RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 MTHFSP49914 203 aa15.72■□□□□ 0.11
SEMA3F-206ENST00000434342 WWC1Q8IX03 1113 aa15.72■□□□□ 0.11
SEMA3F-206ENST00000434342 FRAT2O75474 233 aaPredicted RBP15.72■□□□□ 0.11
SEMA3F-206ENST00000434342 CD109Q6YHK3 1445 aa15.72■□□□□ 0.11
SEMA3F-206ENST00000434342 PNNQ9H307 717 aaKnown RBP15.72■□□□□ 0.11
SEMA3F-206ENST00000434342 KDM2BQ8NHM5 1336 aa15.71■□□□□ 0.11
SEMA3F-206ENST00000434342 RRP9O43818 475 aaKnown RBP15.71■□□□□ 0.11
SEMA3F-206ENST00000434342 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
SEMA3F-206ENST00000434342 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
SEMA3F-206ENST00000434342 COG6Q9Y2V7 657 aa15.71■□□□□ 0.11
SEMA3F-206ENST00000434342 CFAP65Q6ZU64 1925 aaKnown RBP15.71■□□□□ 0.11
SEMA3F-206ENST00000434342 TRMT2AQ8IZ69 625 aaKnown RBP15.71■□□□□ 0.1
SEMA3F-206ENST00000434342 PANK1Q8TE04 598 aa15.71■□□□□ 0.1
SEMA3F-206ENST00000434342 TCP11L2Q8N4U5 519 aa15.7■□□□□ 0.1
SEMA3F-206ENST00000434342 CEP152O94986 1710 aa15.7■□□□□ 0.1
SEMA3F-206ENST00000434342 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
SEMA3F-206ENST00000434342 NPATQ14207 1427 aa15.69■□□□□ 0.1
SEMA3F-206ENST00000434342 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
SEMA3F-206ENST00000434342 NKTRP30414 1462 aaKnown RBP15.68■□□□□ 0.1
SEMA3F-206ENST00000434342 U2AF1L5P0DN76 240 aaPredicted RBP15.68■□□□□ 0.1
SEMA3F-206ENST00000434342 U2AF1Q01081 240 aaKnown RBP eCLIP15.68■□□□□ 0.1
SEMA3F-206ENST00000434342 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
SEMA3F-206ENST00000434342 VWDEQ8N2E2 1590 aa15.68■□□□□ 0.1
SEMA3F-206ENST00000434342 CFAP53Q96M91 514 aa15.68■□□□□ 0.1
SEMA3F-206ENST00000434342 ABCA9Q8IUA7 1624 aa15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 MYOM2P54296 1465 aa15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 VGFO15240 615 aaPredicted RBP15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 PDIA4P13667 645 aaKnown RBP15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 RUNDC1Q96C34 613 aa15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 MAP3K4Q9Y6R4 1608 aa15.67■□□□□ 0.1
SEMA3F-206ENST00000434342 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 ABCA6Q8N139 1617 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 IGHDP01880 384 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 IDI1Q13907 227 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 KDM5AP29375 1690 aaKnown RBP15.66■□□□□ 0.1
SEMA3F-206ENST00000434342 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
SEMA3F-206ENST00000434342 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
SEMA3F-206ENST00000434342 ARID3AQ99856 593 aa15.65■□□□□ 0.1
SEMA3F-206ENST00000434342 DDRGK1Q96HY6 314 aa15.64■□□□□ 0.09
SEMA3F-206ENST00000434342 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
SEMA3F-206ENST00000434342 GGNBP2Q9H3C7 697 aa15.63■□□□□ 0.09
SEMA3F-206ENST00000434342 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
SEMA3F-206ENST00000434342 SBNO2Q9Y2G9 1366 aa15.63■□□□□ 0.09
SEMA3F-206ENST00000434342 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
SEMA3F-206ENST00000434342 PPRC1Q5VV67 1664 aaKnown RBP15.62■□□□□ 0.09
SEMA3F-206ENST00000434342 C8orf34Q49A92 452 aa15.62■□□□□ 0.09
SEMA3F-206ENST00000434342 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
SEMA3F-206ENST00000434342 MINK1Q8N4C8 1332 aaPredicted RBP15.62■□□□□ 0.09
SEMA3F-206ENST00000434342 MYOM1P52179 1685 aa15.62■□□□□ 0.09
SEMA3F-206ENST00000434342 KIDINS220Q9ULH0 1771 aa15.61■□□□□ 0.09
SEMA3F-206ENST00000434342 POGKQ9P215 609 aa15.61■□□□□ 0.09
SEMA3F-206ENST00000434342 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
SEMA3F-206ENST00000434342 POGZQ7Z3K3 1410 aa15.61■□□□□ 0.09
SEMA3F-206ENST00000434342 PDE3AQ14432 1141 aa15.61■□□□□ 0.09
SEMA3F-206ENST00000434342 RARSP54136 660 aaKnown RBP15.6■□□□□ 0.09
SEMA3F-206ENST00000434342 KIF1BO60333 1816 aa15.6■□□□□ 0.09
SEMA3F-206ENST00000434342 NRXN1Q9ULB1 1477 aa15.58■□□□□ 0.08
SEMA3F-206ENST00000434342 MROH2AA6NES4 1674 aa15.58■□□□□ 0.08
SEMA3F-206ENST00000434342 RLBP1P12271 317 aa15.57■□□□□ 0.08
SEMA3F-206ENST00000434342 FBXO31Q5XUX0 539 aaPredicted RBP15.57■□□□□ 0.08
SEMA3F-206ENST00000434342 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
SEMA3F-206ENST00000434342 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
SEMA3F-206ENST00000434342 ADGRB3O60242 1522 aa15.56■□□□□ 0.08
SEMA3F-206ENST00000434342 KIAA1210Q9ULL0 1709 aa15.56■□□□□ 0.08
SEMA3F-206ENST00000434342 WDR63Q8IWG1 891 aa15.56■□□□□ 0.08
SEMA3F-206ENST00000434342 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
SEMA3F-206ENST00000434342 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
SEMA3F-206ENST00000434342 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
SEMA3F-206ENST00000434342 LMTK2Q8IWU2 1503 aa15.55■□□□□ 0.08
SEMA3F-206ENST00000434342 PCDHB15Q9Y5E8 787 aa15.54■□□□□ 0.08
SEMA3F-206ENST00000434342 FTSJ3Q8IY81 847 aaKnown RBP15.54■□□□□ 0.08
SEMA3F-206ENST00000434342 ANKRD36BQ8N2N9 1353 aa15.53■□□□□ 0.08
SEMA3F-206ENST00000434342 SLC52A1Q9NWF4 448 aa15.53■□□□□ 0.08
SEMA3F-206ENST00000434342 MAPK8IP3Q9UPT6 1336 aa15.53■□□□□ 0.08
SEMA3F-206ENST00000434342 FBLN1P23142 703 aa15.53■□□□□ 0.08
SEMA3F-206ENST00000434342 NEURL4Q96JN8 1562 aa15.53■□□□□ 0.08
SEMA3F-206ENST00000434342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
SEMA3F-206ENST00000434342 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
SEMA3F-206ENST00000434342 MLECQ14165 292 aa15.52■□□□□ 0.08
SEMA3F-206ENST00000434342 CHMP4BQ9H444 224 aaKnown RBP15.52■□□□□ 0.08
SEMA3F-206ENST00000434342 TERF2IPQ9NYB0 399 aa15.52■□□□□ 0.08
SEMA3F-206ENST00000434342 FRMPD1Q5SYB0 1578 aa15.52■□□□□ 0.07
SEMA3F-206ENST00000434342 ABCC3O15438 1527 aa15.52■□□□□ 0.07
SEMA3F-206ENST00000434342 ADGRB1O14514 1584 aa15.52■□□□□ 0.07
SEMA3F-206ENST00000434342 SEC24BO95487 1268 aa15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 SMC4Q9NTJ3 1288 aa15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 PRDM4Q9UKN5 801 aa15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 FYB1O15117 783 aa15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
SEMA3F-206ENST00000434342 CABP1Q9NZU7 370 aa15.5■□□□□ 0.07
SEMA3F-206ENST00000434342 PMFBP1Q8TBY8 1022 aa15.5■□□□□ 0.07
SEMA3F-206ENST00000434342 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
SEMA3F-206ENST00000434342 PANK2Q9BZ23 570 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms