RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
LDLRAD4-204ENST00000435606 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
LDLRAD4-204ENST00000435606 SKOR2Q2VWA4 1001 aaPredicted RBP12.91□□□□□ -0.34
LDLRAD4-204ENST00000435606 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
LDLRAD4-204ENST00000435606 SART3Q15020 963 aaKnown RBP12.91□□□□□ -0.34
LDLRAD4-204ENST00000435606 TATP17735 454 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD4-204ENST00000435606 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
LDLRAD4-204ENST00000435606 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD4-204ENST00000435606 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
LDLRAD4-204ENST00000435606 PLIN1O60240 522 aa12.9□□□□□ -0.34
LDLRAD4-204ENST00000435606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.34
LDLRAD4-204ENST00000435606 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 EPS15P42566 896 aa12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 GRIN2BQ13224 1484 aa12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 CCDC30Q5VVM6 783 aa12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 APAF1O14727 1248 aa12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 HMOX1P09601 288 aa12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD4-204ENST00000435606 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
LDLRAD4-204ENST00000435606 GPS2Q13227 327 aa12.88□□□□□ -0.35
LDLRAD4-204ENST00000435606 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
LDLRAD4-204ENST00000435606 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
LDLRAD4-204ENST00000435606 CCAR2Q8N163 923 aaKnown RBP12.87□□□□□ -0.35
LDLRAD4-204ENST00000435606 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 BICD2Q8TD16 824 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 IPO9Q96P70 1041 aaKnown RBP12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 PSMA5P28066 241 aa12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 DDX49Q9Y6V7 483 aaKnown RBP12.86□□□□□ -0.35
LDLRAD4-204ENST00000435606 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 DEKP35659 375 aaKnown RBP12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 CABP4P57796 275 aa12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 AAMPQ13685 434 aa12.85□□□□□ -0.35
LDLRAD4-204ENST00000435606 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 FOXD4L6Q3SYB3 417 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 FOXD4L3Q6VB84 417 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 HIP1O00291 1037 aa12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 ANKRD50Q9ULJ7 1429 aa12.84□□□□□ -0.35
LDLRAD4-204ENST00000435606 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.35
LDLRAD4-204ENST00000435606 ERC1Q8IUD2 1116 aa12.83□□□□□ -0.35
LDLRAD4-204ENST00000435606 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD4-204ENST00000435606 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
LDLRAD4-204ENST00000435606 GNAI3P08754 354 aa12.83□□□□□ -0.36
LDLRAD4-204ENST00000435606 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD4-204ENST00000435606 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.83□□□□□ -0.36
LDLRAD4-204ENST00000435606 CCDC73Q6ZRK6 1079 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 CLASRPQ8N2M8 674 aaKnown RBP12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 SASS6Q6UVJ0 657 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 CDK5RAP3Q96JB5 506 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 TTC39AQ5SRH9 613 aa12.82□□□□□ -0.36
LDLRAD4-204ENST00000435606 NAP1L1P55209 391 aaKnown RBP12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 SCAPERQ9BY12 1400 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 KIF21BO75037 1637 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 OFD1O75665 1012 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 PAF1Q8N7H5 531 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 FGD6Q6ZV73 1430 aa12.81□□□□□ -0.36
LDLRAD4-204ENST00000435606 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
LDLRAD4-204ENST00000435606 TXLNAP40222 546 aa12.8□□□□□ -0.36
LDLRAD4-204ENST00000435606 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
LDLRAD4-204ENST00000435606 NAT10Q9H0A0 1025 aaKnown RBP12.8□□□□□ -0.36
LDLRAD4-204ENST00000435606 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 CCDC173Q0VFZ6 552 aa12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 CDR1P51861 262 aa12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 SLC52A1Q9NWF4 448 aa12.79□□□□□ -0.36
LDLRAD4-204ENST00000435606 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 ATP2B2Q01814 1243 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms