RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SETBP1Q9Y6X0 1596 aa11.64□□□□□ -0.55
VPS50-203ENST00000436177 NAIPQ13075 1403 aa11.64□□□□□ -0.55
VPS50-203ENST00000436177 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
VPS50-203ENST00000436177 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
VPS50-203ENST00000436177 PTPRUQ92729 1446 aa11.62□□□□□ -0.55
VPS50-203ENST00000436177 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
VPS50-203ENST00000436177 POTEAQ6S8J7 498 aa11.62□□□□□ -0.55
VPS50-203ENST00000436177 COL16A1Q07092 1604 aaPredicted RBP11.61□□□□□ -0.55
VPS50-203ENST00000436177 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.61□□□□□ -0.55
VPS50-203ENST00000436177 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
VPS50-203ENST00000436177 METP08581 1390 aa11.61□□□□□ -0.55
VPS50-203ENST00000436177 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
VPS50-203ENST00000436177 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
VPS50-203ENST00000436177 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
VPS50-203ENST00000436177 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
VPS50-203ENST00000436177 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
VPS50-203ENST00000436177 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
VPS50-203ENST00000436177 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
VPS50-203ENST00000436177 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
VPS50-203ENST00000436177 NEXMIFQ5QGS0 1516 aa11.59□□□□□ -0.55
VPS50-203ENST00000436177 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
VPS50-203ENST00000436177 RPGRIP1LQ68CZ1 1315 aa11.59□□□□□ -0.55
VPS50-203ENST00000436177 NRXN3Q9Y4C0 1643 aa11.58□□□□□ -0.56
VPS50-203ENST00000436177 GABBR2O75899 941 aa11.58□□□□□ -0.56
VPS50-203ENST00000436177 MST1RQ04912 1400 aa11.58□□□□□ -0.56
VPS50-203ENST00000436177 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
VPS50-203ENST00000436177 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
VPS50-203ENST00000436177 LRP6O75581 1613 aa11.57□□□□□ -0.56
VPS50-203ENST00000436177 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
VPS50-203ENST00000436177 KIF1BO60333 1816 aa11.55□□□□□ -0.56
VPS50-203ENST00000436177 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
VPS50-203ENST00000436177 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
VPS50-203ENST00000436177 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
VPS50-203ENST00000436177 RXRBP28702 533 aa11.53□□□□□ -0.56
VPS50-203ENST00000436177 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
VPS50-203ENST00000436177 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
VPS50-203ENST00000436177 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
VPS50-203ENST00000436177 AFF2P51816 1311 aa11.52□□□□□ -0.57
VPS50-203ENST00000436177 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
VPS50-203ENST00000436177 RGL3Q3MIN7 710 aa11.51□□□□□ -0.57
VPS50-203ENST00000436177 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
VPS50-203ENST00000436177 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
VPS50-203ENST00000436177 NALCNQ8IZF0 1738 aa11.51□□□□□ -0.57
VPS50-203ENST00000436177 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
VPS50-203ENST00000436177 ANKRD30BQ9BXX2 1392 aa11.51□□□□□ -0.57
VPS50-203ENST00000436177 STK26Q9P289 416 aa11.5□□□□□ -0.57
VPS50-203ENST00000436177 PRAG1Q86YV5 1406 aa11.5□□□□□ -0.57
VPS50-203ENST00000436177 NHSL1Q5SYE7 1610 aa11.49□□□□□ -0.57
VPS50-203ENST00000436177 ADAMTS2O95450 1211 aa11.49□□□□□ -0.57
VPS50-203ENST00000436177 NGLY1Q96IV0 654 aa11.49□□□□□ -0.57
VPS50-203ENST00000436177 MPHOSPH9Q99550 1183 aa11.49□□□□□ -0.57
VPS50-203ENST00000436177 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
VPS50-203ENST00000436177 ESCO1Q5FWF5 840 aa11.48□□□□□ -0.57
VPS50-203ENST00000436177 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
VPS50-203ENST00000436177 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
VPS50-203ENST00000436177 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
VPS50-203ENST00000436177 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
VPS50-203ENST00000436177 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.57
VPS50-203ENST00000436177 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.57
VPS50-203ENST00000436177 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
VPS50-203ENST00000436177 PPLO60437 1756 aa11.46□□□□□ -0.58
VPS50-203ENST00000436177 SPATA31E1Q6ZUB1 1445 aa11.45□□□□□ -0.58
VPS50-203ENST00000436177 SOS2Q07890 1332 aaPredicted RBP11.45□□□□□ -0.58
VPS50-203ENST00000436177 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
VPS50-203ENST00000436177 QTRT2Q9H974 415 aaKnown RBP11.45□□□□□ -0.58
VPS50-203ENST00000436177 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
VPS50-203ENST00000436177 TECPR2O15040 1411 aa11.43□□□□□ -0.58
VPS50-203ENST00000436177 FOXO3O43524 673 aa11.43□□□□□ -0.58
VPS50-203ENST00000436177 TMEM132EQ6IEE7 984 aa11.43□□□□□ -0.58
VPS50-203ENST00000436177 WAPLQ7Z5K2 1190 aa11.43□□□□□ -0.58
VPS50-203ENST00000436177 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS50-203ENST00000436177 USP21Q9UK80 565 aa11.43□□□□□ -0.58
VPS50-203ENST00000436177 PIK3C2GO75747 1445 aa11.43□□□□□ -0.58
VPS50-203ENST00000436177 ABCC11Q96J66 1382 aa11.42□□□□□ -0.58
VPS50-203ENST00000436177 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
VPS50-203ENST00000436177 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
VPS50-203ENST00000436177 TRPC5Q9UL62 973 aaPredicted RBP11.42□□□□□ -0.58
VPS50-203ENST00000436177 RGS12O14924 1447 aa11.42□□□□□ -0.58
VPS50-203ENST00000436177 YTHDC2Q9H6S0 1430 aaKnown RBP11.42□□□□□ -0.58
VPS50-203ENST00000436177 LAMC1P11047 1609 aa11.41□□□□□ -0.58
VPS50-203ENST00000436177 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
VPS50-203ENST00000436177 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
VPS50-203ENST00000436177 ATAD2Q6PL18 1390 aa11.4□□□□□ -0.59
VPS50-203ENST00000436177 POGKQ9P215 609 aa11.39□□□□□ -0.59
VPS50-203ENST00000436177 PLEKHH1Q9ULM0 1364 aa11.39□□□□□ -0.59
VPS50-203ENST00000436177 MYOM2P54296 1465 aa11.38□□□□□ -0.59
VPS50-203ENST00000436177 PXDNQ92626 1479 aa11.38□□□□□ -0.59
VPS50-203ENST00000436177 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS50-203ENST00000436177 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
VPS50-203ENST00000436177 RAB3GAP2Q9H2M9 1393 aa11.38□□□□□ -0.59
VPS50-203ENST00000436177 PSME1Q06323 249 aa11.37□□□□□ -0.59
VPS50-203ENST00000436177 CFAP70Q5T0N1 1121 aa11.37□□□□□ -0.59
VPS50-203ENST00000436177 LHX8Q68G74 356 aa11.37□□□□□ -0.59
VPS50-203ENST00000436177 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
VPS50-203ENST00000436177 FNBP4Q8N3X1 1017 aaPredicted RBP11.37□□□□□ -0.59
VPS50-203ENST00000436177 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
VPS50-203ENST00000436177 PRAM1Q96QH2 718 aa11.37□□□□□ -0.59
VPS50-203ENST00000436177 COL22A1Q8NFW1 1626 aaPredicted RBP11.36□□□□□ -0.59
VPS50-203ENST00000436177 KNDC1Q76NI1 1749 aa11.36□□□□□ -0.59
VPS50-203ENST00000436177 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms