RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.87
RBFOX1-205ENST00000436368 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
RBFOX1-205ENST00000436368 MSH5O43196 834 aa20.5■□□□□ 0.87
RBFOX1-205ENST00000436368 TULP4Q9NRJ4 1543 aa20.49■□□□□ 0.87
RBFOX1-205ENST00000436368 APAF1O14727 1248 aa20.49■□□□□ 0.87
RBFOX1-205ENST00000436368 TMEM132EQ6IEE7 984 aa20.49■□□□□ 0.87
RBFOX1-205ENST00000436368 CENPQQ7L2Z9 268 aaPredicted RBP20.49■□□□□ 0.87
RBFOX1-205ENST00000436368 TMEM131LA2VDJ0 1609 aa20.49■□□□□ 0.87
RBFOX1-205ENST00000436368 IDI1Q13907 227 aa20.48■□□□□ 0.87
RBFOX1-205ENST00000436368 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
RBFOX1-205ENST00000436368 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
RBFOX1-205ENST00000436368 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-205ENST00000436368 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
RBFOX1-205ENST00000436368 SLC12A5Q9H2X9 1139 aa20.46■□□□□ 0.87
RBFOX1-205ENST00000436368 TERF2IPQ9NYB0 399 aa20.45■□□□□ 0.86
RBFOX1-205ENST00000436368 PLIN1O60240 522 aa20.44■□□□□ 0.86
RBFOX1-205ENST00000436368 AAMPQ13685 434 aa20.44■□□□□ 0.86
RBFOX1-205ENST00000436368 IPO9Q96P70 1041 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-205ENST00000436368 MED14O60244 1454 aa20.44■□□□□ 0.86
RBFOX1-205ENST00000436368 ABCC11Q96J66 1382 aa20.43■□□□□ 0.86
RBFOX1-205ENST00000436368 CCDC27Q2M243 656 aa20.43■□□□□ 0.86
RBFOX1-205ENST00000436368 WDR63Q8IWG1 891 aa20.43■□□□□ 0.86
RBFOX1-205ENST00000436368 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
RBFOX1-205ENST00000436368 SHPRHQ149N8 1683 aa20.42■□□□□ 0.86
RBFOX1-205ENST00000436368 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
RBFOX1-205ENST00000436368 IQSEC2Q5JU85 1478 aa20.42■□□□□ 0.86
RBFOX1-205ENST00000436368 FAM69CQ0P6D2 419 aa20.41■□□□□ 0.86
RBFOX1-205ENST00000436368 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
RBFOX1-205ENST00000436368 PTPRMP28827 1452 aa20.4■□□□□ 0.86
RBFOX1-205ENST00000436368 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
RBFOX1-205ENST00000436368 POGKQ9P215 609 aa20.4■□□□□ 0.86
RBFOX1-205ENST00000436368 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
RBFOX1-205ENST00000436368 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.85
RBFOX1-205ENST00000436368 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
RBFOX1-205ENST00000436368 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
RBFOX1-205ENST00000436368 CFAP65Q6ZU64 1925 aaKnown RBP20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 PDE4AP27815 886 aa20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 KDM2BQ8NHM5 1336 aa20.38■□□□□ 0.85
RBFOX1-205ENST00000436368 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-205ENST00000436368 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
RBFOX1-205ENST00000436368 SPATA31D1Q6ZQQ2 1576 aa20.37■□□□□ 0.85
RBFOX1-205ENST00000436368 MTHFSP49914 203 aa20.37■□□□□ 0.85
RBFOX1-205ENST00000436368 BACH2Q9BYV9 841 aa20.37■□□□□ 0.85
RBFOX1-205ENST00000436368 ALKQ9UM73 1620 aa20.36■□□□□ 0.85
RBFOX1-205ENST00000436368 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
RBFOX1-205ENST00000436368 CT47B1P0C2W7 299 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-205ENST00000436368 DDRGK1Q96HY6 314 aa20.35■□□□□ 0.85
RBFOX1-205ENST00000436368 CABP2Q9NPB3 220 aa20.35■□□□□ 0.85
RBFOX1-205ENST00000436368 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
RBFOX1-205ENST00000436368 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
RBFOX1-205ENST00000436368 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.85
RBFOX1-205ENST00000436368 C20orf194Q5TEA3 1177 aa20.33■□□□□ 0.85
RBFOX1-205ENST00000436368 TCP11L2Q8N4U5 519 aa20.33■□□□□ 0.85
RBFOX1-205ENST00000436368 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.33■□□□□ 0.85
RBFOX1-205ENST00000436368 ARHGEF40Q8TER5 1519 aa20.33■□□□□ 0.84
RBFOX1-205ENST00000436368 PRAM1Q96QH2 718 aa20.32■□□□□ 0.84
RBFOX1-205ENST00000436368 STK26Q9P289 416 aa20.32■□□□□ 0.84
RBFOX1-205ENST00000436368 ANKRD26Q9UPS8 1709 aa20.32■□□□□ 0.84
RBFOX1-205ENST00000436368 ADGRB2O60241 1585 aa20.32■□□□□ 0.84
RBFOX1-205ENST00000436368 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
RBFOX1-205ENST00000436368 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
RBFOX1-205ENST00000436368 ATP7BP35670 1465 aa20.3■□□□□ 0.84
RBFOX1-205ENST00000436368 RIMS2Q9UQ26 1411 aa20.29■□□□□ 0.84
RBFOX1-205ENST00000436368 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
RBFOX1-205ENST00000436368 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
RBFOX1-205ENST00000436368 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
RBFOX1-205ENST00000436368 MAPK8IP3Q9UPT6 1336 aa20.29■□□□□ 0.84
RBFOX1-205ENST00000436368 MYO5BQ9ULV0 1848 aa20.28■□□□□ 0.84
RBFOX1-205ENST00000436368 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.84
RBFOX1-205ENST00000436368 MINK1Q8N4C8 1332 aaPredicted RBP20.27■□□□□ 0.84
RBFOX1-205ENST00000436368 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.83
RBFOX1-205ENST00000436368 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
RBFOX1-205ENST00000436368 IL16Q14005 1332 aa20.26■□□□□ 0.83
RBFOX1-205ENST00000436368 FAM161AQ3B820 660 aa20.25■□□□□ 0.83
RBFOX1-205ENST00000436368 FBXO31Q5XUX0 539 aaPredicted RBP20.25■□□□□ 0.83
RBFOX1-205ENST00000436368 BCAR3O75815 825 aa20.24■□□□□ 0.83
RBFOX1-205ENST00000436368 NEFMP07197 916 aa20.24■□□□□ 0.83
RBFOX1-205ENST00000436368 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
RBFOX1-205ENST00000436368 COL3A1P02461 1466 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-205ENST00000436368 CLUAP1Q96AJ1 413 aa20.23■□□□□ 0.83
RBFOX1-205ENST00000436368 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
RBFOX1-205ENST00000436368 ZMYM3Q14202 1370 aa20.23■□□□□ 0.83
RBFOX1-205ENST00000436368 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 NLRP1Q9C000 1473 aa20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 CD163L1Q9NR16 1453 aa20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 CDC42BPGQ6DT37 1551 aa20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
RBFOX1-205ENST00000436368 KIF20BQ96Q89 1820 aa20.21■□□□□ 0.83
RBFOX1-205ENST00000436368 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-205ENST00000436368 FYB1O15117 783 aa20.2■□□□□ 0.82
RBFOX1-205ENST00000436368 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-205ENST00000436368 GGNBP2Q9H3C7 697 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms