RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 MAFBQ9Y5Q3 323 aaPredicted RBP6.35□□□□□ -1.39
PTPN12-206ENST00000435495 NDUFB9Q9Y6M9 179 aa6.35□□□□□ -1.39
PTPN12-206ENST00000435495 PRSS12P56730 875 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 PHLDB3Q6NSJ2 640 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 EYA1Q99502 592 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 ALG2Q9H553 416 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 VRTNQ9H8Y1 702 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 PER1O15534 1290 aaPredicted RBP6.34□□□□□ -1.39
PTPN12-206ENST00000435495 SEC24BO95487 1268 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 SLAIN2Q9P270 581 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 ZMIZ1Q9ULJ6 1067 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 USTQ9Y2C2 406 aa6.34□□□□□ -1.39
PTPN12-206ENST00000435495 DEPDC4Q8N2C3 294 aa6.33□□□□□ -1.4
PTPN12-206ENST00000435495 RDH13Q8NBN7 331 aa6.33□□□□□ -1.4
PTPN12-206ENST00000435495 RBM46Q8TBY0 533 aaKnown RBP6.33□□□□□ -1.4
PTPN12-206ENST00000435495 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
PTPN12-206ENST00000435495 WWC1Q8IX03 1113 aa6.32□□□□□ -1.4
PTPN12-206ENST00000435495 ZDHHC16Q969W1 377 aa6.32□□□□□ -1.4
PTPN12-206ENST00000435495 NR6A1Q15406 480 aa6.32□□□□□ -1.4
PTPN12-206ENST00000435495 CC2D2BQ6DHV5 1058 aa6.32□□□□□ -1.4
PTPN12-206ENST00000435495 KDM4AO75164 1064 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 SLC34A2O95436 690 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 SERPINB4P48594 390 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 HOXA2O43364 376 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 DIXDC1Q155Q3 683 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 PROX2Q3B8N5 592 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 TXNDC2Q86VQ3 553 aa6.31□□□□□ -1.4
PTPN12-206ENST00000435495 CLSTN1O94985 981 aa6.3□□□□□ -1.4
PTPN12-206ENST00000435495 TAGLNQ01995 201 aaKnown RBP6.3□□□□□ -1.4
PTPN12-206ENST00000435495 FDX1P10109 184 aa6.3□□□□□ -1.4
PTPN12-206ENST00000435495 FGD1P98174 961 aa6.3□□□□□ -1.4
PTPN12-206ENST00000435495 IER5LQ5T953 404 aa6.3□□□□□ -1.4
PTPN12-206ENST00000435495 L3MBTL3Q96JM7 780 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-206ENST00000435495 LGR5O75473 907 aa6.29□□□□□ -1.4
PTPN12-206ENST00000435495 TMEM134Q9H6X4 195 aa6.29□□□□□ -1.4
PTPN12-206ENST00000435495 ZNF526Q8TF50 670 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-206ENST00000435495 MRRFQ96E11 262 aaKnown RBP6.29□□□□□ -1.4
PTPN12-206ENST00000435495 ZBTB3Q9H5J0 574 aa6.29□□□□□ -1.4
PTPN12-206ENST00000435495 PRDM16Q9HAZ2 1276 aa6.29□□□□□ -1.4
PTPN12-206ENST00000435495 SLC10A3P09131 477 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 ARSIQ5FYB1 569 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 IGSF5Q9NSI5 407 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 PNMA3Q9UL41 463 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 AMOTL2Q9Y2J4 779 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 CRTC2Q53ET0 693 aaPredicted RBP6.28□□□□□ -1.4
PTPN12-206ENST00000435495 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 PKNOX2Q96KN3 472 aa6.28□□□□□ -1.4
PTPN12-206ENST00000435495 CADPSQ9ULU8 1353 aa6.27□□□□□ -1.41
PTPN12-206ENST00000435495 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-206ENST00000435495 KANK4Q5T7N3 995 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-206ENST00000435495 PRM3Q9NNZ6 103 aa6.27□□□□□ -1.41
PTPN12-206ENST00000435495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.27□□□□□ -1.41
PTPN12-206ENST00000435495 HAX1O00165 279 aa6.27□□□□□ -1.41
PTPN12-206ENST00000435495 ATG7O95352 703 aa6.27□□□□□ -1.41
PTPN12-206ENST00000435495 DNAJC14Q6Y2X3 702 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-206ENST00000435495 A0A0U1RQG5 324 aaPredicted RBP6.26□□□□□ -1.41
PTPN12-206ENST00000435495 C6orf229H3BNL8 230 aa6.26□□□□□ -1.41
PTPN12-206ENST00000435495 FUT2Q10981 343 aa6.26□□□□□ -1.41
PTPN12-206ENST00000435495 SULF1Q8IWU6 871 aa6.26□□□□□ -1.41
PTPN12-206ENST00000435495 CERKQ8TCT0 537 aa6.26□□□□□ -1.41
PTPN12-206ENST00000435495 RBM27Q9P2N5 1060 aaKnown RBP6.26□□□□□ -1.41
PTPN12-206ENST00000435495 DNAJB2P25686 324 aa6.25□□□□□ -1.41
PTPN12-206ENST00000435495 MTMR2Q13614 643 aa6.25□□□□□ -1.41
PTPN12-206ENST00000435495 WASHC4Q2M389 1173 aa6.25□□□□□ -1.41
PTPN12-206ENST00000435495 TUSC1Q2TAM9 212 aa6.25□□□□□ -1.41
PTPN12-206ENST00000435495 FAM174AQ8TBP5 190 aa6.25□□□□□ -1.41
PTPN12-206ENST00000435495 TATDN2Q93075 761 aa6.25□□□□□ -1.41
PTPN12-206ENST00000435495 FBXO45P0C2W1 286 aa6.24□□□□□ -1.41
PTPN12-206ENST00000435495 KCNH2Q12809 1159 aa6.24□□□□□ -1.41
PTPN12-206ENST00000435495 ZNF16P17020 682 aaPredicted RBP6.24□□□□□ -1.41
PTPN12-206ENST00000435495 SEMA3FQ13275 785 aa6.24□□□□□ -1.41
PTPN12-206ENST00000435495 SEPT9Q9UHD8 586 aaPredicted RBP6.24□□□□□ -1.41
PTPN12-206ENST00000435495 PRPF38BQ5VTL8 546 aaKnown RBP6.23□□□□□ -1.41
PTPN12-206ENST00000435495 HELBQ8NG08 1087 aaPredicted RBP6.23□□□□□ -1.41
PTPN12-206ENST00000435495 GIPC2Q8TF65 315 aa6.23□□□□□ -1.41
PTPN12-206ENST00000435495 NOVA2Q9UNW9 492 aaKnown RBP6.23□□□□□ -1.41
PTPN12-206ENST00000435495 GCGRP47871 477 aa6.23□□□□□ -1.41
PTPN12-206ENST00000435495 GAS2L2Q8NHY3 880 aa6.23□□□□□ -1.41
PTPN12-206ENST00000435495 ANO2Q9NQ90 1003 aa6.23□□□□□ -1.41
PTPN12-206ENST00000435495 LHX6Q9UPM6 363 aa6.23□□□□□ -1.41
PTPN12-206ENST00000435495 SOCS7O14512 581 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 ATP9BO43861 1147 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 GNEQ9Y223 722 aaKnown RBP6.22□□□□□ -1.41
PTPN12-206ENST00000435495 RBM47A0AV96 593 aaKnown RBP6.22□□□□□ -1.41
PTPN12-206ENST00000435495 USP17L3A6NCW0 530 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 USP17L4A6NCW7 530 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 PUS10Q3MIT2 529 aaKnown RBP6.22□□□□□ -1.41
PTPN12-206ENST00000435495 USP17L2Q6R6M4 530 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 USP17L1Q7RTZ2 530 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 SPATA32Q96LK8 384 aa6.22□□□□□ -1.41
PTPN12-206ENST00000435495 FAM69CQ0P6D2 419 aa6.21□□□□□ -1.42
PTPN12-206ENST00000435495 ZNF594Q96JF6 807 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-206ENST00000435495 METRNQ9UJH8 293 aa6.21□□□□□ -1.42
PTPN12-206ENST00000435495 PATL2C9JE40 543 aaKnown RBP6.21□□□□□ -1.42
PTPN12-206ENST00000435495 MTMR3Q13615 1198 aa6.21□□□□□ -1.42
PTPN12-206ENST00000435495 BCL2L13Q9BXK5 485 aa6.2□□□□□ -1.42
PTPN12-206ENST00000435495 GJA5P36382 358 aa6.2□□□□□ -1.42
PTPN12-206ENST00000435495 NCOA4Q13772 614 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms