RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 CLUAP1Q96AJ1 413 aa8.43□□□□□ -1.06
HMGB1P45-201ENST00000435986 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
HMGB1P45-201ENST00000435986 MOXD2PA6NHM9 499 aa8.42□□□□□ -1.06
HMGB1P45-201ENST00000435986 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
HMGB1P45-201ENST00000435986 ARID3AQ99856 593 aa8.42□□□□□ -1.06
HMGB1P45-201ENST00000435986 ZBTB3Q9H5J0 574 aa8.42□□□□□ -1.06
HMGB1P45-201ENST00000435986 SOCS7O14512 581 aa8.41□□□□□ -1.06
HMGB1P45-201ENST00000435986 SLC10A3P09131 477 aa8.41□□□□□ -1.06
HMGB1P45-201ENST00000435986 GCGRP47871 477 aa8.41□□□□□ -1.06
HMGB1P45-201ENST00000435986 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
HMGB1P45-201ENST00000435986 LILRB3O75022 631 aa8.39□□□□□ -1.07
HMGB1P45-201ENST00000435986 FDX1P10109 184 aa8.39□□□□□ -1.07
HMGB1P45-201ENST00000435986 TJAP1Q5JTD0 557 aa8.39□□□□□ -1.07
HMGB1P45-201ENST00000435986 AP1G2O75843 785 aa8.38□□□□□ -1.07
HMGB1P45-201ENST00000435986 NDUFV2P19404 249 aa8.38□□□□□ -1.07
HMGB1P45-201ENST00000435986 CCDC97Q96F63 343 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P45-201ENST00000435986 MTRQ99707 1265 aa8.38□□□□□ -1.07
HMGB1P45-201ENST00000435986 HOXA2O43364 376 aa8.37□□□□□ -1.07
HMGB1P45-201ENST00000435986 CFHP08603 1231 aa8.37□□□□□ -1.07
HMGB1P45-201ENST00000435986 KMT5BQ4FZB7 885 aa8.37□□□□□ -1.07
HMGB1P45-201ENST00000435986 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P45-201ENST00000435986 PRR14Q9BWN1 585 aa8.37□□□□□ -1.07
HMGB1P45-201ENST00000435986 SERPINA10Q9UK55 444 aa8.37□□□□□ -1.07
HMGB1P45-201ENST00000435986 A0A0G2JS52 829 aa8.36□□□□□ -1.07
HMGB1P45-201ENST00000435986 KCNC4Q03721 635 aa8.36□□□□□ -1.07
HMGB1P45-201ENST00000435986 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
HMGB1P45-201ENST00000435986 ZNF330Q9Y3S2 320 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P45-201ENST00000435986 ACTN4O43707 911 aaKnown RBP8.35□□□□□ -1.07
HMGB1P45-201ENST00000435986 IL21Q9HBE4 155 aa8.35□□□□□ -1.07
HMGB1P45-201ENST00000435986 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
HMGB1P45-201ENST00000435986 MTMR2Q13614 643 aa8.34□□□□□ -1.07
HMGB1P45-201ENST00000435986 QPCTQ16769 361 aa8.34□□□□□ -1.07
HMGB1P45-201ENST00000435986 ZNF777Q9ULD5 760 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P45-201ENST00000435986 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
HMGB1P45-201ENST00000435986 HRCP23327 699 aa8.33□□□□□ -1.08
HMGB1P45-201ENST00000435986 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
HMGB1P45-201ENST00000435986 ZNF516Q92618 1163 aa8.33□□□□□ -1.08
HMGB1P45-201ENST00000435986 POM121Q96HA1 1249 aa8.33□□□□□ -1.08
HMGB1P45-201ENST00000435986 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 BLOC1S3Q6QNY0 202 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 FNBP4Q8N3X1 1017 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 PNMA1Q8ND90 353 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 PCDHB3Q9Y5E6 796 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 NDUFB9Q9Y6M9 179 aa8.32□□□□□ -1.08
HMGB1P45-201ENST00000435986 ABL2P42684 1182 aa8.31□□□□□ -1.08
HMGB1P45-201ENST00000435986 COPS2P61201 443 aa8.31□□□□□ -1.08
HMGB1P45-201ENST00000435986 Q3C1V9 767 aa8.31□□□□□ -1.08
HMGB1P45-201ENST00000435986 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P45-201ENST00000435986 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
HMGB1P45-201ENST00000435986 TSC1Q92574 1164 aa8.31□□□□□ -1.08
HMGB1P45-201ENST00000435986 MTMR14Q8NCE2 650 aa8.3□□□□□ -1.08
HMGB1P45-201ENST00000435986 GDPD2Q9HCC8 539 aa8.3□□□□□ -1.08
HMGB1P45-201ENST00000435986 FUT2Q10981 343 aa8.29□□□□□ -1.08
HMGB1P45-201ENST00000435986 WASHC4Q2M389 1173 aa8.29□□□□□ -1.08
HMGB1P45-201ENST00000435986 NKX2-3Q8TAU0 364 aa8.29□□□□□ -1.08
HMGB1P45-201ENST00000435986 ZPR1O75312 459 aa8.28□□□□□ -1.08
HMGB1P45-201ENST00000435986 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
HMGB1P45-201ENST00000435986 TLL1O43897 1013 aa8.26□□□□□ -1.09
HMGB1P45-201ENST00000435986 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
HMGB1P45-201ENST00000435986 PCDHGC3Q9UN70 934 aa8.26□□□□□ -1.09
HMGB1P45-201ENST00000435986 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
HMGB1P45-201ENST00000435986 MORN1Q5T089 497 aa8.25□□□□□ -1.09
HMGB1P45-201ENST00000435986 FBXO31Q5XUX0 539 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P45-201ENST00000435986 RETREG3Q86VR2 466 aa8.25□□□□□ -1.09
HMGB1P45-201ENST00000435986 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
HMGB1P45-201ENST00000435986 RGS20O76081 388 aa8.24□□□□□ -1.09
HMGB1P45-201ENST00000435986 GUCA2AQ02747 115 aa8.24□□□□□ -1.09
HMGB1P45-201ENST00000435986 CTDSPL2Q05D32 466 aa8.24□□□□□ -1.09
HMGB1P45-201ENST00000435986 PDE4CQ08493 712 aa8.24□□□□□ -1.09
HMGB1P45-201ENST00000435986 NR1I2O75469 434 aa8.23□□□□□ -1.09
HMGB1P45-201ENST00000435986 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
HMGB1P45-201ENST00000435986 ACIN1Q9UKV3 1341 aaKnown RBP8.23□□□□□ -1.09
HMGB1P45-201ENST00000435986 DESI1Q6ICB0 168 aa8.22□□□□□ -1.09
HMGB1P45-201ENST00000435986 PPP1R18Q6NYC8 613 aa8.22□□□□□ -1.09
HMGB1P45-201ENST00000435986 SCUBE3Q8IX30 993 aa8.22□□□□□ -1.09
HMGB1P45-201ENST00000435986 HLA-CQ95604 372 aa8.21□□□□□ -1.1
HMGB1P45-201ENST00000435986 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 PPP1R15AO75807 674 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 ADH1BP00325 375 aa8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 SOX11P35716 441 aa8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 GLMNQ92990 594 aa8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 THAP11Q96EK4 314 aa8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 SLC27A5Q9Y2P5 690 aa8.2□□□□□ -1.1
HMGB1P45-201ENST00000435986 SALL2Q9Y467 1007 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P45-201ENST00000435986 ZBTB7CA1YPR0 619 aa8.18□□□□□ -1.1
HMGB1P45-201ENST00000435986 FMNL1O95466 1100 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P45-201ENST00000435986 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
HMGB1P45-201ENST00000435986 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
HMGB1P45-201ENST00000435986 ZNF592Q92610 1267 aa8.17□□□□□ -1.1
HMGB1P45-201ENST00000435986 S1PR4O95977 384 aa8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 BRICD5Q6PL45 260 aa8.16□□□□□ -1.1
HMGB1P45-201ENST00000435986 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms