RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 CARD14Q9BXL6 1004 aa26.61■■□□□ 1.85
CHRNA7-202ENST00000437966 DLC1Q96QB1 1528 aa26.6■■□□□ 1.85
CHRNA7-202ENST00000437966 FAM9BQ8IZU0 186 aa26.59■■□□□ 1.85
CHRNA7-202ENST00000437966 CDK19Q9BWU1 502 aa26.58■■□□□ 1.85
CHRNA7-202ENST00000437966 PARD3Q8TEW0 1356 aa26.58■■□□□ 1.85
CHRNA7-202ENST00000437966 AMER1Q5JTC6 1135 aaPredicted RBP26.58■■□□□ 1.85
CHRNA7-202ENST00000437966 MYBBP1AQ9BQG0 1328 aaKnown RBP26.58■■□□□ 1.85
CHRNA7-202ENST00000437966 MED14O60244 1454 aa26.58■■□□□ 1.84
CHRNA7-202ENST00000437966 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
CHRNA7-202ENST00000437966 PUS7Q96PZ0 661 aaKnown RBP26.56■■□□□ 1.84
CHRNA7-202ENST00000437966 TBX22Q9Y458 520 aa26.55■■□□□ 1.84
CHRNA7-202ENST00000437966 ROBO2Q9HCK4 1378 aa26.54■■□□□ 1.84
CHRNA7-202ENST00000437966 ANKLE2Q86XL3 938 aa26.53■■□□□ 1.84
CHRNA7-202ENST00000437966 AMOTL2Q9Y2J4 779 aa26.52■■□□□ 1.84
CHRNA7-202ENST00000437966 SETD1BQ9UPS6 1966 aaKnown RBP26.52■■□□□ 1.84
CHRNA7-202ENST00000437966 ZNF142P52746 1687 aaPredicted RBP26.51■■□□□ 1.83
CHRNA7-202ENST00000437966 SIRT1Q96EB6 747 aa26.51■■□□□ 1.83
CHRNA7-202ENST00000437966 TECPR2O15040 1411 aa26.51■■□□□ 1.83
CHRNA7-202ENST00000437966 KNDC1Q76NI1 1749 aa26.49■■□□□ 1.83
CHRNA7-202ENST00000437966 FAM135BQ49AJ0 1406 aa26.49■■□□□ 1.83
CHRNA7-202ENST00000437966 NSD3Q9BZ95 1437 aa26.49■■□□□ 1.83
CHRNA7-202ENST00000437966 CPS1P31327 1500 aa26.48■■□□□ 1.83
CHRNA7-202ENST00000437966 WASLO00401 505 aaPredicted RBP26.46■■□□□ 1.83
CHRNA7-202ENST00000437966 NLRP13Q86W25 1043 aa26.46■■□□□ 1.83
CHRNA7-202ENST00000437966 BRD4O60885 1362 aaPredicted RBP26.46■■□□□ 1.83
CHRNA7-202ENST00000437966 HNRNPUQ00839 825 aaKnown RBP eCLIP26.46■■□□□ 1.83
CHRNA7-202ENST00000437966 ATAD2Q6PL18 1390 aa26.45■■□□□ 1.82
CHRNA7-202ENST00000437966 CABP1Q9NZU7 370 aa26.45■■□□□ 1.82
CHRNA7-202ENST00000437966 PNISRQ8TF01 805 aaKnown RBP26.44■■□□□ 1.82
CHRNA7-202ENST00000437966 NCKAP5LQ9HCH0 1330 aa26.43■■□□□ 1.82
CHRNA7-202ENST00000437966 ANKRD36BQ8N2N9 1353 aa26.43■■□□□ 1.82
CHRNA7-202ENST00000437966 PPP2R1AP30153 589 aa26.43■■□□□ 1.82
CHRNA7-202ENST00000437966 NPC1L1Q9UHC9 1359 aa26.42■■□□□ 1.82
CHRNA7-202ENST00000437966 DIP2AQ14689 1571 aa26.41■■□□□ 1.82
CHRNA7-202ENST00000437966 KDM4FA0A1W2PPD8 638 aa26.41■■□□□ 1.82
CHRNA7-202ENST00000437966 A0A1W2PP64 1363 aa26.4■■□□□ 1.82
CHRNA7-202ENST00000437966 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.82
CHRNA7-202ENST00000437966 KCNA6P17658 529 aa26.39■■□□□ 1.82
CHRNA7-202ENST00000437966 NUDT16Q96DE0 195 aaKnown RBP26.38■■□□□ 1.81
CHRNA7-202ENST00000437966 NINLQ9Y2I6 1382 aa26.38■■□□□ 1.81
CHRNA7-202ENST00000437966 CD163L1Q9NR16 1453 aa26.37■■□□□ 1.81
CHRNA7-202ENST00000437966 SENP3-EIF4A1A0A087X0R7 540 aa26.37■■□□□ 1.81
CHRNA7-202ENST00000437966 NUTM2FA1L443 756 aa26.37■■□□□ 1.81
CHRNA7-202ENST00000437966 TERF2IPQ9NYB0 399 aa26.37■■□□□ 1.81
CHRNA7-202ENST00000437966 TNNT2P45379 298 aaPredicted RBP26.35■■□□□ 1.81
CHRNA7-202ENST00000437966 MORC1Q86VD1 984 aa26.35■■□□□ 1.81
CHRNA7-202ENST00000437966 NPHP4O75161 1426 aaPredicted RBP26.34■■□□□ 1.81
CHRNA7-202ENST00000437966 CGNL1Q0VF96 1302 aa26.34■■□□□ 1.81
CHRNA7-202ENST00000437966 HDGFL2Q7Z4V5 671 aaPredicted RBP26.34■■□□□ 1.81
CHRNA7-202ENST00000437966 PRR36Q9H6K5 1346 aa26.33■■□□□ 1.81
CHRNA7-202ENST00000437966 PTCH1Q13635 1447 aa26.32■■□□□ 1.8
CHRNA7-202ENST00000437966 PPIP5K1Q6PFW1 1433 aa26.32■■□□□ 1.8
CHRNA7-202ENST00000437966 RBM33Q96EV2 1170 aaKnown RBP26.31■■□□□ 1.8
CHRNA7-202ENST00000437966 PIK3R4Q99570 1358 aa26.31■■□□□ 1.8
CHRNA7-202ENST00000437966 XRN1Q8IZH2 1706 aaKnown RBP26.31■■□□□ 1.8
CHRNA7-202ENST00000437966 HSPA2P54652 639 aa26.29■■□□□ 1.8
CHRNA7-202ENST00000437966 CCDC61Q9Y6R9 512 aa26.29■■□□□ 1.8
CHRNA7-202ENST00000437966 GGNBP2Q9H3C7 697 aa26.28■■□□□ 1.8
CHRNA7-202ENST00000437966 USP32Q8NFA0 1604 aa26.27■■□□□ 1.8
CHRNA7-202ENST00000437966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.27■■□□□ 1.8
CHRNA7-202ENST00000437966 ADGRB2O60241 1585 aa26.26■■□□□ 1.79
CHRNA7-202ENST00000437966 FYB1O15117 783 aa26.25■■□□□ 1.79
CHRNA7-202ENST00000437966 ATP7BP35670 1465 aa26.25■■□□□ 1.79
CHRNA7-202ENST00000437966 SCAF1Q9H7N4 1312 aaKnown RBP26.25■■□□□ 1.79
CHRNA7-202ENST00000437966 CHD2O14647 1828 aaKnown RBP26.24■■□□□ 1.79
CHRNA7-202ENST00000437966 GTF3C3Q9Y5Q9 886 aa26.23■■□□□ 1.79
CHRNA7-202ENST00000437966 CPSF1Q10570 1443 aaKnown RBP26.21■■□□□ 1.79
CHRNA7-202ENST00000437966 NSD2O96028 1365 aa26.2■■□□□ 1.79
CHRNA7-202ENST00000437966 ADAMTS8Q9UP79 889 aa26.19■■□□□ 1.78
CHRNA7-202ENST00000437966 ZBED9Q6R2W3 1325 aa26.17■■□□□ 1.78
CHRNA7-202ENST00000437966 PMFBP1Q8TBY8 1022 aa26.17■■□□□ 1.78
CHRNA7-202ENST00000437966 CDC42BPGQ6DT37 1551 aa26.17■■□□□ 1.78
CHRNA7-202ENST00000437966 ACEP12821 1306 aa26.16■■□□□ 1.78
CHRNA7-202ENST00000437966 MTHFSP49914 203 aa26.16■■□□□ 1.78
CHRNA7-202ENST00000437966 WDR43Q15061 677 aaKnown RBP eCLIP26.16■■□□□ 1.78
CHRNA7-202ENST00000437966 ZRANB1Q9UGI0 708 aa26.16■■□□□ 1.78
CHRNA7-202ENST00000437966 PLEKHG3A1L390 1219 aa26.15■■□□□ 1.78
CHRNA7-202ENST00000437966 NME9Q86XW9 330 aa26.15■■□□□ 1.78
CHRNA7-202ENST00000437966 SALL2Q9Y467 1007 aaPredicted RBP26.15■■□□□ 1.78
CHRNA7-202ENST00000437966 NKTRP30414 1462 aaKnown RBP26.13■■□□□ 1.77
CHRNA7-202ENST00000437966 EDC4Q6P2E9 1401 aaKnown RBP26.13■■□□□ 1.77
CHRNA7-202ENST00000437966 ZNF692Q9BU19 519 aaPredicted RBP26.12■■□□□ 1.77
CHRNA7-202ENST00000437966 FBLN1P23142 703 aa26.12■■□□□ 1.77
CHRNA7-202ENST00000437966 TOPAZ1Q8N9V7 1692 aa26.11■■□□□ 1.77
CHRNA7-202ENST00000437966 C14orf37Q86TY3 774 aa26.11■■□□□ 1.77
CHRNA7-202ENST00000437966 RGPD8O14715 1765 aaPredicted RBP26.1■■□□□ 1.77
CHRNA7-202ENST00000437966 POLR3AO14802 1390 aaPredicted RBP26.1■■□□□ 1.77
CHRNA7-202ENST00000437966 PROSER2Q86WR7 435 aaPredicted RBP26.1■■□□□ 1.77
CHRNA7-202ENST00000437966 KIF20BQ96Q89 1820 aa26.1■■□□□ 1.77
CHRNA7-202ENST00000437966 LMTK3Q96Q04 1460 aa26.09■■□□□ 1.77
CHRNA7-202ENST00000437966 ITSN1Q15811 1721 aa26.09■■□□□ 1.77
CHRNA7-202ENST00000437966 NALCNQ8IZF0 1738 aa26.09■■□□□ 1.77
CHRNA7-202ENST00000437966 AKAP12Q02952 1782 aa26.09■■□□□ 1.77
CHRNA7-202ENST00000437966 NGDNQ8NEJ9 315 aaKnown RBP26.07■■□□□ 1.76
CHRNA7-202ENST00000437966 MON2Q7Z3U7 1717 aa26.07■■□□□ 1.76
CHRNA7-202ENST00000437966 BLMP54132 1417 aaPredicted RBP26.07■■□□□ 1.76
CHRNA7-202ENST00000437966 ANKRD26Q9UPS8 1709 aa26.06■■□□□ 1.76
CHRNA7-202ENST00000437966 CCDC146Q8IYE0 955 aa26.06■■□□□ 1.76
CHRNA7-202ENST00000437966 TTC21BQ7Z4L5 1316 aa26.06■■□□□ 1.76
CHRNA7-202ENST00000437966 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms