RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
LINC01007-201ENST00000434537 ERVK-7P63135 1459 aa12.54□□□□□ -0.4
LINC01007-201ENST00000434537 MYO3AQ8NEV4 1616 aa12.54□□□□□ -0.4
LINC01007-201ENST00000434537 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
LINC01007-201ENST00000434537 MYOM1P52179 1685 aa12.54□□□□□ -0.4
LINC01007-201ENST00000434537 RALBP1Q15311 655 aa12.54□□□□□ -0.4
LINC01007-201ENST00000434537 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
LINC01007-201ENST00000434537 KDM5AP29375 1690 aaKnown RBP12.53□□□□□ -0.4
LINC01007-201ENST00000434537 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
LINC01007-201ENST00000434537 TMEM132EQ6IEE7 984 aa12.52□□□□□ -0.41
LINC01007-201ENST00000434537 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
LINC01007-201ENST00000434537 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
LINC01007-201ENST00000434537 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
LINC01007-201ENST00000434537 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
LINC01007-201ENST00000434537 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
LINC01007-201ENST00000434537 CC2D1BQ5T0F9 858 aaKnown RBP12.51□□□□□ -0.41
LINC01007-201ENST00000434537 QRICH2Q9H0J4 1663 aa12.5□□□□□ -0.41
LINC01007-201ENST00000434537 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
LINC01007-201ENST00000434537 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
LINC01007-201ENST00000434537 CENPJQ9HC77 1338 aaPredicted RBP12.49□□□□□ -0.41
LINC01007-201ENST00000434537 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
LINC01007-201ENST00000434537 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
LINC01007-201ENST00000434537 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
LINC01007-201ENST00000434537 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
LINC01007-201ENST00000434537 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
LINC01007-201ENST00000434537 NEFLP07196 543 aa12.48□□□□□ -0.41
LINC01007-201ENST00000434537 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
LINC01007-201ENST00000434537 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
LINC01007-201ENST00000434537 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
LINC01007-201ENST00000434537 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
LINC01007-201ENST00000434537 ASXL1Q8IXJ9 1541 aa12.46□□□□□ -0.41
LINC01007-201ENST00000434537 ZNF142P52746 1687 aaPredicted RBP12.46□□□□□ -0.41
LINC01007-201ENST00000434537 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.42
LINC01007-201ENST00000434537 KNSTRNQ9Y448 316 aa12.46□□□□□ -0.42
LINC01007-201ENST00000434537 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.42
LINC01007-201ENST00000434537 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
LINC01007-201ENST00000434537 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
LINC01007-201ENST00000434537 UBAP1LF5GYI3 381 aa12.44□□□□□ -0.42
LINC01007-201ENST00000434537 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
LINC01007-201ENST00000434537 CEP170BQ9Y4F5 1589 aaPredicted RBP12.44□□□□□ -0.42
LINC01007-201ENST00000434537 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
LINC01007-201ENST00000434537 STK26Q9P289 416 aa12.41□□□□□ -0.42
LINC01007-201ENST00000434537 ALKQ9UM73 1620 aa12.41□□□□□ -0.42
LINC01007-201ENST00000434537 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
LINC01007-201ENST00000434537 RBM19Q9Y4C8 960 aaKnown RBP12.41□□□□□ -0.42
LINC01007-201ENST00000434537 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
LINC01007-201ENST00000434537 SAFB2Q14151 953 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01007-201ENST00000434537 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
LINC01007-201ENST00000434537 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
LINC01007-201ENST00000434537 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
LINC01007-201ENST00000434537 RIMS2Q9UQ26 1411 aa12.4□□□□□ -0.43
LINC01007-201ENST00000434537 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
LINC01007-201ENST00000434537 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
LINC01007-201ENST00000434537 YTHDC2Q9H6S0 1430 aaKnown RBP12.39□□□□□ -0.43
LINC01007-201ENST00000434537 NPC1L1Q9UHC9 1359 aa12.39□□□□□ -0.43
LINC01007-201ENST00000434537 SETD1AO15047 1707 aaKnown RBP12.38□□□□□ -0.43
LINC01007-201ENST00000434537 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
LINC01007-201ENST00000434537 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
LINC01007-201ENST00000434537 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
LINC01007-201ENST00000434537 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
LINC01007-201ENST00000434537 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
LINC01007-201ENST00000434537 TNRQ92752 1358 aa12.37□□□□□ -0.43
LINC01007-201ENST00000434537 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
LINC01007-201ENST00000434537 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
LINC01007-201ENST00000434537 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
LINC01007-201ENST00000434537 UBR1Q8IWV7 1749 aa12.35□□□□□ -0.43
LINC01007-201ENST00000434537 CABP2Q9NPB3 220 aa12.35□□□□□ -0.43
LINC01007-201ENST00000434537 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
LINC01007-201ENST00000434537 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
LINC01007-201ENST00000434537 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
LINC01007-201ENST00000434537 MINK1Q8N4C8 1332 aaPredicted RBP12.33□□□□□ -0.44
LINC01007-201ENST00000434537 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
LINC01007-201ENST00000434537 PUS7Q96PZ0 661 aaKnown RBP12.33□□□□□ -0.44
LINC01007-201ENST00000434537 POGKQ9P215 609 aa12.33□□□□□ -0.44
LINC01007-201ENST00000434537 CPS1P31327 1500 aa12.33□□□□□ -0.44
LINC01007-201ENST00000434537 HSPA1LP34931 641 aa12.32□□□□□ -0.44
LINC01007-201ENST00000434537 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
LINC01007-201ENST00000434537 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
LINC01007-201ENST00000434537 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
LINC01007-201ENST00000434537 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC01007-201ENST00000434537 NUDCQ9Y266 331 aa12.32□□□□□ -0.44
LINC01007-201ENST00000434537 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
LINC01007-201ENST00000434537 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
LINC01007-201ENST00000434537 ADAMTS8Q9UP79 889 aa12.31□□□□□ -0.44
LINC01007-201ENST00000434537 INSRP06213 1382 aa12.31□□□□□ -0.44
LINC01007-201ENST00000434537 ANKRD36BQ8N2N9 1353 aa12.31□□□□□ -0.44
LINC01007-201ENST00000434537 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 WAPLQ7Z5K2 1190 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 METP08581 1390 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 TOM1O60784 492 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 PLEKHH1Q9ULM0 1364 aa12.3□□□□□ -0.44
LINC01007-201ENST00000434537 WDR43Q15061 677 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC01007-201ENST00000434537 NLRP1Q9C000 1473 aa12.29□□□□□ -0.44
LINC01007-201ENST00000434537 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
LINC01007-201ENST00000434537 ATAD2Q6PL18 1390 aa12.28□□□□□ -0.44
LINC01007-201ENST00000434537 ABCC11Q96J66 1382 aa12.28□□□□□ -0.44
LINC01007-201ENST00000434537 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
LINC01007-201ENST00000434537 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms