RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 SLIT1O75093 1534 aa13.25□□□□□ -0.29
LINC00858-202ENST00000437892 DLC1Q96QB1 1528 aa13.25□□□□□ -0.29
LINC00858-202ENST00000437892 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
LINC00858-202ENST00000437892 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
LINC00858-202ENST00000437892 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
LINC00858-202ENST00000437892 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00858-202ENST00000437892 MYOM1P52179 1685 aa13.24□□□□□ -0.29
LINC00858-202ENST00000437892 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
LINC00858-202ENST00000437892 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
LINC00858-202ENST00000437892 PTPRMP28827 1452 aa13.23□□□□□ -0.29
LINC00858-202ENST00000437892 RIMS1Q86UR5 1692 aaKnown RBP13.22□□□□□ -0.29
LINC00858-202ENST00000437892 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
LINC00858-202ENST00000437892 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
LINC00858-202ENST00000437892 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
LINC00858-202ENST00000437892 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
LINC00858-202ENST00000437892 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
LINC00858-202ENST00000437892 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
LINC00858-202ENST00000437892 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
LINC00858-202ENST00000437892 TECPR2O15040 1411 aa13.2□□□□□ -0.3
LINC00858-202ENST00000437892 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
LINC00858-202ENST00000437892 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
LINC00858-202ENST00000437892 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
LINC00858-202ENST00000437892 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
LINC00858-202ENST00000437892 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
LINC00858-202ENST00000437892 CPS1P31327 1500 aa13.18□□□□□ -0.3
LINC00858-202ENST00000437892 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
LINC00858-202ENST00000437892 MED14O60244 1454 aa13.16□□□□□ -0.3
LINC00858-202ENST00000437892 ABCC11Q96J66 1382 aa13.16□□□□□ -0.3
LINC00858-202ENST00000437892 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
LINC00858-202ENST00000437892 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
LINC00858-202ENST00000437892 NPC1L1Q9UHC9 1359 aa13.15□□□□□ -0.3
LINC00858-202ENST00000437892 FAM135BQ49AJ0 1406 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 ADAMTS13Q76LX8 1427 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
LINC00858-202ENST00000437892 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
LINC00858-202ENST00000437892 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
LINC00858-202ENST00000437892 CEBPAP49715 358 aaPredicted RBP13.13□□□□□ -0.31
LINC00858-202ENST00000437892 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
LINC00858-202ENST00000437892 RALBP1Q15311 655 aa13.12□□□□□ -0.31
LINC00858-202ENST00000437892 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
LINC00858-202ENST00000437892 THEMISQ8N1K5 641 aaPredicted RBP13.11□□□□□ -0.31
LINC00858-202ENST00000437892 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
LINC00858-202ENST00000437892 ADGRB2O60241 1585 aa13.11□□□□□ -0.31
LINC00858-202ENST00000437892 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
LINC00858-202ENST00000437892 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
LINC00858-202ENST00000437892 METP08581 1390 aa13.09□□□□□ -0.31
LINC00858-202ENST00000437892 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
LINC00858-202ENST00000437892 PANK3Q9H999 370 aa13.09□□□□□ -0.31
LINC00858-202ENST00000437892 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
LINC00858-202ENST00000437892 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.31
LINC00858-202ENST00000437892 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
LINC00858-202ENST00000437892 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
LINC00858-202ENST00000437892 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
LINC00858-202ENST00000437892 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
LINC00858-202ENST00000437892 LTKP29376 864 aa13.07□□□□□ -0.32
LINC00858-202ENST00000437892 PRAM1Q96QH2 718 aa13.06□□□□□ -0.32
LINC00858-202ENST00000437892 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
LINC00858-202ENST00000437892 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
LINC00858-202ENST00000437892 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
LINC00858-202ENST00000437892 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
LINC00858-202ENST00000437892 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
LINC00858-202ENST00000437892 TBX22Q9Y458 520 aa13.04□□□□□ -0.32
LINC00858-202ENST00000437892 INSRP06213 1382 aa13.04□□□□□ -0.32
LINC00858-202ENST00000437892 NLRP13Q86W25 1043 aa13.03□□□□□ -0.32
LINC00858-202ENST00000437892 MRS2Q9HD23 443 aa13.03□□□□□ -0.32
LINC00858-202ENST00000437892 POGKQ9P215 609 aa13.03□□□□□ -0.32
LINC00858-202ENST00000437892 STK26Q9P289 416 aa13.03□□□□□ -0.32
LINC00858-202ENST00000437892 NSD2O96028 1365 aa13.03□□□□□ -0.32
LINC00858-202ENST00000437892 ATP7BP35670 1465 aa13.03□□□□□ -0.32
LINC00858-202ENST00000437892 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
LINC00858-202ENST00000437892 PLEKHH1Q9ULM0 1364 aa13.02□□□□□ -0.33
LINC00858-202ENST00000437892 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
LINC00858-202ENST00000437892 ROBO2Q9HCK4 1378 aa13.01□□□□□ -0.33
LINC00858-202ENST00000437892 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
LINC00858-202ENST00000437892 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
LINC00858-202ENST00000437892 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
LINC00858-202ENST00000437892 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
LINC00858-202ENST00000437892 NWD1Q149M9 1564 aa12.98□□□□□ -0.33
LINC00858-202ENST00000437892 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
LINC00858-202ENST00000437892 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
LINC00858-202ENST00000437892 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
LINC00858-202ENST00000437892 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
LINC00858-202ENST00000437892 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
LINC00858-202ENST00000437892 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
LINC00858-202ENST00000437892 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
LINC00858-202ENST00000437892 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
LINC00858-202ENST00000437892 ANKLE2Q86XL3 938 aa12.97□□□□□ -0.33
LINC00858-202ENST00000437892 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.33
LINC00858-202ENST00000437892 CGNL1Q0VF96 1302 aa12.96□□□□□ -0.33
LINC00858-202ENST00000437892 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00858-202ENST00000437892 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
LINC00858-202ENST00000437892 BCANQ96GW7 911 aa12.96□□□□□ -0.33
LINC00858-202ENST00000437892 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
LINC00858-202ENST00000437892 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.33
LINC00858-202ENST00000437892 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms