
LINC00271-203ENST00000438618 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
LINC00271-203ENST00000438618 NEO1Q92859 1461 aa11.58□□□□□ -0.56
LINC00271-203ENST00000438618 RCCD1A6NED2 376 aa11.58□□□□□ -0.56
LINC00271-203ENST00000438618 COPS2P61201 443 aa11.58□□□□□ -0.56
LINC00271-203ENST00000438618 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
LINC00271-203ENST00000438618 OATP04181 439 aa11.57□□□□□ -0.56
LINC00271-203ENST00000438618 TMEM134Q9H6X4 195 aa11.57□□□□□ -0.56
LINC00271-203ENST00000438618 AKNAQ7Z591 1439 aa11.57□□□□□ -0.56
LINC00271-203ENST00000438618 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
LINC00271-203ENST00000438618 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
LINC00271-203ENST00000438618 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
LINC00271-203ENST00000438618 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
LINC00271-203ENST00000438618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
LINC00271-203ENST00000438618 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
LINC00271-203ENST00000438618 KMT5BQ4FZB7 885 aa11.54□□□□□ -0.56
LINC00271-203ENST00000438618 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
LINC00271-203ENST00000438618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00271-203ENST00000438618 FANCAO15360 1455 aa11.53□□□□□ -0.56
LINC00271-203ENST00000438618 DENND4BO75064 1496 aaPredicted RBP11.53□□□□□ -0.56
LINC00271-203ENST00000438618 GNPATO15228 680 aa11.53□□□□□ -0.56
LINC00271-203ENST00000438618 PLCH2O75038 1416 aa11.52□□□□□ -0.56
LINC00271-203ENST00000438618 GGCXP38435 758 aa11.51□□□□□ -0.57
LINC00271-203ENST00000438618 RSPH4AQ5TD94 716 aa11.51□□□□□ -0.57
LINC00271-203ENST00000438618 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
LINC00271-203ENST00000438618 CFHP08603 1231 aa11.5□□□□□ -0.57
LINC00271-203ENST00000438618 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
LINC00271-203ENST00000438618 PXYLP1Q8TE99 480 aa11.5□□□□□ -0.57
LINC00271-203ENST00000438618 SCAPERQ9BY12 1400 aa11.5□□□□□ -0.57
LINC00271-203ENST00000438618 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
LINC00271-203ENST00000438618 CLIP1P30622 1438 aa11.49□□□□□ -0.57
LINC00271-203ENST00000438618 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
LINC00271-203ENST00000438618 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
LINC00271-203ENST00000438618 ZPR1O75312 459 aa11.48□□□□□ -0.57
LINC00271-203ENST00000438618 MLECQ14165 292 aa11.48□□□□□ -0.57
LINC00271-203ENST00000438618 METTL3Q86U44 580 aaKnown RBP11.48□□□□□ -0.57
LINC00271-203ENST00000438618 AFAP1Q8N556 730 aa11.48□□□□□ -0.57
LINC00271-203ENST00000438618 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
LINC00271-203ENST00000438618 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.48□□□□□ -0.57
LINC00271-203ENST00000438618 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
LINC00271-203ENST00000438618 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
LINC00271-203ENST00000438618 FECHP22830 423 aa11.47□□□□□ -0.57
LINC00271-203ENST00000438618 BLOC1S3Q6QNY0 202 aa11.47□□□□□ -0.57
LINC00271-203ENST00000438618 CFAP74Q9C0B2 1584 aa11.45□□□□□ -0.58
LINC00271-203ENST00000438618 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
LINC00271-203ENST00000438618 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
LINC00271-203ENST00000438618 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
LINC00271-203ENST00000438618 RDH13Q8NBN7 331 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms