RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
CUBN-204ENST00000438254 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
CUBN-204ENST00000438254 USP47Q96K76 1375 aa13.75□□□□□ -0.21
CUBN-204ENST00000438254 HDGFP51858 240 aaKnown RBP13.75□□□□□ -0.21
CUBN-204ENST00000438254 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
CUBN-204ENST00000438254 HSPA5P11021 654 aaKnown RBP13.74□□□□□ -0.21
CUBN-204ENST00000438254 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
CUBN-204ENST00000438254 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
CUBN-204ENST00000438254 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
CUBN-204ENST00000438254 TXNDC2Q86VQ3 553 aa13.73□□□□□ -0.21
CUBN-204ENST00000438254 DIP2AQ14689 1571 aa13.71□□□□□ -0.21
CUBN-204ENST00000438254 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
CUBN-204ENST00000438254 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
CUBN-204ENST00000438254 METP08581 1390 aa13.7□□□□□ -0.22
CUBN-204ENST00000438254 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
CUBN-204ENST00000438254 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
CUBN-204ENST00000438254 TECPR2O15040 1411 aa13.69□□□□□ -0.22
CUBN-204ENST00000438254 ARHGEF28Q8N1W1 1705 aaKnown RBP13.69□□□□□ -0.22
CUBN-204ENST00000438254 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
CUBN-204ENST00000438254 KNDC1Q76NI1 1749 aa13.68□□□□□ -0.22
CUBN-204ENST00000438254 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
CUBN-204ENST00000438254 POTEIP0CG38 1075 aa13.68□□□□□ -0.22
CUBN-204ENST00000438254 TESK2Q96S53 571 aa13.68□□□□□ -0.22
CUBN-204ENST00000438254 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
CUBN-204ENST00000438254 TBX22Q9Y458 520 aa13.68□□□□□ -0.22
CUBN-204ENST00000438254 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
CUBN-204ENST00000438254 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
CUBN-204ENST00000438254 ABCC11Q96J66 1382 aa13.67□□□□□ -0.22
CUBN-204ENST00000438254 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
CUBN-204ENST00000438254 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
CUBN-204ENST00000438254 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
CUBN-204ENST00000438254 CPS1P31327 1500 aa13.65□□□□□ -0.22
CUBN-204ENST00000438254 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
CUBN-204ENST00000438254 PIK3R4Q99570 1358 aa13.65□□□□□ -0.22
CUBN-204ENST00000438254 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
CUBN-204ENST00000438254 STRCQ7RTU9 1775 aa13.64□□□□□ -0.23
CUBN-204ENST00000438254 EIF3AQ14152 1382 aaKnown RBP13.64□□□□□ -0.23
CUBN-204ENST00000438254 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
CUBN-204ENST00000438254 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
CUBN-204ENST00000438254 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
CUBN-204ENST00000438254 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
CUBN-204ENST00000438254 HSPA2P54652 639 aa13.62□□□□□ -0.23
CUBN-204ENST00000438254 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
CUBN-204ENST00000438254 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
CUBN-204ENST00000438254 QRICH2Q9H0J4 1663 aa13.62□□□□□ -0.23
CUBN-204ENST00000438254 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
CUBN-204ENST00000438254 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
CUBN-204ENST00000438254 CCDC7Q96M83 1385 aa13.6□□□□□ -0.23
CUBN-204ENST00000438254 CHD2O14647 1828 aaKnown RBP13.6□□□□□ -0.23
CUBN-204ENST00000438254 PTCH1Q13635 1447 aa13.6□□□□□ -0.23
CUBN-204ENST00000438254 NWD1Q149M9 1564 aa13.6□□□□□ -0.23
CUBN-204ENST00000438254 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
CUBN-204ENST00000438254 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
CUBN-204ENST00000438254 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
CUBN-204ENST00000438254 DISP3Q9P2K9 1392 aa13.59□□□□□ -0.23
CUBN-204ENST00000438254 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
CUBN-204ENST00000438254 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
CUBN-204ENST00000438254 BCANQ96GW7 911 aa13.58□□□□□ -0.24
CUBN-204ENST00000438254 STK26Q9P289 416 aa13.58□□□□□ -0.24
CUBN-204ENST00000438254 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
CUBN-204ENST00000438254 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
CUBN-204ENST00000438254 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
CUBN-204ENST00000438254 AMOTL2Q9Y2J4 779 aa13.56□□□□□ -0.24
CUBN-204ENST00000438254 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
CUBN-204ENST00000438254 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
CUBN-204ENST00000438254 TMF1P82094 1093 aa13.55□□□□□ -0.24
CUBN-204ENST00000438254 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
CUBN-204ENST00000438254 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
CUBN-204ENST00000438254 KCNA6P17658 529 aa13.53□□□□□ -0.24
CUBN-204ENST00000438254 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
CUBN-204ENST00000438254 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
CUBN-204ENST00000438254 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.25
CUBN-204ENST00000438254 MYOM1P52179 1685 aa13.52□□□□□ -0.25
CUBN-204ENST00000438254 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
CUBN-204ENST00000438254 POGKQ9P215 609 aa13.51□□□□□ -0.25
CUBN-204ENST00000438254 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
CUBN-204ENST00000438254 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
CUBN-204ENST00000438254 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
CUBN-204ENST00000438254 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
CUBN-204ENST00000438254 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
CUBN-204ENST00000438254 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
CUBN-204ENST00000438254 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
CUBN-204ENST00000438254 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
CUBN-204ENST00000438254 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
CUBN-204ENST00000438254 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
CUBN-204ENST00000438254 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
CUBN-204ENST00000438254 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.26
CUBN-204ENST00000438254 ATP7BP35670 1465 aa13.45□□□□□ -0.26
CUBN-204ENST00000438254 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
CUBN-204ENST00000438254 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
CUBN-204ENST00000438254 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
CUBN-204ENST00000438254 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
CUBN-204ENST00000438254 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
CUBN-204ENST00000438254 FMN2Q9NZ56 1722 aa13.43□□□□□ -0.26
CUBN-204ENST00000438254 XIRP1Q702N8 1843 aaKnown RBP13.43□□□□□ -0.26
CUBN-204ENST00000438254 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
CUBN-204ENST00000438254 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
CUBN-204ENST00000438254 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
CUBN-204ENST00000438254 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
CUBN-204ENST00000438254 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms